Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq596 248 1e-60
seq154 150 3e-31
seq236 147 3e-30
seq1280 113 7e-20
>seq596
Length=46163
Score = 248 bits (274), Expect = 1e-60
Identities = 576/854 (67%), Gaps = 26/854 (3%)
Strand=Plus/Minus
Query 125038 AGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATT 125097
||||| | || || |||||||| || ||||| |||||| |||| |||||| || |||| |
Sbjct 3313 AGGCTGAAGCTTCATTTTGGACAGTGGAAGAAGTCGATTTGTCAAAGGACATGAACGACT 3254
Query 125098 GGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTG 125157
|| | | |||| || || ||||| | ||||| || || || |||||||||| |
Sbjct 3253 GGAACAAC---TTGAAGGACACCGAGCGTCATTTTATCTCCCATGTTCTGGCCTTCTTCG 3197
Query 125158 CCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACC 125216
| | ||||| || ||||| ||||| || || ||||| ||| ||| || || || |
Sbjct 3196 CAGCTTCCGACGGCATCGTTAACGAGAACCTCGTTGA-ACGGTTCAGCCAGGAAGTG-CA 3139
Query 125217 ATTC-CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGA 125275
| || |||||| ||||| || || ||||| ||| || || || || ||||| ||
Sbjct 3138 AGTCACAGAGGCCCGTTGCTTCTATGGCTTCCAGATCGCCATGGAAAATGTCCACTCCGA 3079
Query 125276 AATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAAC--ACATGCTC 125333
|||||||| || ||||| | |||||| | || | ||| | | || | ||
Sbjct 3078 GATGTACTCGCTTCTCATTGAAACCTACATTAGAGA--CTCAAAGGAGCGCGACTTCCTT 3021
Query 125334 TTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGG 125393
|| ||||| |||| | | |||| | || ||||||||| | |||| | |||
Sbjct 3020 TTCAACGCCGTCGAGAATCTACCGTGTGTAAAGAAAAAGGCTGACTGGGCCTTGGACTGG 2961
Query 125394 ATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGC 125453
|||| | ||| || | | || | | | || || || || || || ||
Sbjct 2960 ATCGCCAGCACAAAGGCTAACTTTGGAGAACGCATTATCGCCTTTGCTGCTGTCGAAGGA 2901
Query 125454 ATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCC 125513
|| ||||| || || ||||| | ||||| ||||||||||||||||| | |||||
Sbjct 2900 ATTTTCTTCAGCGGAAGCTTTGCCTCAATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCA 2841
Query 125514 GGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCC 125573
|| || || | ||||| | || || || ||||||||| | ||||||||||||||
Sbjct 2840 GGTCTCACCTTCTCAAACGAACTCATCTCACGTGACGAGGGCTTGCACTGTGACTTTGCT 2781
Query 125574 ATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAG-GTCAT 125632
|| |||| | || |||| | | || | ||| | | | || | || ||
Sbjct 2780 TGCCTGATGTTCAG--AC-ATCTT-GAACAGA------AGCCACCAAAGGAACGCGTTAT 2731
Query 125633 CAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGT 125692
| | || | | || || || | ||| |||||||||||||| ||||| |||| |||
Sbjct 2730 CGAGATCATCTCAGAGGCTGTAAAGATTGAACAAGAGTTTCTGACCGACGCCCTTCCGTG 2671
Query 125693 CAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCG 125752
| |||| | |||||||||||| ||||||| || ||||| ||||| ||||| |||||
Sbjct 2670 CGACATGCTCGGCATGAACTGCGGACTAATGTCTGAATACATCGAGTTCGTGGCCGATCG 2611
Query 125753 TCTACTGTACGAGTT--GATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTC 125810
||| |||| |||| | || | | | ||||| ||||| |||| |||||||| |||
Sbjct 2610 TCTTCTGTCCGAGCTTGGAGTTG--GAAAGATCTACAATACCAAAAATCCCTTCTCCTTC 2553
Query 125811 ATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870
||| || || || ||||| ||||| || || ||||||||||| || | || |||
Sbjct 2552 ATGGAATCGATCTCGCTCGAGGGAAAGACGAATTTCTTCGAGAAGAAAGTGGGAGAATAC 2493
Query 125871 AAACGCTACGGTGT 125884
|| | ||||||
Sbjct 2492 CAAAAGTCCGGTGT 2479
>seq154
Length=135386
Score = 150 bits (166), Expect = 3e-31
Identities = 262/376 (70%), Gaps = 4/376 (1%)
Strand=Plus/Minus
Query 70151 GGTGTTGATCAATTGCAGACAATCATTGACACTC-TCAAGACCAATCCAACAGATAGGAG 70209
|||||||| || ||| || |||||||| || | | || || ||||||| || | |
Sbjct 90819 GGTGTTGACCAGTTGAAGGACATCATTGA-ACGCATAAAAACTAATCCAAACGACCGTCG 90761
Query 70210 GATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCA 70269
|| | || || | ||||| || || | | | ||||||||| | || || |||||
Sbjct 90760 CATTATTTTGAGCGCTTGGAACCCAGCTCAGGTTCCCCAAATGGCTTTGCCGCCTTGTCA 90701
Query 70270 CTGTTTGGCTCAGTTTTAC-TCGTACGATGGCAAATTGTCATGCTTAATGTATCAGAGGA 70328
|||| |||||||||| ||| ||| | || || || | ||| | | || || |
Sbjct 90700 CTGTCTGGCTCAGTTCTACGTCGCA-GACGGTGAACTCAGCTGCCAATTATACCAACGAT 90642
Query 70329 GTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACA 70388
|||||||||||||| || || ||||| |||||||| || || | | ||| |||
Sbjct 90641 CAGCCGACATGGGCCTTGGAGTTCCCTTCAACATTGCGTCTTACGCTCTTCTCACGAACA 90582
Query 70389 TGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTC 70448
|||||||||| | || | ||||| || || ||| | ||| | | || ||| | |
Sbjct 90581 TGATTGCTCATGTCACGAACTTGAAACCGGGTGATTTCATCCACGCTCTCGGAGACACGC 90522
Query 70449 ACGTGTATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTT 70508
|||| || ||||||||||||||||| || |||| ||| || || || |||||||||| |
Sbjct 90521 ACGTCTACTTAAATCACATCGAGCCTTTGAAGGGGCAGCTTGACCGCAAGCCGAGACCGT 90462
Query 70509 TTCCCAAGCTGGAGTT 70524
| || ||||| ||||
Sbjct 90461 TCCCACAGCTGAAGTT 90446
>seq236
Length=103937
Score = 147 bits (162), Expect = 3e-30
Identities = 377/572 (66%), Gaps = 14/572 (2%)
Strand=Plus/Minus
Query 127102 TTGCGGTAAAAGATGACTCCGGCTCGAGGACCTCTGAGAGTCTTGTGCGTTGTAGTGGTC 127161
|||||| | |||||||| || || | |||||||| | ||||||||||| || || |
Sbjct 64456 TTGCGGAAGAAGATGACGCCCGCCCTTGGACCTCTCAATGTCTTGTGCGTCGTGGTCGAG 64397
Query 127162 ACAATGTCACAATACTCAAAGGGGCCAGGAATGACTTTGCCCGCAATCAAGCCCGCAATG 127221
|| | ||| || || || || ||||||| | | || | | || | |||
Sbjct 64396 ACGACGTCGGCGTATTCGAAAGGCGATGGAATGATTCCAGCAGCGACGAGACCAGAGATG 64337
Query 127222 TGTGCAATATCGGCCATCAGCAAGGAGCCGGCTGCATCGGCAATCTCTCGGAATCGTCTA 127281
|| || || || || | ||| | | ||| | ||| | ||| || |||||||| |
Sbjct 64336 TGGGCCATGTCAGCGAACAGGTAAGCTCCGTTTTGATCAGAAATGTCACGGAATCGCTTG 64277
Query 127282 TAGTCCAAGCGCCGAGGATAGCAACTGGTGCCGGCTATGATTAGCCTAGGTTTGAATAGA 127341
||||| | || ||| || ||| || || ||||| | | | || ||||| ||
Sbjct 64276 TAGTCGAGGCAACGACTGTAACAAGACACTCCCGCGATGATGACCTTGGGCTTGAAGAGC 64217
Query 127342 TTGGCACTCTCGGCAAGTTTGGCATAGTCGACGAGTCCAGTCTGAGGATCCACCTTGTAC 127401
| ||| | || | || || | ||||||| ||||| || |||| ||||||||
Sbjct 64216 CTCGCAGTTTCTTCGAGCTTTTCGTAGTCGATTAGTCCGGTGCTTGGATTGACCTTGTAT 64157
Query 127402 GGCATGCTTTCGAAAAAGAGTGATGTAGCGGACAC------GTTGCG------GAATCCG 127449
||||| |||||| | | || || || || | |||| | ||| |||
Sbjct 64156 GGCATTGATTCGAAGTAAATGGAAGTGGCAGAGATTCGTTTGTTGGGTGTCATGAAGCCG 64097
Query 127450 TGCGTCAGGTGGCCTCCGTCGGGCAGATCGAGTCCCATGATTCTACCGTGCGGTTTAACG 127509
|| |||| || || |||||||| ||||| | |||||||| | | |||| |||| ||
Sbjct 64096 TGAGTCAAATGACCGCCGTCGGGAAGATCCAAGCCCATGATGCGATCGTGAGGTTGAAGC 64037
Query 127510 ATTCCAGTGTACACGGCAAAGTTGGCCATCGAGCCCGAGTACGGTTGTACACACACTCCC 127569
| || ||||||||||| |||||||| || || || ||||| || ||| ||||||
Sbjct 64036 AGCCCGGTGTACACGGCGAAGTTGGCTGGTGATCCTGAATACGGCTGGACATTGACTCCC 63977
Query 127570 CATTCGGACTCGTTCAA-ATTGAACGCTCTGAGACATCGCTGCTGTGCTAGCAGTTCGAT 127628
|||| | | | |||| ||| | || ||| |||||| || || || | ||||||
Sbjct 63976 CATT-GTTCCGGATCAAGTTTGTAGGCCTCCAGAGATCGCTTTTGAGCAAGAATTTCGAT 63918
Query 127629 GCGATCGATAAACTCGTTACCACCATAGTATC 127660
||||||| |||| ||| || ||||| ||||
Sbjct 63917 CTGATCGATGAACTGGTTCCCGCCATAATATC 63886
>seq1280
Length=9399
Score = 113 bits (124), Expect = 7e-20
Identities = 158/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 98040 TACAAGACTGTCTGGGAGATTCCGACCAAGACGCTGATCGATATGGCTGCCGACAGAGGT 98099
|||||||| ||||||||||| | |||||||| |||| | ||||| ||||| | |||
Sbjct 3049 TACAAGACCGTCTGGGAGATGTCAGTCAAGACGCAGATCCAGATGGCAGCCGATCGCGGT 3108
Query 98100 GTCTACATTGACCAGAGTCAATCGTTCAATCTGTACGTTGCCGAGCCCACCTACAGTCGT 98159
| | ||| || ||| || || ||||| || |||| |||||||| | |||| |
Sbjct 3109 GCGTTCATCGATCAGTCGCAGTCATTCAACGTGCACGTCGCCGAGCCAAACTACGGAAAA 3168
Query 98160 ATGACTTCGATACACTTTTACGCATGGAACAAGGGCCTCAAGACGGGCATGTACTATCTG 98219
|||| || || ||||| ||| ||||| | |||| | ||||| || ||||||||| ||
Sbjct 3169 CTGACGTCAATTCACTTCCACGGCTGGAAAATGGGCTTGAAGACCGGAATGTACTATTTG 3228
Query 98220 AGAACAAAGTCGGCCACCAATGCCATACCATTTACGGTGGAC 98261
| || ||| | || |||| || || | || || || |||
Sbjct 3229 CGCACCAAGCCAGCTGCCAACGCAATTCAGTTCACAGTCGAC 3270
Score = 95.1 bits (104), Expect = 2e-14
Identities = 315/489 (64%), Gaps = 6/489 (1%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
|| ||||| || || || ||||| ||| | || | || | || || ||||||| |||
Sbjct 1870 CAAGGCGGAAACAAGCGACCAGGTGCTTTCGCAATTTATCTCGAGCCGTGGCACGGCGAC 1929
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || |||| | |||||| ||||| ||||| | || || | |||
Sbjct 1930 GTCTTCGAGTTCCTCGATCTCAAGAAAAACACTGGCAAAGAAGAAGTTCGTGCTCGTGAC 1989
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGGC 97052
|||| || || | ||| | || |||||||||||| ||||| | | |||| |
Sbjct 1990 ATGTTCTACGCTTTGTGGATTCCCGATTTGTTCATGCGTCGCGTTGAAAGCAACGGAG-- 2047
Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112
|||| | ||||| || || | || || || | ||| | ||||||||||||
Sbjct 2048 -TCTGGTCGTTGATGTGTCCGCACAGCTGTCCAGGCCTCTACGACTCGTGGGGCGAAGAG 2106
Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCA 97172
|| ||| |||| | ||||| || ||||| ||| | | | || | ||
Sbjct 2107 TTCGAGAAGTTGTACGAGAGATACGAAGCCGAAGGCCGTTACCTCCGCCAGATCAAGGCT 2166
Query 97173 CGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTC 97232
| ||| ||||| |||||| | | | || || |||||||| || || ||||| |
Sbjct 2167 CAAGACTTGTGGTTTGCCATCATCGAGTCACAAGTCGAGACTGGCACGCCTTACATGTTG 2226
Query 97233 TACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCC 97292
|||||||| | || || || ||||| | || | |||||||| |||||
Sbjct 2227 TACAAGGACGCTTGCAACCGAAAGTCGAACCAGCAGAACGTCGGCACCATTCGTTGCTCC 2286
Query 97293 AATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTG 97352
|| ||||||||||||| | ||||| || |||||| || || ||| ||||
Sbjct 2287 AACTTGTGCACGGAAATCATCGAGTATTCCAGCAAGGACGAAGTCGCCGTCTGCAATCTG 2346
Query 97353 GCATCGGTC 97361
|||||| ||
Sbjct 2347 GCATCGATC 2355
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741012911589720
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