Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1280 183 3e-41 seq108 93.3 4e-14 >seq1280 Length=9399 Score = 183 bits (202), Expect = 3e-41 Identities = 950/1500 (63%), Gaps = 53/1500 (4%) Strand=Plus/Minus Query 128778 CTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCC 128837 |||||| || || || | ||| |||| || || ||||||||||||||||||||||| || Sbjct 3273 CTTGTCGACTGTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCC 3214 Query 128838 TGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGG 128897 || ||||| || ||||||| ||| | |||||| | |||| | ||||| | || Sbjct 3213 GGTCTTCAAGCCCATTTTCCAGCCGTGGAAGTGAATTGACGTCAGTTTTCCGTAGTTTGG 3154 Query 128898 TTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957 | | | || ||||| || ||||| || || | ||||||||||| || Sbjct 3153 CTCGGCGACGTGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGC 3094 Query 128958 CATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTG 129017 ||| ||| | || ||| ||| ||||| || || ||||| | ||| | | || Sbjct 3093 CATCTGGATCTGCGTCTTGACTGACATCTCCCAGACGGTCTTGTACAACTCGCGGATGTC 3034 Query 129018 TTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCAT 129077 || || | || |||||||| || |||||| | || || || | ||| ||| Sbjct 3033 GGCGGGGATCTTCTCGATGTTCTGAACTGATCCGTTGCTAGCGATGATCTCGTTCTTCAT 2974 Query 129078 CTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTACTTG 129137 | |||| | | || ||| | | | ||| | | | | | | || | | || Sbjct 2973 GTCGTCGTCCCAGAGATCTCGTTCGGTGAGATCCTTGATGAGATGGTGATTGACGATCTG 2914 Query 129138 AAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGATTC 129197 ||| || || || ||| || ||| | |||| ||||| ||||||| || ||| Sbjct 2913 AAATTCTCCGCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGCTTTC 2854 Query 129198 ATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCGAGTT 129257 |||||||| | || || || || | || || ||||| ||| | | ||| || || Sbjct 2853 GTTGTTGCCGAGAATCTGTGCAGTCGAAGCAGTCGGCATTGGAGCGAGGAGAAGTGAATT 2794 Query 129258 TCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGATGTGGG 129317 |||| ||||||| || | || | | ||||||||||| || || Sbjct 2793 GCGCACTCCGTGCTCGGCGATCTTAGCCTTCAGGACAGCCCAGTCCCACAAGTTGGTTGG 2734 Query 129318 TGTGTGATTCCACAAGTCGTATTGCAATATACCC----AAACTGGCGGGACTGGAAAAGT 129373 ||| | | ||||| |||||| ||||| || || | || |||| || || Sbjct 2733 TGTCTTTTCCCACATGTCGTACTGCAAGATTCCTTTCGACACCGGCGATCCTTC----GT 2678 Query 129374 AGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAAAT 129433 ||| |||| ||| || | || | ||| ||||| || || | ||||| | | Sbjct 2677 AGGTTTCGTAAGTACCGAGCTCTCTGGCGAGTTCACAACTTGCCTCAAGCGCGCCGTAGT 2618 Query 129434 AAATTGTTTCGGCAATTTTGGTGTTCAACA-CTTTGGCCTGGTCGCTTTCGTACGGCATA 129492 | || || ||| || | ||||| | || || | | || | || |||| | Sbjct 2617 AGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTTGGCGACT-CGAACGGATAA 2559 Query 129493 CGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTT 129552 | || | || || | |||||||| |||||||| || | |||||| || ||||| Sbjct 2558 CTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGATGACGC 2499 Query 129553 CTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAAA 129612 | || ||| | ||| | || |||||||||| || || || ||||| || Sbjct 2498 ATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATGATCTTGTTCAAG 2439 Query 129613 TTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTA---CTCGCCTACA 129669 ||||| ||| | || || || | || | | ||| || | ||| || | || Sbjct 2438 TTCTTTGTGACAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAAGTCTTGGCT--- 2382 Query 129670 TCGATG--TCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGT 129727 |||| | ||||| |||||| ||||| |||| |||||||||||| ||||| Sbjct 2381 --GATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACGGCGACTTCGT 2324 Query 129728 TTTTGTCACTG---TACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCA 129784 ||| ||| ||||||| ||||| | |||||| || ||||||||| | Sbjct 2323 CCTTG---CTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGA 2267 Query 129785 AATGCTTTTGATT--ACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCC 129842 | || || || ||||| ||||||||| || ||||||| |||||| |||||||| Sbjct 2266 CGTTCTGCTGGTTCGACTTTCG--GTTGCAAGCGTCCTTGTACAACATGTAAGGCGTGCC 2209 Query 129843 CGTTTCGACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTAC 129902 || |||||||| | |||| |||| |||||||| ||||||||||||| | | Sbjct 2208 AGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGATCTGGCGGAG 2149 Query 129903 AAATTTGCCACATTTC----TCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTA 129958 | ||| ||| |||||| | | |||| | || || ||| ||| | Sbjct 2148 GTAACGGCC----TTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCC--CCA 2095 Query 129959 CG-GT-GTCGAGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTC 130016 || || || ||| || | ||||||||||||| ||| | ||| | ||| Sbjct 2094 CGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTTGCTTTC 2035 Query 130017 GACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCG----CGCTT 130072 || || ||| ||||||||||| | ||||| ||||| |||| || || || Sbjct 2034 AACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGAAC 1975 Query 130073 TTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCC 130132 |||| || | | || |||| || || || ||||| ||| | | |||| |||||| Sbjct 1974 TTCT-TCTTTG---CCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCC 1919 Query 130133 ACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGTGGC 130189 |||| || | ||||||||| | || || || ||| || |||||||| || | || Sbjct 1918 ACGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGC 1859 Query 130190 GCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGC 130249 | ||| |||||||| || |||||||||| | | |||||| | | ||||| |||| Sbjct 1858 GAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGC 1799 >seq108 Length=162490 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 ||||||||||| || || ||||| | ||||| || || |||| || || || || | Sbjct 112066 AAGATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCA 112007 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | || || | || || |||| || || ||||||||||| || ||||| || ||| Sbjct 112006 TCGGACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGAT 111947 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || || ||||| || || || ||||| ||| | || || ||||| | ||| ||| Sbjct 111946 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGCGACTAC 111887 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||||| || || || || | || || ||| | || | || || ||| Sbjct 111886 AACATTCAGAAGGAGTCGACACTTCACTTGGTTCTCCGTCTTCGTGGTGGT 111836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419702438171305