Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 196 1e-44
seq154 109 1e-18
>seq1280
Length=9399
Score = 196 bits (216), Expect = 1e-44
Identities = 901/1415 (64%), Gaps = 32/1415 (2%)
Strand=Plus/Plus
Query 363744 CGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802
|||||| | ||||| ||| || || || ||||| ||| | ||||| | |||| || |
Sbjct 1797 CGGCACCAACGGGAT-CTCAAACGGACTTGTTCCAATGTTGCGTGTTTACAACAACACCG 1855
Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862
| | || || ||||| || ||| ||||| ||| || || || || ||||||||||
Sbjct 1856 CTCGCTATGTAGACCAAGGCGGAAACAAGCGACCAGGTGCTTTCGCAATTTATCTCGAGC 1915
Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922
| || | ||| | || ||||| || || ||| ||||||||| || ||||| |||
Sbjct 1916 CGTGGCACGGCGACGTCTTCGAGTTCCTCGATCTCAAGAAAAACACTGGCAAAGAAGAAG 1975
Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982
| ||||| ||||| ||||||| || | ||| || | || || ||| ||||| |
Sbjct 1976 TTCGTGCTCGTGACATGTTCTACGCTTTGTGGATTCCCGATTTGTTCATGCGTCGCGTTG 2035
Query 363983 AGGCAGGTAA--GAAT-TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039
| | | || || | ||||| | | || || ||| |||||||| || | |||
Sbjct 2036 A---AAGCAACGGAGTCTGGTCGTTGATGTGTCCGCACAGCTGTCCAGGCCTCTACGACT 2092
Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099
||||| || || | | | ||||| | || ||| | || || | | |
Sbjct 2093 CGTGGGGCGAAGAGTTCGAGAAGTTGTACGAGAGATACGAAGCCGAAGGCC-GTTACCTC 2151
Query 364100 AGACAATTCCCG-CACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158
| || || | | || | | |||||||||||||| || || || | ||||| ||
Sbjct 2152 CGCCAGATCAAGGCTCAAGACTTGTGGTTTGCCATCATCGAGTCACAAGTCGAGACTGGC 2211
Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218
|| || || ||||||||||| || | |||||||| ||||| ||||||||| || | ||
Sbjct 2212 ACGCCTTACATGTTGTACAAGGACGCTTGCAACCGAAAGTCGAACCAGCAGAACGTCGGC 2271
Query 364219 ACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278
|| |||| |||| | || || || || || || || || |||||
Sbjct 2272 ACCATTCGTTGCTCCAACTTGTGCACGGAAATCATCGAGTATTCCAGCAAGGACGAAGTC 2331
Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAG-ATGGT-----ACT 364332
||||| || || || || |||||||| | |||||| || | || |||
Sbjct 2332 GCCGTCTGCAATCTGGCATCGATCGCTGTCAACATGTTTGTGAACGCATCAGCCAAGACT 2391
Query 364333 TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTT 364392
| ||| ||| | || | || || ||| | || || || | ||||| |
Sbjct 2392 TACGACTTCCAAAAGCTCAAGGAAGTCACCAAGACTGTCACAAAGAACTTGAACAAGATC 2451
Query 364393 ATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCG 364452
||||| || || || || || || || || |||| || || |||||||||||||||
Sbjct 2452 ATCGATGTCAACTACTACCCGATCCCAGAGGCTAAGCGATCGAACATGCGTCATCGCCCG 2511
Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512
|| ||| | || | || ||||| || |||| ||| || | | | | | || ||
Sbjct 2512 ATCGGTATCGGCATTCAAGGCCTGGCCGACGCTTTCATCACGATGAGTTATCCGTTCGAG 2571
Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572
||||| |||| | || || || ||||||| || || || || | | ||| |
Sbjct 2572 TCGCCAAACGCACAGAAGCTGAACCAGCAGATCTTCGAGACGATCTACTACGGCGCGCTT 2631
Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632
|| ||||| | || | | || | ||| || || || || || ||
Sbjct 2632 GAGGCAAGTTGTGAACTCGCCAGAGAGCTCGGTACTTACGAAACCTACGAAGGATCGCCG 2691
Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692
| ||| | |||| || |||| || | ||| | || ||| | | ||| ||
Sbjct 2692 GTGTCGAAAGGAATCTTGCAGTACGACATGTGGGAAAAGACACCAACCAACTTGTGGGAC 2751
Query 364693 TGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTCCCTCGTT 364746
|||| | || || | ||||| |||| || ||||| || || |
Sbjct 2752 TGGGCTGTCCTG------AAGGCTAAGATCGCCGAGCACGGAGTGCGCAATTCACTTCTC 2805
Query 364747 ACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAA 364806
|| || ||||| || ||||| ||||||||||| ||||| |||||||| |||||||
Sbjct 2806 CTCGCTCCAATGCCGACTGCTTCGACTGCACAGATTCTCGGCAACAACGAAAGCTTCGAG 2865
Query 364807 CCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAAT 364866
|||| || ||||| | || ||||| || ||||||||||| | | || |||
Sbjct 2866 CCGTACACCAGCAACGTCTACAACCGCCGCACGCTGAGCGGAGAATTTCAGATCGTCAAT 2925
Query 364867 AAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTAT 364926
| | || |||||||||| |||| || | || |||| ||| |||||||||| |
Sbjct 2926 CACCATCTCATCAAGGATCTCACCGAACGAGATCTCTGGGACGACGACATGAAGAACGAG 2985
Query 364927 ATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGA-TTTCCAGAAGATCTGAAGCC 364985
|||||||| || || || || ||||||| || || | | || | || | ||
Sbjct 2986 ATCATCGCTAGCAACGGATCAGTTCAGAACA-TCGAGAAGATCCCCGCCGA-CATCCGCG 3043
Query 364986 TATT-TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATC 365044
|| ||||| ||||| ||||| || || | || | || | ||||| |||||||
Sbjct 3044 AGTTGTACAAGACCGTCTGGGAGATGTCAGTCAAGACGCAGATCCAGATGGCAGCCGATC 3103
Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104
||||||| || ||| |||| ||||| || ||||| | | | |||||| || ||
Sbjct 3104 GCGGTGCGTTCATCGATCAGTCGCAGTCATTCAACGTGCACGTCGCCGAGCCAAACTACG 3163
Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139
|| || || || || || ||| |||| ||||||
Sbjct 3164 GAAAACTGACGTCAATTCACTTCCACGGCTGGAAA 3198
>seq154
Length=135386
Score = 109 bits (120), Expect = 1e-18
Identities = 186/268 (69%), Gaps = 4/268 (1%)
Strand=Plus/Minus
Query 111627 CGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCA 111686
|||||||||||| |||| || ||||||||| | | ||||||| | || ||
Sbjct 90765 CGTCGCATTATTTTGAGCGCTTGGAACCCAGCTCAGGTTCCCCAAATGGCTTTGCCGCCT 90706
Query 111687 TGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCA--TGCCAAATGTATC 111744
||||| | || ||||| || || ||||| || ||| |||||| | || |
Sbjct 90705 TGTCACTGTCTGGCTCAGTTCTACGTCGCAGACGG--TGAACTCAGCTGCCAATTATACC 90648
Query 111745 AGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTA 111804
| ||||| || || || || ||||| ||||| || || ||||| |||||| || || |
Sbjct 90647 AACGATCAGCCGACATGGGCCTTGGAGTTCCCTTCAACATTGCGTCTTACGCTCTTCTCA 90588
Query 111805 CTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAG 111864
| | | || |||||| | || || | ||||||||||| ||||| |||| | ||||||
Sbjct 90587 CGAACATGATTGCTCATGTCACGAACTTGAAACCGGGTGATTTCATCCACGCTCTCGGAG 90528
Query 111865 ATGCGCATGTTTACACAAACCACATTGA 111892
| |||| || ||| ||| ||||| ||
Sbjct 90527 ACACGCACGTCTACTTAAATCACATCGA 90500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303270154007654
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |