Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 215 7e-51
seq596 183 4e-41
>seq1280
Length=9399
Score = 215 bits (238), Expect = 7e-51
Identities = 843/1304 (65%), Gaps = 40/1304 (3%)
Strand=Plus/Minus
Query 62422 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG-CTAGTTCACAACTCGCCTCTA 62480
||||||| | || || ||||| | || || ||| | | ||||||||||| ||||| |
Sbjct 2688 CGATCCTTCGTAGGTTTCGTAAGTACCGAGCT-CTCTGGCGAGTTCACAACTTGCCTCAA 2630
Query 62481 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGAT-CT-TGCGCTTCCAGGCT 62538
|| ||||| || || || |||||||||| || || || | || |||| || |||
Sbjct 2629 GCGCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTT---GGCG 2573
Query 62539 A-TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGA 62597
| || || |||||| | | || || ||||| || | ||||||| || |||||||
Sbjct 2572 ACTCGAACGGATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGA 2513
Query 62598 TAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTA 62657
| || | ||| | | | || || | ||| ||||| || || || || || | ||| |
Sbjct 2512 TCGGGCGATGACGCATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGA 2453
Query 62658 TAATTTTATTGAGATT---TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT 62714
| || || || | || | ||||| | ||| || ||||| || || | || |
Sbjct 2452 TGATCTTGTTCAAGTTCTTTGTGACAGTC---TTGGTGACTTCCTTGAGCTTTTGGAAGT 2396
Query 62715 C--AAATC---GCCCATCTATT-ACAAACATGTTCAATGCAACAGATGCCAGATTACAAA 62768
| || || || || || ||||||||||| | || | ||||||||||| || |
Sbjct 2395 CGTAAGTCTTGGCTGATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGA 2336
Query 62769 CGGCTACCTCATTAGCATCC--GCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 62826
|||| || || | | | | | ||| | || || || ||||| | || ||
Sbjct 2335 CGGCGACTTCGTC--CTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACG 2278
Query 62827 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 62886
||||| || | || || || || |||| ||| || || ||||| || | ||| |
Sbjct 2277 AATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTA 2218
Query 62887 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTAT 62946
|| || ||||| || | || || || || || || ||| | | || ||||||| ||
Sbjct 2217 AGGCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGAT 2158
Query 62947 TATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCC 63006
||| | ||| ||||||| ||||| |||||||| || ||
Sbjct 2157 CTGGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCC 2098
Query 63007 CCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATC 63066
||| | || || || ||||| | |||||||||||||||||| |||||| |
Sbjct 2097 CCACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTTG-C 2039
Query 63067 CTTCA-CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 63125
|||| | || ||| || | ||| |||||||| | ||| || | || | | |
Sbjct 2038 TTTCAACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCAC 1979
Query 63126 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63185
| ||| || || || || || || || |||||||||||| | | | || ||||
Sbjct 1978 GAACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCC 1919
Query 63186 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 63245
|||| || | || || || | | | || || || |||||||| || || |||| || |
Sbjct 1918 ACGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGC 1859
Query 63246 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCC 63305
||||||||| || ||||| | ||||||||||| || || || || | || ||||| |
Sbjct 1858 GAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGC 1799
Query 63306 CTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGC 63363
| | |||||| |||| |||| ||||| | | | ||| | ||| || || || ||
Sbjct 1798 CGGCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTG--ACACCGATACCGCCAGC 1741
Query 63364 CATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 63423
| || ||| || |||||| |||| | |||||| || ||||| || || |||||
Sbjct 1740 CGACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATC 1681
Query 63424 CATCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 63482
||| | || || ||||| || | || | ||| || | || || |
Sbjct 1680 GGACATCGACAACAAG-AAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGA 1622
Query 63483 AGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63542
|| || || || || || || | |||||| | || ||||| |||||||| || |
Sbjct 1621 GAGTTGGCGAGGCATGGGTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCG 1562
Query 63543 AGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 63598
|||| || || |||| |||| || || || || | ||| | |||||| || ||
Sbjct 1561 AGTCGATGTCTTCACCATGGATG----CCCACGGCAACTCTCATGAGCATGTGTTGCGGG 1506
Query 63599 CTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 63658
| || |||||||| || | |||| ||||||| |||||||| || || ||
Sbjct 1505 CGCTCGGCGATCTTGCCTTTGTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCG 1446
Query 63659 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702
|| || ||||| ||||| || ||||| || || | |||||
Sbjct 1445 AAGTAATTGTAGCCGAAGTCGCGGTCGTAGATGATGGCAGAGTT 1402
>seq596
Length=46163
Score = 183 bits (202), Expect = 4e-41
Identities = 546/834 (65%), Gaps = 19/834 (2%)
Strand=Plus/Plus
Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429
||||||||||| ||||| || ||||| ||||| || || || || | || || |
Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547
Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489
|||||||| ||| ||||| | ||| || || ||| || ||| | || || |
Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607
Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA-G 32548
| | ||| || || || || || ||| ||| | | | || ||||| || | | |
Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667
Query 32549 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608
| || ||||| || | || ||||| ||||||||||| || || |||| || ||
Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726
Query 32609 AGATCTTACTGTTTCTTCACTCGGTGGATACAAT---AAATGTTTAAACATCAAACATGC 32665
| || ||| | | ||||| | | | | |||| | ||||||| || ||
Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783
Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725
|| || ||||| | |||||||| | || | |||||| || || ||||| || ||
Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843
Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785
||| | || ||||| || ||||| || || || ||||| ||| |||||||||||
Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903
Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCA----TAACCG--GCGCTGTCATGTAT 32839
||| || || |||||||| |||| | |||||| || || | |||| | ||
Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCG---AT 2960
Query 32840 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 32899
||| | ||||| || ||||| || |||||||| || | |||| | || || ||
Sbjct 2961 CCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAA 3020
Query 32900 GAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTC 32959
|| ||| || || ||| ||| || || ||||| | ||| ||||| ||
Sbjct 3021 AAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTC 3080
Query 32960 CGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTG 33019
|| || | ||||| ||||| || || || || |||||||| | ||||| || | ||
Sbjct 3081 GGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTG 3140
Query 33020 TACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 33079
||||| | || ||||| | | || || || || || ||||| ||||| ||
Sbjct 3141 CACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAA 3200
Query 33080 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGTTTATTCCAATCAT 33138
|| |||| ||||| ||||||| ||| || || | || ||||| || |
Sbjct 3201 GAAGGCCAGAACATGGGAGATAAAATGACGCTCGG-TGTCCTTCAAGTTGTTCCAGTCGT 3259
Query 33139 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192
| || || || || | ||| ||||||||||||||||||||||| || || ||||
Sbjct 3260 TCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGCCT 3313
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633592421761200
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