Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq564 114 1e-20
>seq564
Length=50347
Score = 114 bits (126), Expect = 1e-20
Identities = 141/191 (74%), Gaps = 4/191 (2%)
Strand=Plus/Plus
Query 5581 GCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCC 5640
||||||||| ||||| || || || ||||||||| | | | || || || ||
Sbjct 9895 GCGCTCGCATATCAGTTGAGCGATGCGGTCGCCCTTGGCGATAGCAAACTCAACGT--CC 9952
Query 5641 GAAG--TTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCG 5698
|| ||||||| || || || ||||| ||||||||||| |||| || ||||| |||
Sbjct 9953 GAGTGATTGAACAAGACGACACCAACGTTTCCGCGGTAGTCTTCGTCAATGACGCCGGCG 10012
Query 5699 CCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCAC 5758
|| || ||||| |||| |||||| || | ||| || || ||||| |||||||| |||||
Sbjct 10013 CCGACATCGATAAAGTTCTTGACGGCTAAGCCAGAACGTGGAGCAACGCGGCCATAGCAG 10072
Query 5759 CCATCGGGAAG 5769
|| || |||||
Sbjct 10073 CCTTCCGGAAG 10083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430028209283864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |