Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq29 118 1e-21
seq108 102 7e-17
>seq29
Length=258594
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | || || |||||||| | ||| || ||||||| ||| ||| |||
Sbjct 96631 ACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCTTCC 96572
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
| || |||||| | ||||| |||| ||||| ||||| ||||| ||||||||||| |
Sbjct 96571 AATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGG 96512
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || |||||||| ||| |||||| | | || || || | || ||||||||
Sbjct 96511 ATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTTTTA 96452
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATG 95008
|| || | ||||| || ||||| ||||||
Sbjct 96451 CCCGTCAATGTTTTGACGAAGATTTGCATG 96422
>seq108
Length=162490
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | || || ||||| || | ||| || ||||||| ||| || ||
Sbjct 111855 ACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCA 111914
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || || | ||||| | | ||||||||||||||||| ||||| ||||| |
Sbjct 111915 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGG 111974
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || |||||||| | | ||||| | | ||||| || | |||||||| ||
Sbjct 111975 ATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTCTTG 112034
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || |||||||| ||||| |||||
Sbjct 112035 CCGGTGAGGGTTTTCACGAAGATTTGCAT 112063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448263198610920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |