Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq2433 172 1e-37
seq29 158 2e-33
seq108 149 1e-30
seq1975 131 3e-25
seq1159 89.7 9e-13
seq753 89.7 9e-13
seq480 89.7 9e-13
seq1542 87.8 3e-12
>seq2433
Length=1189
Score = 172 bits (190), Expect = 1e-37
Identities = 396/592 (67%), Gaps = 16/592 (3%)
Strand=Plus/Minus
Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGCTCAG-GAGACTGGAGCATTTTCCACATTGCTTC 268269
||||| || || || ||||| ||||| | | ||| ||| | ||| ||||||| || ||
Sbjct 603 CCAGTGGCGATGACGAAGTCTTCTGGTTTATCGAG-CTGCAACATCATCCACATCGCCTC 545
Query 268270 GACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCA 268329
||| ||||| | ||| || |||||||| || || | ||| ||||| || | |||
Sbjct 544 GACGTAGTCTCTCGCGTGCCCCCAATCACGTTTAGAGTCGATGTTGCCCAACTCCAGTAC 485
Query 268330 TTTCTGCTTGC-----CGAGCTTCACGCGTGCAAGACCG--CGAGTGATTTTTCGGGTCA 268382
|| ||| |||| |||| || |||| || | | |||||||| | || |
Sbjct 484 TTCCTG-TTGCTTCAGCGAGATTTTCGCG------ACTGTTCTGGTGATTTTCCTAGTAA 432
Query 268383 CGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACA 268442
| || ||||||||||| || |||||||||||| || || || ||||||||| |||
Sbjct 431 CAAAATTCTCGCCACGTCTCGGTGACTCGTGGTTGAACAGAATTCCATTGCACGCGTACA 372
Query 268443 TGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGT 268502
|| | || || || | |||||| | ||| ||||||| | | | ||||| || |
Sbjct 371 TGTCGTACGCTTCCCTGTAGTTGATGACGATCCAGTAACCGTAGAGTTTTGCGCAAGCAT 312
Query 268503 ACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAA 268562
||||||| ||||||| ||| || || | |||||||| | || ||| || ||
Sbjct 311 ACGGAGACCGTGGATAGAAAGGAGTTTTCTCGTTTTGAGGTGTCTCAGCGACCTTTCCGT 252
Query 268563 AGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGA 268622
| ||||| |||||||| |||||||||||||| || || || || || ||| ||
Sbjct 251 ACAGCTCTGAGGTCGACGCTTGGTAGAACTTGACCTGCTTCTCCAGCCCACAAGTTCTGA 192
Query 268623 TTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCT 268682
| || || | | | | |||||| | ||||| || || || || || |||| | |
Sbjct 191 TCGCATCTAAAAGTCTCAAAGTTCCAACTCCATCGACTTCAGCGGTGTATTCCGAAAGGT 132
Query 268683 CGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCT 268742
||||||| | | ||| || |||||| | || || || || ||| ||| |||
Sbjct 131 CGAATGAGATTTTGACGTGAGACTGGGCAGCGAGATTGTAGACTTCAGTCGGCCGCACCA 72
Query 268743 GCTGCACGATCTTCACGAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTGCAA 268794
| | |||||| || ||| | ||| || | ||||||||| |||||
Sbjct 71 GAGCGATGATCTTGACTAGGCAACTGCTGTCTGTCATGTCTCCGTAATGCAA 20
>seq29
Length=258594
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || || ||||| ||||||||||| || |||
Sbjct 96649 CCACCACGCAGACGGAGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTC 96590
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| || ||||| |||||||| || | || || ||||| || |||
Sbjct 96589 AGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 96530
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||| ||||| || ||||| |||||||| ||||| ||||| | || || ||
Sbjct 96529 ATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACC 96470
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| |||||||| ||||| | || |||||||| || |||||
Sbjct 96469 TCGAGGGTAATGGTTTTACCCGTCAATGTTTTGACGAAGATTTGCAT 96423
>seq108
Length=162490
Score = 149 bits (164), Expect = 1e-30
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||||||| || || ||||| || || ||||| || |||
Sbjct 111837 CCACCACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTC 111896
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| ||| | || ||||| | |||||| || ||||| || || | || || || || |||
Sbjct 111897 AATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 111956
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||||||||| ||||| |||||||| || || ||||| | || || ||
Sbjct 111957 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACC 112016
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || |||||||| || ||||| || |||||
Sbjct 112017 TCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063
>seq1975
Length=2172
Score = 131 bits (144), Expect = 3e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287
|||||||||||| || || || | |||||||| || || || ||||| |||||||| ||
Sbjct 1980 TTAATTTCCTCCACGGAGACGAAGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTA 2039
Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347
||| | || | |||||||| | |||||| || || || || | || || |||||
Sbjct 2040 GTCGCTCAAGGTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTC 2099
Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407
|| || || |||||||| || || ||||||||||| ||| ||| |||| ||||| ||
Sbjct 2100 TGGGGGGATTCCTTCCTTATCCTGGATCTTTGCCTTAACGTTCTCAATGGAGTCTGATGG 2159
Query 68408 TTCTACTTCCAA 68419
|| ||||||||
Sbjct 2160 CTCGACTTCCAA 2171
>seq1159
Length=12845
Score = 89.7 bits (98), Expect = 9e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
|||||| |||||||||||||||||| | || ||||||| || | ||||||||||||||||
Sbjct 10426 GCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 10367
Query 84516 CCCACATCGGGC 84527
||||| | ||||
Sbjct 10366 CCCACGTTGGGC 10355
>seq753
Length=34488
Score = 89.7 bits (98), Expect = 9e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
|||||| |||||||||||||||||| | || ||||||| || | ||||||||||||||||
Sbjct 30662 GCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 30603
Query 84516 CCCACATCGGGC 84527
||||| | ||||
Sbjct 30602 CCCACGTTGGGC 30591
>seq480
Length=58954
Score = 89.7 bits (98), Expect = 9e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
|||||| |||||||||||||||||| | || ||||||| || | ||||||||||||||||
Sbjct 44426 GCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 44485
Query 84516 CCCACATCGGGC 84527
||||| | ||||
Sbjct 44486 CCCACGTTGGGC 44497
Score = 89.7 bits (98), Expect = 9e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
|||||| |||||||||||||||||| | || ||||||| || | ||||||||||||||||
Sbjct 45365 GCCCGGCTAGCTCAGTCGGCAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 45306
Query 84516 CCCACATCGGGC 84527
||||| | ||||
Sbjct 45305 CCCACGTTGGGC 45294
>seq1542
Length=4837
Score = 87.8 bits (96), Expect = 3e-12
Identities = 93/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 68340 TGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTG 68399
|| ||||| || || || ||||||||||| || |||||||||||||| || |||| |
Sbjct 11 TGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGAG 70
Query 68400 TCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGC 68459
|| | | || || || | |||||||| ||||| || | ||||||||||| || |||
Sbjct 71 TCGGAGGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGACGAAGATTTGC 130
Query 68460 ATT 68462
|||
Sbjct 131 ATT 133
Score = 87.8 bits (96), Expect = 3e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408
|| ||||| ||||||||||| || ||||| ||||| ||| ||||||||||||| ||
Sbjct 4836 GGGGGAATTCCTTCCTTGTCCTGGATCTTAGCCTTAACGTTTTCGATGGTGTCTGATGGC 4777
Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | ||||||||| || || || | || ||||| || || |||||
Sbjct 4776 TCAACCTCGAGGGTGATGGTCTTGCCTGTCAATGTTTTGACAAAGATTTGCAT 4724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921564833160840
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