Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq108 102 2e-16 seq596 100 7e-16 seq1542 93.3 1e-13 seq1975 86.0 1e-11 >seq108 Length=162490 Score = 102 bits (112), Expect = 2e-16 Identities = 153/214 (71%), Gaps = 14/214 (7%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || |||||| | ||||| |||||||| | || || || |||||| Sbjct 111873 TCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAG 111932 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 ||||||||||| || |||| || || ||||| || || ||||| || || || || Sbjct 111933 ATCAGACGCTGCTG---ATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACA 111989 Query 288400 TTTTCTATAGAATCGCTCGAT---TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456 ||||| || | || |||| || || ||||| ||||| ||||| ||||| || || Sbjct 111990 TTTTCAATTGTGTC---CGATGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTT 112046 Query 288457 TTGACGAATATCTGCATTATGTTATTCTAATATT 288490 || ||||| || ||||| || || |||| ||| Sbjct 112047 TTCACGAAGATTTGCATCTTG--ATCCTAAAATT 112078 >seq596 Length=46163 Score = 100 bits (110), Expect = 7e-16 Identities = 122/161 (76%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 269149 ATGATCGGTATGAA-TGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTAT 269207 ||| |||| ||||| ||| || || ||| | |||| ||||| |||||||| |||||| | Sbjct 2666 ATGCTCGGCATGAACTGCGGA-CTAATGTCTGAATACATCGAGTTCGTGGCCGATCGTCT 2608 Query 269208 CTTCACGGCACTCGGTTATGAGAAAG-TGTACAATTCGAAGAATCCCTTCGCCTTTATGG 269266 | | | || || || ||||| | |||||| | || ||||||||| |||| |||| Sbjct 2607 TCTGTCCGAGCTTGGAGTTG-GAAAGATCTACAATACCAAAAATCCCTTCTCCTTCATGG 2549 Query 269267 AACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAG 269307 || || |||||||| ||||||||||| |||||||| ||| Sbjct 2548 AATCGATCTCGCTCGAGGGAAAGACGAATTTCTTCGAGAAG 2508 >seq1542 Length=4837 Score = 93.3 bits (102), Expect = 1e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||||||||| || |||||||| || || || || ||||| || || ||| | || Sbjct 23 GGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGAGTCGGAGGGCTCA 82 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || ||||| ||||| ||||| ||||||| ||||||||||| || |||||| Sbjct 83 ACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGACGAAGATTTGCATT 133 >seq1975 Length=2172 Score = 86.0 bits (94), Expect = 1e-11 Identities = 124/174 (71%), Gaps = 6/174 (3%) Strand=Plus/Plus Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302 || ||| || ||||| | ||| || | || | || |||||| ||||| || ||||| Sbjct 1983 ATTTCCTCCACGGAGACGAAGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTC 2042 Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362 | | ||||| || ||||| | || ||||| || ||||||| ||||| || || Sbjct 2043 GCTCAAGGTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGG---TC 2099 Query 288363 TGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC 288413 |||| |||||||| ||||||||||| || || || ||||| || || || || Sbjct 2100 TGGGGGGATTCCTTCCTTATCCTGGATCTTTGCCTTAACGTTCTCAATGGAGTC 2153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179578873732966