Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 183 3e-41
seq108 93.3 4e-14
>seq1280
Length=9399
Score = 183 bits (202), Expect = 3e-41
Identities = 950/1500 (63%), Gaps = 53/1500 (4%)
Strand=Plus/Minus
Query 128778 CTTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCC 128837
|||||| || || || | ||| |||| || || ||||||||||||||||||||||| ||
Sbjct 3273 CTTGTCGACTGTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCC 3214
Query 128838 TGTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGG 128897
|| ||||| || ||||||| ||| | |||||| | |||| | ||||| | ||
Sbjct 3213 GGTCTTCAAGCCCATTTTCCAGCCGTGGAAGTGAATTGACGTCAGTTTTCCGTAGTTTGG 3154
Query 128898 TTGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGC 128957
| | | || ||||| || ||||| || || | ||||||||||| ||
Sbjct 3153 CTCGGCGACGTGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGC 3094
Query 128958 CATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTG 129017
||| ||| | || ||| ||| ||||| || || ||||| | ||| | | ||
Sbjct 3093 CATCTGGATCTGCGTCTTGACTGACATCTCCCAGACGGTCTTGTACAACTCGCGGATGTC 3034
Query 129018 TTTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCAT 129077
|| || | || |||||||| || |||||| | || || || | ||| |||
Sbjct 3033 GGCGGGGATCTTCTCGATGTTCTGAACTGATCCGTTGCTAGCGATGATCTCGTTCTTCAT 2974
Query 129078 CTGTTCGTTGTACAAATTCAGTTTGATCAAATCGTCGGTCAAGTATTTGTTTATTACTTG 129137
| |||| | | || ||| | | | ||| | | | | | | || | | ||
Sbjct 2973 GTCGTCGTCCCAGAGATCTCGTTCGGTGAGATCCTTGATGAGATGGTGATTGACGATCTG 2914
Query 129138 AAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGATTC 129197
||| || || || ||| || ||| | |||| ||||| ||||||| || |||
Sbjct 2913 AAATTCTCCGCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGCTTTC 2854
Query 129198 ATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCGAGTT 129257
|||||||| | || || || || | || || ||||| ||| | | ||| || ||
Sbjct 2853 GTTGTTGCCGAGAATCTGTGCAGTCGAAGCAGTCGGCATTGGAGCGAGGAGAAGTGAATT 2794
Query 129258 TCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACATCGATGTGGG 129317
|||| ||||||| || | || | | ||||||||||| || ||
Sbjct 2793 GCGCACTCCGTGCTCGGCGATCTTAGCCTTCAGGACAGCCCAGTCCCACAAGTTGGTTGG 2734
Query 129318 TGTGTGATTCCACAAGTCGTATTGCAATATACCC----AAACTGGCGGGACTGGAAAAGT 129373
||| | | ||||| |||||| ||||| || || | || |||| || ||
Sbjct 2733 TGTCTTTTCCCACATGTCGTACTGCAAGATTCCTTTCGACACCGGCGATCCTTC----GT 2678
Query 129374 AGGAATCGTGCACGCCGTAAGCTTTTGCCAATTCGCAACTCGCTTCCAATGCGCCAAAAT 129433
||| |||| ||| || | || | ||| ||||| || || | ||||| | |
Sbjct 2677 AGGTTTCGTAAGTACCGAGCTCTCTGGCGAGTTCACAACTTGCCTCAAGCGCGCCGTAGT 2618
Query 129434 AAATTGTTTCGGCAATTTTGGTGTTCAACA-CTTTGGCCTGGTCGCTTTCGTACGGCATA 129492
| || || ||| || | ||||| | || || | | || | || |||| |
Sbjct 2617 AGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTTGGCGACT-CGAACGGATAA 2559
Query 129493 CGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTT 129552
| || | || || | |||||||| |||||||| || | |||||| || |||||
Sbjct 2558 CTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGATGACGC 2499
Query 129553 CTATTGGATTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAAA 129612
| || ||| | ||| | || |||||||||| || || || ||||| ||
Sbjct 2498 ATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATGATCTTGTTCAAG 2439
Query 129613 TTCTTGACCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTA---CTCGCCTACA 129669
||||| ||| | || || || | || | | ||| || | ||| || | ||
Sbjct 2438 TTCTTTGTGACAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAAGTCTTGGCT--- 2382
Query 129670 TCGATG--TCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGT 129727
|||| | ||||| |||||| ||||| |||| |||||||||||| |||||
Sbjct 2381 --GATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACGGCGACTTCGT 2324
Query 129728 TTTTGTCACTG---TACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGCCCA 129784
||| ||| ||||||| ||||| | |||||| || ||||||||| |
Sbjct 2323 CCTTG---CTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGA 2267
Query 129785 AATGCTTTTGATT--ACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGCC 129842
| || || || ||||| ||||||||| || ||||||| |||||| ||||||||
Sbjct 2266 CGTTCTGCTGGTTCGACTTTCG--GTTGCAAGCGTCCTTGTACAACATGTAAGGCGTGCC 2209
Query 129843 CGTTTCGACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTAC 129902
|| |||||||| | |||| |||| |||||||| ||||||||||||| | |
Sbjct 2208 AGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGATCTGGCGGAG 2149
Query 129903 AAATTTGCCACATTTC----TCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTA 129958
| ||| ||| |||||| | | |||| | || || ||| ||| |
Sbjct 2148 GTAACGGCC----TTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCC--CCA 2095
Query 129959 CG-GT-GTCGAGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTC 130016
|| || || ||| || | ||||||||||||| ||| | ||| | |||
Sbjct 2094 CGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTTGCTTTC 2035
Query 130017 GACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCG----CGCTT 130072
|| || ||| ||||||||||| | ||||| ||||| |||| || || ||
Sbjct 2034 AACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGAAC 1975
Query 130073 TTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCC 130132
|||| || | | || |||| || || || ||||| ||| | | |||| ||||||
Sbjct 1974 TTCT-TCTTTG---CCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCC 1919
Query 130133 ACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGTGGC 130189
|||| || | ||||||||| | || || || ||| || |||||||| || | ||
Sbjct 1918 ACGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGC 1859
Query 130190 GCACGGCATTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGC 130249
| ||| |||||||| || |||||||||| | | |||||| | | ||||| ||||
Sbjct 1858 GAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGC 1799
>seq108
Length=162490
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
||||||||||| || || ||||| | ||||| || || |||| || || || || |
Sbjct 112066 AAGATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCA 112007
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| || || | || || |||| || || ||||||||||| || ||||| || |||
Sbjct 112006 TCGGACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGAT 111947
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || ||||| || || || ||||| ||| | || || ||||| | ||| |||
Sbjct 111946 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGCGACTAC 111887
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| || || || || | || || ||| | || | || || |||
Sbjct 111886 AACATTCAGAAGGAGTCGACACTTCACTTGGTTCTCCGTCTTCGTGGTGGT 111836
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419702438171305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |