Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1280 187 2e-42 seq108 143 3e-29 seq29 136 4e-27 seq1975 93.3 4e-14 seq773 84.2 2e-11 >seq1280 Length=9399 Score = 187 bits (206), Expect = 2e-42 Identities = 1168/1838 (64%), Gaps = 55/1838 (3%) Strand=Plus/Minus Query 144736 GGCCGCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTA 144795 ||| |||||||||||||||||||||||||| || || || | ||| ||| || Sbjct 3246 GGCAGCTGGCTTGGTGCGCAAATAGTACATTCCGGTCTTCAAGCCCATTTTCCAGCCGTG 3187 Query 144796 GTCGTGTATCGACGTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTG 144855 | ||| || ||||||| |||| | ||||| || || || || | || || Sbjct 3186 GAAGTGAATTGACGTCAGTTTTCCGTAGTTTGGCTCGGCGACGTGCACGTTGAATGACTG 3127 Query 144856 GCTTTGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGT-TTGCATTTCA 144914 ||||| ||||| || ||| ||||| ||||||| ||| | ||| ||| | || Sbjct 3126 CGACTGATCGATGAACGCACCGCGATCGGCTGCCATCTGGATC-TGCGTCTTGACTGACA 3068 Query 144915 TTTCCCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAA 144974 | ||||| ||||||||||||| |||| | | || || || || ||||| Sbjct 3067 TCTCCCAGACGGTCTTGTACAACTCGCGGATGTCGGCGGGGATCTTCTCGATGTTCTGAA 3008 Query 144975 TCGACCCCTTGTGCGCAAATATGGCGTTCCGCATTTCGGACGTGT-ACAGTTTTAACTTG 145033 || || ||| || | || ||||| ||| ||| ||| | || | | | | Sbjct 3007 CTGATCCGTTGCTAGCGATGATCTCGTTCTTCATGTCGT-CGTCCCAGAGATCTCGTTCG 2949 Query 145034 ATCAAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGC 145093 | | || | || | | |||||||||| |||||| || ||| || | || || Sbjct 2948 GTGAGATCCTTGATGAGATGGTGATTGACGATCTGAAATTCTCCGCTCAGCGTGCGGCGG 2889 Query 145094 AAATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTC 145153 || ||||| ||| | || || || ||||| ||||| || || || || ||| Sbjct 2888 TTGTAGACGTTGCTGGTGTACGGCTCGAAGCTTTCGTTGTTGCCGAGAATCTGTGCAGTC 2829 Query 145154 GTTGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCT 145213 | || || ||||| || | | | ||||||||||| ||||||| ||| | Sbjct 2828 GAAGCAGTCGGCATTGGAGCGAGGAGAAGTGAATTGCGCACTCCGTGCTCGGCGATCTTA 2769 Query 145214 TCCTTTAGCGTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGC 145273 |||| || | |||| ||||| | || || || |||||||||||||||||| Sbjct 2768 GCCTTCAGGACAGCCCAGTCCCACAAGTTGGTTGGTGTCTTTTCCCACATGTCGTACTGC 2709 Query 145274 AAAATGCCCT-CGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGC 145332 || || || | || ||| | | |||| ||| |||| | || | |||| Sbjct 2708 AAGATTCCTTTCGACACCGGCGAT-CCTTCGTAGGTTTCGTAAGTACCGAGCTCTCTGGC 2650 Query 145333 GAGCTCGCAACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAG 145392 ||| || ||||| ||||| || |||||| | || || |||||| || ||| ||| || Sbjct 2649 GAGTTCACAACTTGCCTCAAGCGCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTTCAG 2590 Query 145393 CAGCATCGCTTCATCGCT-CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCC 145451 | | || | | || |||| |||| | || | | ||||| ||||| || | Sbjct 2589 CTTCTGTGCGTT-TGGCGACTCGAACGGATAACTCATCGTGATGAAAGCGTCGGCCAGGC 2531 Query 145452 CCTGTATTCCCACGCCGATGGGCCGATGTTTCATGTT-GCTCATCCTCGCCGACTCGATA 145510 | || || || | ||||| || ||||| |||||| | || | | ||| ||| Sbjct 2530 CTTGAATGCCGATACCGATCGGGCGATGACGCATGTTCGATCG-CTTAGCCTCTGGGATC 2472 Query 145511 GGATA-TCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTG 145569 || || | | | || ||||| || || |||||||| || ||| || | | Sbjct 2471 GGGTAGTAGTTGACA-TCGATGATCTTGTTCAAGTTCTTTGTGACAGTCTTGGTGACTTC 2413 Query 145570 CCGCAACTTTTCAAAGTC--AAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCG 145627 | | ||||| ||||| || | | || | || |||| | | ||||| ||| Sbjct 2412 CTTGAGCTTTTGGAAGTCGTAAGTCTTGGCTGATG--CGTTCACAAACATGTTGACAGCG 2355 Query 145628 ATCGACGCCAAATTACAAACTGCCGTCTCCTCGGCGTCGCTG---TATTGTACGATCTCG 145684 ||||| |||| ||| || || || | || ||| | | |||| || | | ||| || Sbjct 2354 ATCGATGCCAGATTGCAGACGGC-GACT--TCGTCCTTGCTGGAATACTCGATGATTTCC 2298 Query 145685 GCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATT--ACTTTTCCTGTTGC 145742 | |||||| ||| || ||||| || | || ||||| || ||||| | ||||| Sbjct 2297 GTGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTT--CGGTTGC 2240 Query 145743 ACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAA 145800 | ||||||||||| | |||||| || ||||||||| || || | ||| | ||| || Sbjct 2239 AAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAA 2180 Query 145801 ACGGTGCAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCT 145860 || |||||| || || | ||| | |||| ||||| || |||||||| || Sbjct 2179 AC--CACAAGTCTTGAGCCTTGATCTGGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTC 2122 Query 145861 GTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACA 145920 ||| | || ||| ||| | || | | ||| | ||||| ||||| ||| ||||| Sbjct 2121 GTACAACTTCTCGAACTCTTCGCCCCACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACA 2062 Query 145921 CATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAG 145980 ||||| |||||| || |||||| | ||||| ||| |||||||| || | ||||| Sbjct 2061 CATCAACGACCAGACTCCGTTGCTTTCAACGCGACGCATGAACAAATCGGGAATCCACAA 2002 Query 145981 CGCGTACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAG 146040 ||||| | || ||| || || || || || ||||| ||| | || || Sbjct 2001 AGCGTAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAG 1942 Query 146041 CACACT-ATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTT 146099 | ||| ||| ||| |||||||||| || | ||| | |||| || ||| ||| | Sbjct 1941 GA-ACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCT 1883 Query 146100 TG---CCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGA 146156 || || || ||||| || | || | ||||||| | || |||| ||| || | | Sbjct 1882 TGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAACAA 1823 Query 146157 CGCCGCTGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAA 146216 ||| | | | ||||| || | || || || || ||| | || || | Sbjct 1822 GTCCGTTTGAGATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGCGAATACAGTGCA 1763 Query 146217 CATTCACGCCGAGACCGCC-GCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCG 146275 | || || |||| |||||| |||| ||||| || ||||| | ||||| ||| Sbjct 1762 CGTTGACACCGATACCGCCAGCCG-ACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCG 1704 Query 146276 TAGATGCCGTCAAT---GCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCT 146330 || ||||||||||| | |||| | |||| | | ||||| ||||| | | || Sbjct 1703 TAAATGCCGTCAATTGAGTCATCGGACATCGA----CAACAAGAAA-CACGACGAAAGCT 1649 Query 146331 GCGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGG 146389 ||| ||||| | || | ||| | || || || || || || | ||| | Sbjct 1648 GCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAAGTAGCGTTCAG 1589 Query 146390 CTCATCATCCGATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCG 146449 || | || || || || || | ||||| || ||||| ||||||| || Sbjct 1588 -ACAAAAGGTTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACCATGGATGCCCACGGCA 1530 Query 146450 ACGCGCATGAGCATGTGTTGGGGCCGCTCCGCCA-CTTG--ATTGTCAATCTTTAACAAA 146506 || | ||||||||||||||| || ||||| || | |||| |||| |||| | ||| Sbjct 1529 ACTCTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTTGT---TCTTCAGCAAG 1473 Query 146507 TAGCCGTTCTCCAGGGTTTTGTATCCGAAAAATTTGTA 146544 |||| | ||||| || ||| ||||||| | ||||| Sbjct 1472 TAGCTGCGCTCCAAAGTCTTGAATCCGAAGTAATTGTA 1435 >seq108 Length=162490 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||||||||||| ||||||||||| |||||| Sbjct 111837 CCACCACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTC 111896 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || ||||||||||| ||| |||| | ||||||||| || ||||| Sbjct 111897 AATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 111956 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || || | | ||||| Sbjct 111957 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACC 112016 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| || ||||| ||||| || ||||| Sbjct 112017 TCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063 >seq29 Length=258594 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || || || | |||||||||||||| |||||||| |||||| Sbjct 96649 CCACCACGCAGACGGAGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTC 96590 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || | ||||| || ||| |||| || ||||||||||| || || Sbjct 96589 AGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 96530 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| ||| || ||||| | || | ||| || | | ||| | Sbjct 96529 ATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACC 96470 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||||| ||||||||| || | ||||| ||||| || |||||| Sbjct 96469 TCGAGGGTAATGGTTTTACCCGTCAATGTTTTGACGAAGATTTGCATG 96422 >seq1975 Length=2172 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || || || | ||||| || || || |||||||| |||||| Sbjct 1987 CCTCCACGGAGACGAAGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGCTC 2046 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || || |||| || ||||||||||| || ||| Sbjct 2047 AAGGTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGG 2106 Query 131128 ATTCCTTCTTTGTC 131141 |||||||| || || Sbjct 2107 ATTCCTTCCTTATC 2120 >seq773 Length=33153 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || || || | ||||| || ||||| |||||||| ||||| Sbjct 117 CCTCCACGGAGACGAAGAACCAAGTGCAATGTCGATTCTTTTTGGATGTTGTAGTCGCTT 58 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGG 131123 | |||||| ||| || |||||||| || ||| |||| || ||||||||||| || Sbjct 57 AAGGTGCGACCGTCTTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGGTCTGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471983316900480