Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1280 226 4e-54 seq596 201 1e-46 >seq1280 Length=9399 Score = 226 bits (250), Expect = 4e-54 Identities = 843/1302 (65%), Gaps = 36/1302 (3%) Strand=Plus/Minus Query 62567 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG-CTAGTTCACAACTCGCCTCTA 62625 ||||||| | || || ||||| | || || ||| | | ||||||||||| ||||| | Sbjct 2688 CGATCCTTCGTAGGTTTCGTAAGTACCGAGCT-CTCTGGCGAGTTCACAACTTGCCTCAA 2630 Query 62626 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTA- 62684 || ||||| || || || |||||||||| || || || | ||||| | ||| | Sbjct 2629 GCGCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTT-GGCGAC 2571 Query 62685 TCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATA 62744 || || |||||| | | || || ||||| || | ||||||| || |||||||| Sbjct 2570 TCGAACGGATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATC 2511 Query 62745 GGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATA 62804 || | ||| | | | || || | ||| ||||| || || || || || | ||| || Sbjct 2510 GGGCGATGACGCATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATG 2451 Query 62805 ATTTTATTGAGATT---TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC- 62860 || || || | || | ||||| | ||| || ||||| || || | || || Sbjct 2450 ATCTTGTTCAAGTTCTTTGTGACAGTC---TTGGTGACTTCCTTGAGCTTTTGGAAGTCG 2394 Query 62861 -AAATC---GCCCATCTATT-ACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACG 62915 || || || || || ||||||||||| | || | ||||||||||| || ||| Sbjct 2393 TAAGTCTTGGCTGATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACG 2334 Query 62916 GCTACCTCATTAGCATCC--GCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGA 62973 || || || | | | | | ||| | || || || ||||| | || || | Sbjct 2333 GCGACTTCGTC--CTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAA 2276 Query 62974 TAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATG 63033 | || || | || || || || |||| ||| || || ||||| || | ||| | | Sbjct 2275 TGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAG 2216 Query 63034 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTA 63093 | || ||||| || | || || || || || || ||| | | || ||||||| || Sbjct 2215 GCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGATCT 2156 Query 63094 TAGATTTGTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCC 63153 ||| | | ||| ||||||| ||||| |||||||| || |||| Sbjct 2155 GGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCCCC 2096 Query 63154 AAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCT 63213 | | || | || ||||| | |||||||||||||||||| |||||| | | Sbjct 2095 ACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTTG-CTT 2037 Query 63214 TCA-CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTA 63272 ||| | || ||| || | ||| |||||||| | ||| || | || | | | | Sbjct 2036 TCAACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGA 1977 Query 63273 TGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCAC 63332 ||| || || || || || || || |||||||||||| | | | || |||||| Sbjct 1976 ACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCAC 1917 Query 63333 GGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTA 63392 || || | || || || | | | || || || |||||||| || || |||| || | | Sbjct 1916 GGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGA 1857 Query 63393 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCG 63452 |||||||| || ||||| | ||||||||||| || |||||||| || || ||||| ||| Sbjct 1856 GCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCCG 1797 Query 63453 GAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCA 63510 | |||||| |||| |||| ||||| | | | ||| | ||| || || || ||| Sbjct 1796 GCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTG--ACACCGATACCGCCAGCCG 1739 Query 63511 TTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGA 63570 || ||| || |||||| |||| | ||| || || || || || || |||||| Sbjct 1738 ACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATCGG 1679 Query 63571 TCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAG 63629 ||| | || || ||||| || | || | ||| || | || || | Sbjct 1678 ACATCGACAACAAG-AAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAGA 1620 Query 63630 GTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAG 63689 || || || || || || || | |||||| | || ||||| |||||||| || ||| Sbjct 1619 GTTGGCGAGGCATGGGTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCGAG 1560 Query 63690 TCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63745 || || || |||| |||| || || || || | ||| | |||||| || || | Sbjct 1559 TCGATGTCTTCACCATGGATG----CCCACGGCAACTCTCATGAGCATGTGTTGCGGGCG 1504 Query 63746 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805 || |||||||| || | |||| ||||||| |||||||| || || || || Sbjct 1503 CTCGGCGATCTTGCCTTTGTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCGAA 1444 Query 63806 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63847 || ||||| ||||| || ||||| || || | ||||| Sbjct 1443 GTAATTGTAGCCGAAGTCGCGGTCGTAGATGATGGCAGAGTT 1402 >seq596 Length=46163 Score = 201 bits (222), Expect = 1e-46 Identities = 550/834 (66%), Gaps = 19/834 (2%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 ||||||||||| ||||| || ||||| ||||| || ||||| || | || || | Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 |||||||| || ||||| | ||| || || ||| || ||| | || || | Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA-G 33191 | | ||| || ||||| || || ||| ||| | | | || ||||| || | | | Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667 Query 33192 TTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 | || ||||| || | || ||||| ||||||||||| ||| || |||| || || Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726 Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAAT---AAATGTTTAAACATCAAACATGC 33308 ||||| ||| | | ||||| | | | | |||| | ||||||| || || Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783 Query 33309 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 33368 || || ||||||| |||||||| | || |||||||| || || ||||| || || Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843 Query 33369 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCC 33428 ||| | || ||||| || ||||| || || || || || ||| ||||| ||||| Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903 Query 33429 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCA----TAACC--GGCGCTGTCATGTAT 33482 ||| || ||||||||||| |||| | |||||| || || | |||| | || Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGC---GAT 2960 Query 33483 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 33542 ||| | ||||| || ||||| || |||||||| || | | || | ||| || || Sbjct 2961 CCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAA 3020 Query 33543 GAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTC 33602 || ||| || || ||| ||| || || || || | ||| ||||| || Sbjct 3021 AAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTC 3080 Query 33603 CGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 33662 || || | ||||| ||||| ||||| || || ||||| || | ||||| || | || Sbjct 3081 GGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTG 3140 Query 33663 TACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 33722 ||||| | || ||||| | | || || || || || ||||| ||||| || Sbjct 3141 CACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAA 3200 Query 33723 AAACGCCAATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTAGTTTATTCCAATCAT 33781 || |||| ||||| ||||||| | | || | | | | || ||||| || | Sbjct 3201 GAAGGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCT-TCAAGTTGTTCCAGTCGT 3259 Query 33782 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835 | || || || || | ||| ||||||||||||||||||||||| || || |||| Sbjct 3260 TCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGCCT 3313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622908289160520