Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq596 315 8e-81 >seq596 Length=46163 Score = 315 bits (348), Expect = 8e-81 Identities = 605/886 (68%), Gaps = 7/886 (1%) Strand=Plus/Plus Query 92742 TTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACA 92801 ||||||||| || || | || || || ||||| |||| || ||| ||||| | Sbjct 2430 TTAGAAATCAGCGTCCAAAGTGAACACGTTGTC--GTGGCGGTTTGC-CATCACACCGGA 2486 Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861 ||||||||||| || ||||| || || |||||||| |||||||| || | || ||||| Sbjct 2487 CTTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGA 2546 Query 92862 ATTCACTA--GTGATTGGATTCTTGGCGTTATAATACTTTTCACCGATCAACTCGTACAA 92919 | || | | || ||||| |||| || || |||| || | | |||| ||| Sbjct 2547 TTCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAG 2606 Query 92920 TAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAA- 92978 | | ||| || || || || ||||| | |||||| | | || ||||| || || | Sbjct 2607 AAGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCAT 2666 Query 92979 GACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGA 93038 | || || || || |||||||||| || |||| || || || || ||| | || Sbjct 2667 GTCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGA 2725 Query 93039 TTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAA 93098 | || || || | |||||||| || ||| | | || || |||| | ||| |||| Sbjct 2726 TCTCGATAACGCGTTCCTTTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGCAA 2785 Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTA 93158 |||| || || || ||||| ||||| || | || || ||| || | |||||| | Sbjct 2786 AGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGGCA 2845 Query 93159 ACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTT 93218 || || || ||||||||||| || ||||| ||||| || || || || || |||| Sbjct 2846 TCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCCTT 2905 Query 93219 CCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATT 93278 | || || ||||| || | ||| ||||| |||| || || | ||| |||||| | Sbjct 2906 CGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCAGT 2965 Query 93279 TTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGT 93338 || ||||| || || |||||||| | ||| ||||| | |||| ||||| || ||| Sbjct 2966 CCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAGGA 3025 Query 93339 AATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAAT 93398 | || ||||| | || |||| ||||| || || || | || || ||||| || || | Sbjct 3026 AGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGAGT 3085 Query 93399 GGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTT 93458 ||||||| ||||| || || ||||| || ||||| || | || || |||| ||||||| Sbjct 3086 GGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCACTT 3145 Query 93459 CTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaG 93518 | || || | || ||||| || || || || || || ||||| ||||| || || | Sbjct 3146 CCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAGAAGG 3205 Query 93519 CCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGAT 93578 ||| | ||| |||||||| ||| || || | || | ||| ||| | | Sbjct 3206 CCAGAACATGGGAGATAAAATGACGCTCGGTGTCCTTCAAGTTGTTCCAGTCGTTCATGT 3265 Query 93579 CTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 | ||||| | |||||||||||| || |||||||| || ||||| || Sbjct 3266 CCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGC 3311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556826017082280