Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq596 107 4e-18
seq496 96.9 8e-15
seq1975 91.5 3e-13
>seq596
Length=46163
Score = 107 bits (118), Expect = 4e-18
Identities = 360/549 (66%), Gaps = 31/549 (6%)
Strand=Plus/Minus
Query 268752 AGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATT 268811
|||| | ||||| |||||||| || |||||||| ||| |||| | ||| | | || |
Sbjct 3313 AGGCTGAAGCTTCATTTTGGACAGTGGAAGAAGTCGATTTGTCAAAGGACATGAACGACT 3254
Query 268812 GGAAAAATTTAAA----ACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTT 268867
|||| || || || ||| || | ||||| || || |||| || || ||
Sbjct 3253 GGAACAACTTGAAGGACACC----GAGCGTCATTTTATCTCCCATGTTCTGGCCTTCTTC 3198
Query 268868 GCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAG 268927
|||| | || || ||||||||||| || || || || |||| | || || || ||
Sbjct 3197 GCAGCTTCCGACGGCATCGTTAACGAGAACCTCGTTGAACGGTTCAGCCAGGAAGTGCAA 3138
Query 268928 ATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAG 268987
| | || ||| | || || || || |||||||| || || |||||| | || || |||
Sbjct 3137 GTCACAGAGGCCCGTTGCTTCTATGGCTTCCAGATCGCCATGGAAAATGTCCACTCCGAG 3078
Query 268988 ATGTACAGTCTATTAATAGATACTTATA-TAGATGATAACAACGAAAAGAAAAGACT--A 269044
|||||| || | || || || || | |||| || ||| | | | ||||
Sbjct 3077 ATGTACTCGCTTCTCATTGAAACCTACATTAGA-GA-CTCAAAGGAGCG---CGACTTCC 3023
Query 269045 TTTT---CTTCTATGAGAA-CTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAA 269100
|||| | | ||||| ||| | ||||| | ||||| |||| ||||| || |
Sbjct 3022 TTTTCAACGCCGTCGAGAATCTACCG--TGTGTAAAGAAAAAGGCTGACTGGGCCTTGGA 2965
Query 269101 ATGGATAAACGATAGCGC---GCCTTAC---GGAGAAAGGTTAGTTGCTTTTGCCGCTGT 269154
||||| || ||| | | || || |||||| | | | || ||||| |||||
Sbjct 2964 CTGGAT---CGCCAGCACAAAGGCTAACTTTGGAGAACGCATTATCGCCTTTGCTGCTGT 2908
Query 269155 AGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCT 269214
||||| || ||||| || |||||| | ||||| ||| | ||||| | || |
Sbjct 2907 CGAAGGAATTTTCTTCAGCGGAAGCTTTGCCTCAATCTTCTGGCTCAAGAAGCGCGGTTT 2848
Query 269215 TATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGA 269274
|||||||| | || ||||| |||||| | || | ||||| || || ||||| ||
Sbjct 2847 GATGCCAGGTCTCACCTTCTCAAACGAACTCATCTCACGTGACGAGGGCTTGCACTGTGA 2788
Query 269275 CTTCGCTTG 269283
||| |||||
Sbjct 2787 CTTTGCTTG 2779
>seq496
Length=57215
Score = 96.9 bits (106), Expect = 8e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 238625 AGGCAAAATGCATAGTTTCTTACGAATGTATTGGGCTAAAAAGATACTTGAATGGACTAG 238684
|||||||||||| ||||| | |||||||| ||||| || ||||| || || ||||
Sbjct 40612 AGGCAAAATGCACGGTTTCCTTCGAATGTACTGGGCCAAGAAGATCCTCGAGTGGATGTC 40671
Query 238685 ATCTCCAAAGGAAGCTCTTAGATATAGTATTTATCTGAACGATAAATACGAACTCGACGG 238744
| | ||| | ||||||||| | ||| || || |||||| ||| | | |||||
Sbjct 40672 AACGCCAGATGAAGCTCTTGCCACTGCTATCTACCTCAACGATCGCTACAACTTGGACGG 40731
Query 238745 TACG-GATCCTAACGGATACGTAGGTTGTATGTGGTCAATATGTGGATTACACGATAGGG 238803
||| ||||| ||||||||||| || || |||||| || | ||| | ||||| | ||
Sbjct 40732 -ACGTGATCCAAACGGATACGTCGGATGCATGTGGAGCATTGGAGGAATTCACGACATGG 40790
Query 238804 CATGGTCTGAGAGACCTATATTTGGAAAAGTTAGATACATGAATTATGAAGG 238855
||| || || | |||| || || | || || ||||| || |||||
Sbjct 40791 GCTGGAAAGAACGAGATGTATTCGGCAAGATCAGGTATATGAACTACGAAGG 40842
>seq1975
Length=2172
Score = 91.5 bits (100), Expect = 3e-13
Identities = 116/160 (73%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 104331 TTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAG 104390
|||| || | || | ||| || | || | ||| ||||||||||| || || |||||
Sbjct 1985 TTCCTCCACGGAGACGAAGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGC 2044
Query 104391 ATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAG 104450
| || | ||| ||||| || || ||||||||||| || | | ||| || || || |
Sbjct 2045 TCAAGGTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGG 2104
Query 104451 GTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTC 104490
| |||||||| |||||||| |||||||| || || || ||
Sbjct 2105 GGATTCCTTCCTTATCCTGGATCTTTGCCTTAACGTTCTC 2144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151324682796876
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |