Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1159 96.9 7e-15 seq753 96.9 7e-15 seq480 95.1 2e-14 >seq1159 Length=12845 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||||| Sbjct 10427 AGCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 10368 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 10367 CCCCACGTTGGGC 10355 >seq753 Length=34488 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||||| Sbjct 30663 AGCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 30604 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 30603 CCCCACGTTGGGC 30591 >seq480 Length=58954 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||| ||||| | ||||||||||||| | |||||||||||||||| Sbjct 44426 GCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 44485 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 44486 CCCACGTTGGGC 44497 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||||| ||||| | ||||||||||||| | ||||||||||||| Sbjct 45368 ATGGCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCG 45309 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 45308 AGCCCCACGTTGGGC 45294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027770993712477