Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1280 215 7e-51 seq596 183 4e-41 >seq1280 Length=9399 Score = 215 bits (238), Expect = 7e-51 Identities = 843/1304 (65%), Gaps = 40/1304 (3%) Strand=Plus/Minus Query 62422 CGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAG-CTAGTTCACAACTCGCCTCTA 62480 ||||||| | || || ||||| | || || ||| | | ||||||||||| ||||| | Sbjct 2688 CGATCCTTCGTAGGTTTCGTAAGTACCGAGCT-CTCTGGCGAGTTCACAACTTGCCTCAA 2630 Query 62481 ATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGAT-CT-TGCGCTTCCAGGCT 62538 || ||||| || || || |||||||||| || || || | || |||| || ||| Sbjct 2629 GCGCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTT---GGCG 2573 Query 62539 A-TCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGA 62597 | || || |||||| | | || || ||||| || | ||||||| || ||||||| Sbjct 2572 ACTCGAACGGATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGA 2513 Query 62598 TAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTA 62657 | || | ||| | | | || || | ||| ||||| || || || || || | ||| | Sbjct 2512 TCGGGCGATGACGCATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGA 2453 Query 62658 TAATTTTATTGAGATT---TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT 62714 | || || || | || | ||||| | ||| || ||||| || || | || | Sbjct 2452 TGATCTTGTTCAAGTTCTTTGTGACAGTC---TTGGTGACTTCCTTGAGCTTTTGGAAGT 2396 Query 62715 C--AAATC---GCCCATCTATT-ACAAACATGTTCAATGCAACAGATGCCAGATTACAAA 62768 | || || || || || ||||||||||| | || | ||||||||||| || | Sbjct 2395 CGTAAGTCTTGGCTGATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGA 2336 Query 62769 CGGCTACCTCATTAGCATCC--GCATATTGTATTATCTCAGTGCAAAGATTACTACACTT 62826 |||| || || | | | | | ||| | || || || ||||| | || || Sbjct 2335 CGGCGACTTCGTC--CTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACG 2278 Query 62827 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAA 62886 ||||| || | || || || || |||| ||| || || ||||| || | ||| | Sbjct 2277 AATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTA 2218 Query 62887 TGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTAT 62946 || || ||||| || | || || || || || || ||| | | || ||||||| || Sbjct 2217 AGGCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGAT 2158 Query 62947 TATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCC 63006 ||| | ||| ||||||| ||||| |||||||| || || Sbjct 2157 CTGGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCC 2098 Query 63007 CCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATC 63066 ||| | || || || ||||| | |||||||||||||||||| |||||| | Sbjct 2097 CCACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTTG-C 2039 Query 63067 CTTCA-CTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 63125 |||| | || ||| || | ||| |||||||| | ||| || | || | | | Sbjct 2038 TTTCAACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCAC 1979 Query 63126 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 63185 | ||| || || || || || || || |||||||||||| | | | || |||| Sbjct 1978 GAACTTCTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCC 1919 Query 63186 ACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 63245 |||| || | || || || | | | || || || |||||||| || || |||| || | Sbjct 1918 ACGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGC 1859 Query 63246 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCC 63305 ||||||||| || ||||| | ||||||||||| || || || || | || ||||| | Sbjct 1858 GAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGC 1799 Query 63306 CTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGC 63363 | | |||||| |||| |||| ||||| | | | ||| | ||| || || || || Sbjct 1798 CGGCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTG--ACACCGATACCGCCAGC 1741 Query 63364 CATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATC 63423 | || ||| || |||||| |||| | |||||| || ||||| || || ||||| Sbjct 1740 CGACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATC 1681 Query 63424 CATCAT-GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 63482 ||| | || || ||||| || | || | ||| || | || || | Sbjct 1680 GGACATCGACAACAAG-AAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGA 1622 Query 63483 AGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTG 63542 || || || || || || || | |||||| | || ||||| |||||||| || | Sbjct 1621 GAGTTGGCGAGGCATGGGTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCG 1562 Query 63543 AGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGT 63598 |||| || || |||| |||| || || || || | ||| | |||||| || || Sbjct 1561 AGTCGATGTCTTCACCATGGATG----CCCACGGCAACTCTCATGAGCATGTGTTGCGGG 1506 Query 63599 CTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCA 63658 | || |||||||| || | |||| ||||||| |||||||| || || || Sbjct 1505 CGCTCGGCGATCTTGCCTTTGTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCG 1446 Query 63659 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702 || || ||||| ||||| || ||||| || || | ||||| Sbjct 1445 AAGTAATTGTAGCCGAAGTCGCGGTCGTAGATGATGGCAGAGTT 1402 >seq596 Length=46163 Score = 183 bits (202), Expect = 4e-41 Identities = 546/834 (65%), Gaps = 19/834 (2%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 ||||||||||| ||||| || ||||| ||||| || || || || | || || | Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 |||||||| ||| ||||| | ||| || || ||| || ||| | || || | Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA-G 32548 | | ||| || || || || || ||| ||| | | | || ||||| || | | | Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667 Query 32549 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608 | || ||||| || | || ||||| ||||||||||| || || |||| || || Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726 Query 32609 AGATCTTACTGTTTCTTCACTCGGTGGATACAAT---AAATGTTTAAACATCAAACATGC 32665 | || ||| | | ||||| | | | | |||| | ||||||| || || Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783 Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725 || || ||||| | |||||||| | || | |||||| || || ||||| || || Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843 Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785 ||| | || ||||| || ||||| || || || ||||| ||| ||||||||||| Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCA----TAACCG--GCGCTGTCATGTAT 32839 ||| || || |||||||| |||| | |||||| || || | |||| | || Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCG---AT 2960 Query 32840 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 32899 ||| | ||||| || ||||| || |||||||| || | |||| | || || || Sbjct 2961 CCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAA 3020 Query 32900 GAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTC 32959 || ||| || || ||| ||| || || ||||| | ||| ||||| || Sbjct 3021 AAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTC 3080 Query 32960 CGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTG 33019 || || | ||||| ||||| || || || || |||||||| | ||||| || | || Sbjct 3081 GGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTG 3140 Query 33020 TACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 33079 ||||| | || ||||| | | || || || || || ||||| ||||| || Sbjct 3141 CACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAA 3200 Query 33080 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGTTTATTCCAATCAT 33138 || |||| ||||| ||||||| ||| || || | || ||||| || | Sbjct 3201 GAAGGCCAGAACATGGGAGATAAAATGACGCTCGG-TGTCCTTCAAGTTGTTCCAGTCGT 3259 Query 33139 TGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 | || || || || | ||| ||||||||||||||||||||||| || || |||| Sbjct 3260 TCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGCCT 3313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633592421761200