Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq596 129 5e-25 >seq596 Length=46163 Score = 129 bits (142), Expect = 5e-25 Identities = 366/556 (66%), Gaps = 6/556 (1%) Strand=Plus/Plus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 ||||| | ||||||| || ||||| ||||||||||| || || || | || || Sbjct 2761 AGATGTCTGAACATCAGGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGT 2820 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 |||||||| || || ||||| ||||| | || || || || | ||| || || | ||| Sbjct 2821 TCGTTTGAGAAGGTGAGACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCA 2880 Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATAC 13312 || || || || |||||||| || || ||||| || || | | ||| ||| | Sbjct 2881 AAGCTTCCGCTGAAGAAAATTCCTTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAG 2940 Query 13313 GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTG-CTTTTTGTTTA-ACGCAGT 13370 || ||| | || | ||||| | |||||||| | |||||| |||| || | || Sbjct 2941 TTAGCCTTTGTGCTGGCGATCCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGT 3000 Query 13371 TCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTAT 13430 | ||| || | ||||| || | | | ||||| |||| ||| || || | Sbjct 3001 --AGATTCTCGACGGCGTTGAAAAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTT 3058 Query 13431 CTATCAATAAGCTA-TACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAA 13489 | || | |||| | ||||| || || || | ||||||||| || || ||||| ||||| Sbjct 3059 CAAT-GAGAAGCGAGTACATCTCGGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAG 3117 Query 13490 AAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTA 13549 || || | ||||||| || || ||||| | || | ||| | | ||| |||||| Sbjct 3118 AAGCAACGGGCCTCTGTGACTTGCACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTA 3177 Query 13550 ACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTT 13609 || || ||||| ||| || || || || || | || ||||| | ||| | Sbjct 3178 ACGATGCCGTCGGAAGCTGCGAAGAAGGCCAGAACATGGGAGATAAAATGACGCTCGGTG 3237 Query 13610 TCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAA 13669 || ||| || ||| || | || ||||| ||||| || || || || |||||| Sbjct 3238 TCCTTCAAGTTGTTCCAGTCGTTCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAA 3297 Query 13670 AAAGAAGCAACAGCCT 13685 || ||||| |||||| Sbjct 3298 AATGAAGCTTCAGCCT 3313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430956152767794