Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2433 172 1e-37 seq29 158 2e-33 seq108 149 1e-30 seq1975 131 3e-25 seq1159 89.7 9e-13 seq753 89.7 9e-13 seq480 89.7 9e-13 seq1542 87.8 3e-12 >seq2433 Length=1189 Score = 172 bits (190), Expect = 1e-37 Identities = 396/592 (67%), Gaps = 16/592 (3%) Strand=Plus/Minus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGCTCAG-GAGACTGGAGCATTTTCCACATTGCTTC 268269 ||||| || || || ||||| ||||| | | ||| ||| | ||| ||||||| || || Sbjct 603 CCAGTGGCGATGACGAAGTCTTCTGGTTTATCGAG-CTGCAACATCATCCACATCGCCTC 545 Query 268270 GACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCA 268329 ||| ||||| | ||| || |||||||| || || | ||| ||||| || | ||| Sbjct 544 GACGTAGTCTCTCGCGTGCCCCCAATCACGTTTAGAGTCGATGTTGCCCAACTCCAGTAC 485 Query 268330 TTTCTGCTTGC-----CGAGCTTCACGCGTGCAAGACCG--CGAGTGATTTTTCGGGTCA 268382 || ||| |||| |||| || |||| || | | |||||||| | || | Sbjct 484 TTCCTG-TTGCTTCAGCGAGATTTTCGCG------ACTGTTCTGGTGATTTTCCTAGTAA 432 Query 268383 CGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACA 268442 | || ||||||||||| || |||||||||||| || || || ||||||||| ||| Sbjct 431 CAAAATTCTCGCCACGTCTCGGTGACTCGTGGTTGAACAGAATTCCATTGCACGCGTACA 372 Query 268443 TGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGT 268502 || | || || || | |||||| | ||| ||||||| | | | ||||| || | Sbjct 371 TGTCGTACGCTTCCCTGTAGTTGATGACGATCCAGTAACCGTAGAGTTTTGCGCAAGCAT 312 Query 268503 ACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAA 268562 ||||||| ||||||| ||| || || | |||||||| | || ||| || || Sbjct 311 ACGGAGACCGTGGATAGAAAGGAGTTTTCTCGTTTTGAGGTGTCTCAGCGACCTTTCCGT 252 Query 268563 AGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGA 268622 | ||||| |||||||| |||||||||||||| || || || || || ||| || Sbjct 251 ACAGCTCTGAGGTCGACGCTTGGTAGAACTTGACCTGCTTCTCCAGCCCACAAGTTCTGA 192 Query 268623 TTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCT 268682 | || || | | | | |||||| | ||||| || || || || || |||| | | Sbjct 191 TCGCATCTAAAAGTCTCAAAGTTCCAACTCCATCGACTTCAGCGGTGTATTCCGAAAGGT 132 Query 268683 CGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCT 268742 ||||||| | | ||| || |||||| | || || || || ||| ||| ||| Sbjct 131 CGAATGAGATTTTGACGTGAGACTGGGCAGCGAGATTGTAGACTTCAGTCGGCCGCACCA 72 Query 268743 GCTGCACGATCTTCACGAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTGCAA 268794 | | |||||| || ||| | ||| || | ||||||||| ||||| Sbjct 71 GAGCGATGATCTTGACTAGGCAACTGCTGTCTGTCATGTCTCCGTAATGCAA 20 >seq29 Length=258594 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || || ||||| ||||||||||| || ||| Sbjct 96649 CCACCACGCAGACGGAGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTC 96590 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| || ||||| |||||||| || | || || ||||| || ||| Sbjct 96589 AGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 96530 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| ||||| || ||||| |||||||| ||||| ||||| | || || || Sbjct 96529 ATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACC 96470 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| |||||||| ||||| | || |||||||| || ||||| Sbjct 96469 TCGAGGGTAATGGTTTTACCCGTCAATGTTTTGACGAAGATTTGCAT 96423 >seq108 Length=162490 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | |||||||| || || ||||| || || ||||| || ||| Sbjct 111837 CCACCACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTC 111896 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | || ||||| | |||||| || ||||| || || | || || || || ||| Sbjct 111897 AATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 111956 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||||||||| ||||| |||||||| || || ||||| | || || || Sbjct 111957 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACC 112016 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || |||||||| || ||||| || ||||| Sbjct 112017 TCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063 >seq1975 Length=2172 Score = 131 bits (144), Expect = 3e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 |||||||||||| || || || | |||||||| || || || ||||| |||||||| || Sbjct 1980 TTAATTTCCTCCACGGAGACGAAGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTA 2039 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 ||| | || | |||||||| | |||||| || || || || | || || ||||| Sbjct 2040 GTCGCTCAAGGTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTC 2099 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || || || |||||||| || || ||||||||||| ||| ||| |||| ||||| || Sbjct 2100 TGGGGGGATTCCTTCCTTATCCTGGATCTTTGCCTTAACGTTCTCAATGGAGTCTGATGG 2159 Query 68408 TTCTACTTCCAA 68419 || |||||||| Sbjct 2160 CTCGACTTCCAA 2171 >seq1159 Length=12845 Score = 89.7 bits (98), Expect = 9e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||||||||| | || ||||||| || | |||||||||||||||| Sbjct 10426 GCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 10367 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 10366 CCCACGTTGGGC 10355 >seq753 Length=34488 Score = 89.7 bits (98), Expect = 9e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||||||||| | || ||||||| || | |||||||||||||||| Sbjct 30662 GCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 30603 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 30602 CCCACGTTGGGC 30591 >seq480 Length=58954 Score = 89.7 bits (98), Expect = 9e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||||||||| | || ||||||| || | |||||||||||||||| Sbjct 44426 GCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 44485 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 44486 CCCACGTTGGGC 44497 Score = 89.7 bits (98), Expect = 9e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 |||||| |||||||||||||||||| | || ||||||| || | |||||||||||||||| Sbjct 45365 GCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 45306 Query 84516 CCCACATCGGGC 84527 ||||| | |||| Sbjct 45305 CCCACGTTGGGC 45294 >seq1542 Length=4837 Score = 87.8 bits (96), Expect = 3e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399 || ||||| || || || ||||||||||| || |||||||||||||| || |||| | Sbjct 11 TGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGAG 70 Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459 || | | || || || | |||||||| ||||| || | ||||||||||| || ||| Sbjct 71 TCGGAGGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGACGAAGATTTGC 130 Query 68460 ATT 68462 ||| Sbjct 131 ATT 133 Score = 87.8 bits (96), Expect = 3e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 || ||||| ||||||||||| || ||||| ||||| ||| ||||||||||||| || Sbjct 4836 GGGGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTTTCGATGGTGTCTGATGGC 4777 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||| || || || | || ||||| || || ||||| Sbjct 4776 TCAACCTCGAGGGTGATGGTCTTGCCTGTCAATGTTTTGACAAAGATTTGCAT 4724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921564833160840