Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq108 102 2e-16
seq596 100 7e-16
seq1542 93.3 1e-13
seq1975 86.0 1e-11
>seq108
Length=162490
Score = 102 bits (112), Expect = 2e-16
Identities = 153/214 (71%), Gaps = 14/214 (7%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || || || |||||| | ||||| |||||||| | || || || ||||||
Sbjct 111873 TCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAG 111932
Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
||||||||||| || |||| || || ||||| || || ||||| || || || ||
Sbjct 111933 ATCAGACGCTGCTG---ATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACA 111989
Query 288400 TTTTCTATAGAATCGCTCGAT---TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTC 288456
||||| || | || |||| || || ||||| ||||| ||||| ||||| || ||
Sbjct 111990 TTTTCAATTGTGTC---CGATGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTT 112046
Query 288457 TTGACGAATATCTGCATTATGTTATTCTAATATT 288490
|| ||||| || ||||| || || |||| |||
Sbjct 112047 TTCACGAAGATTTGCATCTTG--ATCCTAAAATT 112078
>seq596
Length=46163
Score = 100 bits (110), Expect = 7e-16
Identities = 122/161 (76%), Gaps = 4/161 (2%)
Strand=Plus/Minus
Query 269149 ATGATCGGTATGAA-TGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTAT 269207
||| |||| ||||| ||| || || ||| | |||| ||||| |||||||| |||||| |
Sbjct 2666 ATGCTCGGCATGAACTGCGGA-CTAATGTCTGAATACATCGAGTTCGTGGCCGATCGTCT 2608
Query 269208 CTTCACGGCACTCGGTTATGAGAAAG-TGTACAATTCGAAGAATCCCTTCGCCTTTATGG 269266
| | | || || || ||||| | |||||| | || ||||||||| |||| ||||
Sbjct 2607 TCTGTCCGAGCTTGGAGTTG-GAAAGATCTACAATACCAAAAATCCCTTCTCCTTCATGG 2549
Query 269267 AACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAG 269307
|| || |||||||| ||||||||||| |||||||| |||
Sbjct 2548 AATCGATCTCGCTCGAGGGAAAGACGAATTTCTTCGAGAAG 2508
>seq1542
Length=4837
Score = 93.3 bits (102), Expect = 1e-13
Identities = 87/111 (78%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||||||||| || |||||||| || || || || ||||| || || ||| | ||
Sbjct 23 GGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGAGTCGGAGGGCTCA 82
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| ||||| ||||| ||||| ||||||| ||||||||||| || ||||||
Sbjct 83 ACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGACGAAGATTTGCATT 133
>seq1975
Length=2172
Score = 86.0 bits (94), Expect = 1e-11
Identities = 124/174 (71%), Gaps = 6/174 (3%)
Strand=Plus/Plus
Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302
|| ||| || ||||| | ||| || | || | || |||||| ||||| || |||||
Sbjct 1983 ATTTCCTCCACGGAGACGAAGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTC 2042
Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362
| | ||||| || ||||| | || ||||| || ||||||| ||||| || ||
Sbjct 2043 GCTCAAGGTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGG---TC 2099
Query 288363 TGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC 288413
|||| |||||||| ||||||||||| || || || ||||| || || || ||
Sbjct 2100 TGGGGGGATTCCTTCCTTATCCTGGATCTTTGCCTTAACGTTCTCAATGGAGTC 2153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179578873732966
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |