Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq29 118 1e-21 seq108 102 7e-17 >seq29 Length=258594 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || || |||||||| | ||| || ||||||| ||| ||| ||| Sbjct 96631 ACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCTTCC 96572 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | || |||||| | ||||| |||| ||||| ||||| ||||| ||||||||||| | Sbjct 96571 AATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGG 96512 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || |||||||| ||| |||||| | | || || || | || |||||||| Sbjct 96511 ATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTTTTA 96452 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 || || | ||||| || ||||| |||||| Sbjct 96451 CCCGTCAATGTTTTGACGAAGATTTGCATG 96422 >seq108 Length=162490 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || || ||||| || | ||| || ||||||| ||| || || Sbjct 111855 ACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCA 111914 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || | ||||| | | ||||||||||||||||| ||||| ||||| | Sbjct 111915 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGG 111974 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || |||||||| | | ||||| | | ||||| || | |||||||| || Sbjct 111975 ATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTCTTG 112034 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || |||||||| ||||| ||||| Sbjct 112035 CCGGTGAGGGTTTTCACGAAGATTTGCAT 112063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448263198610920