Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq29 131 1e-25
seq496 125 6e-24
seq1975 91.5 1e-13
>seq29
Length=258594
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || ||||| |||||| |||| || |||| || ||| | ||
Sbjct 96423 ATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGAGCCATCG 96482
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| | ||| || ||| ||||||||||| ||||| || |||||
Sbjct 96483 GACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCAG 96542
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || ||||| || ||||| ||||||| || ||| || |||| |||||
Sbjct 96543 CAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGCGACTACAAC 96602
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || || || || || || ||
Sbjct 96603 ATCCAAAAGGAGTCGACACTTCACTTGGTCCT 96634
>seq496
Length=57215
Score = 125 bits (138), Expect = 6e-24
Identities = 206/297 (69%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 50985 GTTAAACTTACGCTTACAGCCCGCGTAGTTCATATACCTGATTCTGCCAAAAATTTTGCG 51044
||| ||||| || || ||||| ||||||||||||||||||| |||| || | | ||
Sbjct 40861 GTTGAACTTGCGTTTGCAGCCTTCGTAGTTCATATACCTGATCTTGCCGAATACATCTCG 40802
Query 51045 TTCTTTGAACGGCCTGTCGTGCACACCGCAAATTGACCACATACAACCCACATAATTGTT 51104
|||||| | | ||||||| | || | ||| |||||| || || || || |||
Sbjct 40801 TTCTTTCCAGCCCATGTCGTGAATTCCTCCAATGCTCCACATGCATCCGACGTATCCGTT 40742
Query 51105 AGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGCATAACCCAATGCCAT 51164
||||| || || |||| | |||| ||||||| || | || ||| | | ||
Sbjct 40741 TGGATCACGTCCGTCCAAGTTGTAGCGATCGTTGAGGTAGATAGCAGTGGCAAGAGCTTC 40682
Query 51165 GTCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACATGCGCATGTAACCGTG 51224
|||| | | | |||| || | || ||||||||||||||||| || | | |||||||
Sbjct 40681 ATCTGGCGTTGACATCCACTCGAGGATCTTCTTGGCCCAGTACATTCGAAGGAAACCGTG 40622
Query 51225 CATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACAATTCGTCGTGAGT 51281
||| ||||| || || | ||| |||||| | |||||||| ||||| || ||
Sbjct 40621 CATTTTGCCTTCTTTGCGCAACTGGTTTTGAGCGGCATTCCACAAGTCGTCATGCGT 40565
>seq1975
Length=2172
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 25044 GAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGG 25103
||||| ||| | || ||| | || ||| | ||| ||| ||| || || |||||
Sbjct 2168 GAAGTCGAGCCATCAGACTCCATTGAGAACGTTAAGGCAAAGATCCAGGATAAGGAAGGA 2109
Query 25104 ATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACT 25163
|| || || ||||| ||||| | || ||||| || || || | ||||||| ||||||
Sbjct 2108 ATCCCCCCAGACCAGCAGCGATTGATCTTTGCTGGAAAGCAGCTCGAAGATGGTCGCACC 2049
Query 25164 GTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGA 25223
|| |||| ||||| || || |||||||| || || || || || || | || | |||
Sbjct 2048 TTGAGCGACTACAACATCCAGAAAGAATCGACACTGCACTTGGTTCTTCGTCTCCGTGGA 1989
Query 25224 GGAAATTA 25231
||||||||
Sbjct 1988 GGAAATTA 1981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433301609918555
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |