Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_005336.1
Length=139962
Score E
Sequences producing significant alignments: (Bits) Value
seq564 125 6e-24
>seq564
Length=50347
Score = 125 bits (138), Expect = 6e-24
Identities = 179/250 (72%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 5249 CCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTAACCTCTTGAACTGCTGGG 5308
||||||||| | |||||| | ||||||| |||| || || |||| ||| | |||
Sbjct 9827 CCGAATCCACCGGTGCCGCGTTTGGTGTCGCTCAAGTCCTTGACTTCTTCAACCACCGGG 9886
Query 5309 TGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTTAACCTCAAAGTCG 5368
| | ||||| |||||||| || ||||| || | ||| ||||| | |||| ||
Sbjct 9887 TAGAAGATGCGCTCGCATATCAGTTGAGCGATGCGGTCGCCCTTGGCGATAGCAAACTCA 9946
Query 5369 CTGTTTCCGAAG--TTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAA 5426
|| |||| || |||| || || || || || || |||||||||||||| || |
Sbjct 9947 ACGT--CCGAGTGATTGAACAAGACGACACCAACGTTTCCGCGGTAGTCTTCGTCAATGA 10004
Query 5427 CGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTC 5486
|||| ||||| || |||||||||| ||||| || | ||| |||||||| || | ||| |
Sbjct 10005 CGCCGGCGCCGACATCGATAAAGTTCTTGACGGCTAAGCCAGAACGTGGAGCAACGCGGC 10064
Query 5487 CGTAGCAACC 5496
| ||||| ||
Sbjct 10065 CATAGCAGCC 10074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 447722432390640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |