Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq596 129 5e-25
>seq596
Length=46163
Score = 129 bits (142), Expect = 5e-25
Identities = 366/556 (66%), Gaps = 6/556 (1%)
Strand=Plus/Plus
Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192
||||| | ||||||| || ||||| ||||||||||| || || || | || ||
Sbjct 2761 AGATGTCTGAACATCAGGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGT 2820
Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252
|||||||| || || ||||| ||||| | || || || || | ||| || || | |||
Sbjct 2821 TCGTTTGAGAAGGTGAGACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCA 2880
Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATAC 13312
|| || || || |||||||| || || ||||| || || | | ||| ||| |
Sbjct 2881 AAGCTTCCGCTGAAGAAAATTCCTTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAG 2940
Query 13313 GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTG-CTTTTTGTTTA-ACGCAGT 13370
|| ||| | || | ||||| | |||||||| | |||||| |||| || | ||
Sbjct 2941 TTAGCCTTTGTGCTGGCGATCCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGT 3000
Query 13371 TCATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTAT 13430
| ||| || | ||||| || | | | ||||| |||| ||| || || |
Sbjct 3001 --AGATTCTCGACGGCGTTGAAAAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTT 3058
Query 13431 CTATCAATAAGCTA-TACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAA 13489
| || | |||| | ||||| || || || | ||||||||| || || ||||| |||||
Sbjct 3059 CAAT-GAGAAGCGAGTACATCTCGGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAG 3117
Query 13490 AAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTA 13549
|| || | ||||||| || || ||||| | || | ||| | | ||| ||||||
Sbjct 3118 AAGCAACGGGCCTCTGTGACTTGCACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTA 3177
Query 13550 ACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTT 13609
|| || ||||| ||| || || || || || | || ||||| | ||| |
Sbjct 3178 ACGATGCCGTCGGAAGCTGCGAAGAAGGCCAGAACATGGGAGATAAAATGACGCTCGGTG 3237
Query 13610 TCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAA 13669
|| ||| || ||| || | || ||||| ||||| || || || || ||||||
Sbjct 3238 TCCTTCAAGTTGTTCCAGTCGTTCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAA 3297
Query 13670 AAAGAAGCAACAGCCT 13685
|| ||||| ||||||
Sbjct 3298 AATGAAGCTTCAGCCT 3313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430956152767794
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |