Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq29 131 1e-25 seq496 125 6e-24 seq1975 91.5 1e-13 >seq29 Length=258594 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || || || ||||| |||||| |||| || |||| || ||| | || Sbjct 96423 ATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGAGCCATCG 96482 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| ||||||||||| ||||| || ||||| Sbjct 96483 GACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCAG 96542 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||| || ||||| ||||||| || ||| || |||| ||||| Sbjct 96543 CAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGCGACTACAAC 96602 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||| || || || || || || || || Sbjct 96603 ATCCAAAAGGAGTCGACACTTCACTTGGTCCT 96634 >seq496 Length=57215 Score = 125 bits (138), Expect = 6e-24 Identities = 206/297 (69%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 50985 GTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTTGCG 51044 ||| ||||| || || ||||| ||||||||||||||||||| |||| || | | || Sbjct 40861 GTTGAACTTGCGTTTGCAGCCTTCGTAGTTCATATACCTGATCTTGCCGAATACATCTCG 40802 Query 51045 TTCTTTGAACGGCCTGTCGTGCACACCGCAAATTGACCACATACAACCCACATAATTGTT 51104 |||||| | | ||||||| | || | ||| |||||| || || || || ||| Sbjct 40801 TTCTTTCCAGCCCATGTCGTGAATTCCTCCAATGCTCCACATGCATCCGACGTATCCGTT 40742 Query 51105 AGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCCAT 51164 ||||| || || |||| | |||| ||||||| || | || ||| | | || Sbjct 40741 TGGATCACGTCCGTCCAAGTTGTAGCGATCGTTGAGGTAGATAGCAGTGGCAAGAGCTTC 40682 Query 51165 GTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCGTG 51224 |||| | | | |||| || | || ||||||||||||||||| || | | ||||||| Sbjct 40681 ATCTGGCGTTGACATCCACTCGAGGATCTTCTTGGCCCAGTACATTCGAAGGAAACCGTG 40622 Query 51225 CATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGT 51281 ||| ||||| || || | ||| |||||| | |||||||| ||||| || || Sbjct 40621 CATTTTGCCTTCTTTGCGCAACTGGTTTTGAGCGGCATTCCACAAGTCGTCATGCGT 40565 >seq1975 Length=2172 Score = 91.5 bits (100), Expect = 1e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 25044 GAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGG 25103 ||||| ||| | || ||| | || ||| | ||| ||| ||| || || ||||| Sbjct 2168 GAAGTCGAGCCATCAGACTCCATTGAGAACGTTAAGGCAAAGATCCAGGATAAGGAAGGA 2109 Query 25104 ATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACT 25163 || || || ||||| ||||| | || ||||| || || || | ||||||| |||||| Sbjct 2108 ATCCCCCCAGACCAGCAGCGATTGATCTTTGCTGGAAAGCAGCTCGAAGATGGTCGCACC 2049 Query 25164 GTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGA 25223 || |||| ||||| || || |||||||| || || || || || || | || | ||| Sbjct 2048 TTGAGCGACTACAACATCCAGAAAGAATCGACACTGCACTTGGTTCTTCGTCTCCGTGGA 1989 Query 25224 GGAAATTA 25231 |||||||| Sbjct 1988 GGAAATTA 1981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433301609918555