Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq108 131 1e-25
seq29 111 1e-19
>seq108
Length=162490
Score = 131 bits (144), Expect = 1e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| || || | || || || || ||||||||||| |||
Sbjct 111834 ATACCACCACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCG 111893
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|||| || ||| |||||||| || || |||||| |||| |||||||| || || |||
Sbjct 111894 CTCAATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGA 111953
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||||| || | | ||||| ||||| | | |||
Sbjct 111954 GGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCG 112013
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | ||| | || |||||||| || ||||| || || || |||||
Sbjct 112014 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063
>seq29
Length=258594
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214
||| ||||| || | | || || || | || || || ||||| |||||||| |||||
Sbjct 96650 ACCACCACGCAGACGGAGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCT 96591
Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274
|| |||||| |||||| | ||| || || ||| |||| | ||||| ||||| || ||
Sbjct 96590 CAGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGG 96531
Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334
||||||||||||||| ||||| || | | ||| | ||||| | | || ||
Sbjct 96530 AATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAAC 96471
Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 114385
|| | ||| | ||||| || |||| ||||| || || || ||||||||
Sbjct 96470 CTCGAGGGTAATGGTTTTACCCGTCAATGTTTTGACGAAGATTTGCATGGC 96420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420108813421164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |