Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1280 196 1e-44 seq154 109 1e-18 >seq1280 Length=9399 Score = 196 bits (216), Expect = 1e-44 Identities = 901/1415 (64%), Gaps = 32/1415 (2%) Strand=Plus/Plus Query 363744 CGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTG 363802 |||||| | ||||| ||| || || || ||||| ||| | ||||| | |||| || | Sbjct 1797 CGGCACCAACGGGAT-CTCAAACGGACTTGTTCCAATGTTGCGTGTTTACAACAACACCG 1855 Query 363803 CGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGC 363862 | | || || ||||| || ||| ||||| ||| || || || || |||||||||| Sbjct 1856 CTCGCTATGTAGACCAAGGCGGAAACAAGCGACCAGGTGCTTTCGCAATTTATCTCGAGC 1915 Query 363863 CTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAAT 363922 | || | ||| | || ||||| || || ||| ||||||||| || ||||| ||| Sbjct 1916 CGTGGCACGGCGACGTCTTCGAGTTCCTCGATCTCAAGAAAAACACTGGCAAAGAAGAAG 1975 Query 363923 TGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG 363982 | ||||| ||||| ||||||| || | ||| || | || || ||| ||||| | Sbjct 1976 TTCGTGCTCGTGACATGTTCTACGCTTTGTGGATTCCCGATTTGTTCATGCGTCGCGTTG 2035 Query 363983 AGGCAGGTAA--GAAT-TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATG 364039 | | | || || | ||||| | | || || ||| |||||||| || | ||| Sbjct 2036 A---AAGCAACGGAGTCTGGTCGTTGATGTGTCCGCACAGCTGTCCAGGCCTCTACGACT 2092 Query 364040 TATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099 ||||| || || | | | ||||| | || ||| | || || | | | Sbjct 2093 CGTGGGGCGAAGAGTTCGAGAAGTTGTACGAGAGATACGAAGCCGAAGGCC-GTTACCTC 2151 Query 364100 AGACAATTCCCG-CACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 | || || | | || | | |||||||||||||| || || || | ||||| || Sbjct 2152 CGCCAGATCAAGGCTCAAGACTTGTGGTTTGCCATCATCGAGTCACAAGTCGAGACTGGC 2211 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 || || || ||||||||||| || | |||||||| ||||| ||||||||| || | || Sbjct 2212 ACGCCTTACATGTTGTACAAGGACGCTTGCAACCGAAAGTCGAACCAGCAGAACGTCGGC 2271 Query 364219 ACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACT 364278 || |||| |||| | || || || || || || || || ||||| Sbjct 2272 ACCATTCGTTGCTCCAACTTGTGCACGGAAATCATCGAGTATTCCAGCAAGGACGAAGTC 2331 Query 364279 GCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAG-ATGGT-----ACT 364332 ||||| || || || || |||||||| | |||||| || | || ||| Sbjct 2332 GCCGTCTGCAATCTGGCATCGATCGCTGTCAACATGTTTGTGAACGCATCAGCCAAGACT 2391 Query 364333 TTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTT 364392 | ||| ||| | || | || || ||| | || || || | ||||| | Sbjct 2392 TACGACTTCCAAAAGCTCAAGGAAGTCACCAAGACTGTCACAAAGAACTTGAACAAGATC 2451 Query 364393 ATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCG 364452 ||||| || || || || || || || || |||| || || ||||||||||||||| Sbjct 2452 ATCGATGTCAACTACTACCCGATCCCAGAGGCTAAGCGATCGAACATGCGTCATCGCCCG 2511 Query 364453 ATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGAT 364512 || ||| | || | || ||||| || |||| ||| || | | | | | || || Sbjct 2512 ATCGGTATCGGCATTCAAGGCCTGGCCGACGCTTTCATCACGATGAGTTATCCGTTCGAG 2571 Query 364513 TCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATG 364572 ||||| |||| | || || || ||||||| || || || || | | ||| | Sbjct 2572 TCGCCAAACGCACAGAAGCTGAACCAGCAGATCTTCGAGACGATCTACTACGGCGCGCTT 2631 Query 364573 ACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCT 364632 || ||||| | || | | || | ||| || || || || || || Sbjct 2632 GAGGCAAGTTGTGAACTCGCCAGAGAGCTCGGTACTTACGAAACCTACGAAGGATCGCCG 2691 Query 364633 CTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAAC 364692 | ||| | |||| || |||| || | ||| | || ||| | | ||| || Sbjct 2692 GTGTCGAAAGGAATCTTGCAGTACGACATGTGGGAAAAGACACCAACCAACTTGTGGGAC 2751 Query 364693 TGGGATACGCTACGTTCCAACGTTAAGA------AGCATGGTACTCGCAACTCCCTCGTT 364746 |||| | || || | ||||| |||| || ||||| || || | Sbjct 2752 TGGGCTGTCCTG------AAGGCTAAGATCGCCGAGCACGGAGTGCGCAATTCACTTCTC 2805 Query 364747 ACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAA 364806 || || ||||| || ||||| ||||||||||| ||||| |||||||| ||||||| Sbjct 2806 CTCGCTCCAATGCCGACTGCTTCGACTGCACAGATTCTCGGCAACAACGAAAGCTTCGAG 2865 Query 364807 CCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAAT 364866 |||| || ||||| | || ||||| || ||||||||||| | | || ||| Sbjct 2866 CCGTACACCAGCAACGTCTACAACCGCCGCACGCTGAGCGGAGAATTTCAGATCGTCAAT 2925 Query 364867 AAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTAT 364926 | | || |||||||||| |||| || | || |||| ||| |||||||||| | Sbjct 2926 CACCATCTCATCAAGGATCTCACCGAACGAGATCTCTGGGACGACGACATGAAGAACGAG 2985 Query 364927 ATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGA-TTTCCAGAAGATCTGAAGCC 364985 |||||||| || || || || ||||||| || || | | || | || | || Sbjct 2986 ATCATCGCTAGCAACGGATCAGTTCAGAACA-TCGAGAAGATCCCCGCCGA-CATCCGCG 3043 Query 364986 TATT-TACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATC 365044 || ||||| ||||| ||||| || || | || | || | ||||| ||||||| Sbjct 3044 AGTTGTACAAGACCGTCTGGGAGATGTCAGTCAAGACGCAGATCCAGATGGCAGCCGATC 3103 Query 365045 GCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCG 365104 ||||||| || ||| |||| ||||| || ||||| | | | |||||| || || Sbjct 3104 GCGGTGCGTTCATCGATCAGTCGCAGTCATTCAACGTGCACGTCGCCGAGCCAAACTACG 3163 Query 365105 CCAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139 || || || || || || ||| |||| |||||| Sbjct 3164 GAAAACTGACGTCAATTCACTTCCACGGCTGGAAA 3198 >seq154 Length=135386 Score = 109 bits (120), Expect = 1e-18 Identities = 186/268 (69%), Gaps = 4/268 (1%) Strand=Plus/Minus Query 111627 CGTCGCATTATTATGAGTGCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCA 111686 |||||||||||| |||| || ||||||||| | | ||||||| | || || Sbjct 90765 CGTCGCATTATTTTGAGCGCTTGGAACCCAGCTCAGGTTCCCCAAATGGCTTTGCCGCCT 90706 Query 111687 TGTCATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCA--TGCCAAATGTATC 111744 ||||| | || ||||| || || ||||| || ||| |||||| | || | Sbjct 90705 TGTCACTGTCTGGCTCAGTTCTACGTCGCAGACGG--TGAACTCAGCTGCCAATTATACC 90648 Query 111745 AGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTA 111804 | ||||| || || || || ||||| ||||| || || ||||| |||||| || || | Sbjct 90647 AACGATCAGCCGACATGGGCCTTGGAGTTCCCTTCAACATTGCGTCTTACGCTCTTCTCA 90588 Query 111805 CTTGCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAG 111864 | | | || |||||| | || || | ||||||||||| ||||| |||| | |||||| Sbjct 90587 CGAACATGATTGCTCATGTCACGAACTTGAAACCGGGTGATTTCATCCACGCTCTCGGAG 90528 Query 111865 ATGCGCATGTTTACACAAACCACATTGA 111892 | |||| || ||| ||| ||||| || Sbjct 90527 ACACGCACGTCTACTTAAATCACATCGA 90500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303270154007654