Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq596 248 1e-60 seq154 150 3e-31 seq236 147 3e-30 seq1280 113 7e-20 >seq596 Length=46163 Score = 248 bits (274), Expect = 1e-60 Identities = 576/854 (67%), Gaps = 26/854 (3%) Strand=Plus/Minus Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097 ||||| | || || |||||||| || ||||| |||||| |||| |||||| || |||| | Sbjct 3313 AGGCTGAAGCTTCATTTTGGACAGTGGAAGAAGTCGATTTGTCAAAGGACATGAACGACT 3254 Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTG 125157 || | | |||| || || ||||| | ||||| || || || |||||||||| | Sbjct 3253 GGAACAAC---TTGAAGGACACCGAGCGTCATTTTATCTCCCATGTTCTGGCCTTCTTCG 3197 Query 125158 CCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACC 125216 | | ||||| || ||||| ||||| || || ||||| ||| ||| || || || | Sbjct 3196 CAGCTTCCGACGGCATCGTTAACGAGAACCTCGTTGA-ACGGTTCAGCCAGGAAGTG-CA 3139 Query 125217 ATTC-CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGA 125275 | || |||||| ||||| || || ||||| ||| || || || || ||||| || Sbjct 3138 AGTCACAGAGGCCCGTTGCTTCTATGGCTTCCAGATCGCCATGGAAAATGTCCACTCCGA 3079 Query 125276 AATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTC 125333 |||||||| || ||||| | |||||| | || | ||| | | || | || Sbjct 3078 GATGTACTCGCTTCTCATTGAAACCTACATTAGAGA--CTCAAAGGAGCGCGACTTCCTT 3021 Query 125334 TTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGG 125393 || ||||| |||| | | |||| | || ||||||||| | |||| | ||| Sbjct 3020 TTCAACGCCGTCGAGAATCTACCGTGTGTAAAGAAAAAGGCTGACTGGGCCTTGGACTGG 2961 Query 125394 ATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGC 125453 |||| | ||| || | | || | | | || || || || || || || Sbjct 2960 ATCGCCAGCACAAAGGCTAACTTTGGAGAACGCATTATCGCCTTTGCTGCTGTCGAAGGA 2901 Query 125454 ATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCC 125513 || ||||| || || ||||| | ||||| ||||||||||||||||| | ||||| Sbjct 2900 ATTTTCTTCAGCGGAAGCTTTGCCTCAATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCA 2841 Query 125514 GGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573 || || || | ||||| | || || || ||||||||| | |||||||||||||| Sbjct 2840 GGTCTCACCTTCTCAAACGAACTCATCTCACGTGACGAGGGCTTGCACTGTGACTTTGCT 2781 Query 125574 ATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAG-GTCAT 125632 || |||| | || |||| | | || | ||| | | | || | || || Sbjct 2780 TGCCTGATGTTCAG--AC-ATCTT-GAACAGA------AGCCACCAAAGGAACGCGTTAT 2731 Query 125633 CAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGT 125692 | | || | | || || || | ||| |||||||||||||| ||||| |||| ||| Sbjct 2730 CGAGATCATCTCAGAGGCTGTAAAGATTGAACAAGAGTTTCTGACCGACGCCCTTCCGTG 2671 Query 125693 CAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCG 125752 | |||| | |||||||||||| ||||||| || ||||| ||||| ||||| ||||| Sbjct 2670 CGACATGCTCGGCATGAACTGCGGACTAATGTCTGAATACATCGAGTTCGTGGCCGATCG 2611 Query 125753 TCTACTGTACGAGTT--GATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTC 125810 ||| |||| |||| | || | | | ||||| ||||| |||| |||||||| ||| Sbjct 2610 TCTTCTGTCCGAGCTTGGAGTTG--GAAAGATCTACAATACCAAAAATCCCTTCTCCTTC 2553 Query 125811 ATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870 ||| || || || ||||| ||||| || || ||||||||||| || | || ||| Sbjct 2552 ATGGAATCGATCTCGCTCGAGGGAAAGACGAATTTCTTCGAGAAGAAAGTGGGAGAATAC 2493 Query 125871 AAACGCTACGGTGT 125884 || | |||||| Sbjct 2492 CAAAAGTCCGGTGT 2479 >seq154 Length=135386 Score = 150 bits (166), Expect = 3e-31 Identities = 262/376 (70%), Gaps = 4/376 (1%) Strand=Plus/Minus Query 70151 GGTGTTGATCAATTGCAGACAATCATTGACACTC-TCAAGACCAATCCAACAGATAGGAG 70209 |||||||| || ||| || |||||||| || | | || || ||||||| || | | Sbjct 90819 GGTGTTGACCAGTTGAAGGACATCATTGA-ACGCATAAAAACTAATCCAAACGACCGTCG 90761 Query 70210 GATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCA 70269 || | || || | ||||| || || | | | ||||||||| | || || ||||| Sbjct 90760 CATTATTTTGAGCGCTTGGAACCCAGCTCAGGTTCCCCAAATGGCTTTGCCGCCTTGTCA 90701 Query 70270 CTGTTTGGCTCAGTTTTAC-TCGTACGATGGCAAATTGTCATGCTTAATGTATCAGAGGA 70328 |||| |||||||||| ||| ||| | || || || | ||| | | || || | Sbjct 90700 CTGTCTGGCTCAGTTCTACGTCGCA-GACGGTGAACTCAGCTGCCAATTATACCAACGAT 90642 Query 70329 GTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACA 70388 |||||||||||||| || || ||||| |||||||| || || | | ||| ||| Sbjct 90641 CAGCCGACATGGGCCTTGGAGTTCCCTTCAACATTGCGTCTTACGCTCTTCTCACGAACA 90582 Query 70389 TGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTC 70448 |||||||||| | || | ||||| || || ||| | ||| | | || ||| | | Sbjct 90581 TGATTGCTCATGTCACGAACTTGAAACCGGGTGATTTCATCCACGCTCTCGGAGACACGC 90522 Query 70449 ACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTT 70508 |||| || ||||||||||||||||| || |||| ||| || || || |||||||||| | Sbjct 90521 ACGTCTACTTAAATCACATCGAGCCTTTGAAGGGGCAGCTTGACCGCAAGCCGAGACCGT 90462 Query 70509 TTCCCAAGCTGGAGTT 70524 | || ||||| |||| Sbjct 90461 TCCCACAGCTGAAGTT 90446 >seq236 Length=103937 Score = 147 bits (162), Expect = 3e-30 Identities = 377/572 (66%), Gaps = 14/572 (2%) Strand=Plus/Minus Query 127102 TTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTC 127161 |||||| | |||||||| || || | |||||||| | ||||||||||| || || | Sbjct 64456 TTGCGGAAGAAGATGACGCCCGCCCTTGGACCTCTCAATGTCTTGTGCGTCGTGGTCGAG 64397 Query 127162 ACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAATG 127221 || | ||| || || || || ||||||| | | || | | || | ||| Sbjct 64396 ACGACGTCGGCGTATTCGAAAGGCGATGGAATGATTCCAGCAGCGACGAGACCAGAGATG 64337 Query 127222 TGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCTA 127281 || || || || || | ||| | | ||| | ||| | ||| || |||||||| | Sbjct 64336 TGGGCCATGTCAGCGAACAGGTAAGCTCCGTTTTGATCAGAAATGTCACGGAATCGCTTG 64277 Query 127282 TAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAGA 127341 ||||| | || ||| || ||| || || ||||| | | | || ||||| || Sbjct 64276 TAGTCGAGGCAACGACTGTAACAAGACACTCCCGCGATGATGACCTTGGGCTTGAAGAGC 64217 Query 127342 TTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGTAC 127401 | ||| | || | || || | ||||||| ||||| || |||| |||||||| Sbjct 64216 CTCGCAGTTTCTTCGAGCTTTTCGTAGTCGATTAGTCCGGTGCTTGGATTGACCTTGTAT 64157 Query 127402 GGCATGCTTTCGAAAAAGAGTGATGTAGCGGACAC------GTTGCG------GAATCCG 127449 ||||| |||||| | | || || || || | |||| | ||| ||| Sbjct 64156 GGCATTGATTCGAAGTAAATGGAAGTGGCAGAGATTCGTTTGTTGGGTGTCATGAAGCCG 64097 Query 127450 TGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAACG 127509 || |||| || || |||||||| ||||| | |||||||| | | |||| |||| || Sbjct 64096 TGAGTCAAATGACCGCCGTCGGGAAGATCCAAGCCCATGATGCGATCGTGAGGTTGAAGC 64037 Query 127510 ATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTCCC 127569 | || ||||||||||| |||||||| || || || ||||| || ||| |||||| Sbjct 64036 AGCCCGGTGTACACGGCGAAGTTGGCTGGTGATCCTGAATACGGCTGGACATTGACTCCC 63977 Query 127570 CATTCGGACTCGTTCAA-ATTGAACGCTCTGAGACATCGCTGCTGTGCTAGCAGTTCGAT 127628 |||| | | | |||| ||| | || ||| |||||| || || || | |||||| Sbjct 63976 CATT-GTTCCGGATCAAGTTTGTAGGCCTCCAGAGATCGCTTTTGAGCAAGAATTTCGAT 63918 Query 127629 GCGATCGATAAACTCGTTACCACCATAGTATC 127660 ||||||| |||| ||| || ||||| |||| Sbjct 63917 CTGATCGATGAACTGGTTCCCGCCATAATATC 63886 >seq1280 Length=9399 Score = 113 bits (124), Expect = 7e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 98040 TACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGT 98099 |||||||| ||||||||||| | |||||||| |||| | ||||| ||||| | ||| Sbjct 3049 TACAAGACCGTCTGGGAGATGTCAGTCAAGACGCAGATCCAGATGGCAGCCGATCGCGGT 3108 Query 98100 GTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGT 98159 | | ||| || ||| || || ||||| || |||| |||||||| | |||| | Sbjct 3109 GCGTTCATCGATCAGTCGCAGTCATTCAACGTGCACGTCGCCGAGCCAAACTACGGAAAA 3168 Query 98160 ATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTG 98219 |||| || || ||||| ||| ||||| | |||| | ||||| || ||||||||| || Sbjct 3169 CTGACGTCAATTCACTTCCACGGCTGGAAAATGGGCTTGAAGACCGGAATGTACTATTTG 3228 Query 98220 AGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261 | || ||| | || |||| || || | || || || ||| Sbjct 3229 CGCACCAAGCCAGCTGCCAACGCAATTCAGTTCACAGTCGAC 3270 Score = 95.1 bits (104), Expect = 2e-14 Identities = 315/489 (64%), Gaps = 6/489 (1%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || ||||| || || || ||||| ||| | || | || | || || ||||||| ||| Sbjct 1870 CAAGGCGGAAACAAGCGACCAGGTGCTTTCGCAATTTATCTCGAGCCGTGGCACGGCGAC 1929 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| | |||||| ||||| ||||| | || || | ||| Sbjct 1930 GTCTTCGAGTTCCTCGATCTCAAGAAAAACACTGGCAAAGAAGAAGTTCGTGCTCGTGAC 1989 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGGC 97052 |||| || || | ||| | || |||||||||||| ||||| | | |||| | Sbjct 1990 ATGTTCTACGCTTTGTGGATTCCCGATTTGTTCATGCGTCGCGTTGAAAGCAACGGAG-- 2047 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||| | ||||| || || | || || || | ||| | |||||||||||| Sbjct 2048 -TCTGGTCGTTGATGTGTCCGCACAGCTGTCCAGGCCTCTACGACTCGTGGGGCGAAGAG 2106 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCA 97172 || ||| |||| | ||||| || ||||| ||| | | | || | || Sbjct 2107 TTCGAGAAGTTGTACGAGAGATACGAAGCCGAAGGCCGTTACCTCCGCCAGATCAAGGCT 2166 Query 97173 CGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTC 97232 | ||| ||||| |||||| | | | || || |||||||| || || ||||| | Sbjct 2167 CAAGACTTGTGGTTTGCCATCATCGAGTCACAAGTCGAGACTGGCACGCCTTACATGTTG 2226 Query 97233 TACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCC 97292 |||||||| | || || || ||||| | || | |||||||| ||||| Sbjct 2227 TACAAGGACGCTTGCAACCGAAAGTCGAACCAGCAGAACGTCGGCACCATTCGTTGCTCC 2286 Query 97293 AATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTG 97352 || ||||||||||||| | ||||| || |||||| || || ||| |||| Sbjct 2287 AACTTGTGCACGGAAATCATCGAGTATTCCAGCAAGGACGAAGTCGCCGTCTGCAATCTG 2346 Query 97353 GCATCGGTC 97361 |||||| || Sbjct 2347 GCATCGATC 2355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741012911589720