Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq222 102 9e-17
seq162 96.9 4e-15
seq108 91.5 2e-13
seq29 82.4 8e-11
>seq222
Length=107969
Score = 102 bits (112), Expect = 9e-17
Identities = 74/86 (86%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 56993 TTATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 57052
|| || |||| |||||| |||| | |||||||||| ||||| || |||||||||||||
Sbjct 9613 TTCTGCAAAAAATTCTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGA 9672
Query 57053 CATACTCACCACTATACTACCGAGGA 57078
|||||||||||||||||||||||||
Sbjct 9673 GATACTCACCACTATACTACCGAGGA 9698
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| | |||| |||| | |||||||||| ||||| || ||||||||||||| ||||
Sbjct 10106 AAAAAAATCCTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATAC 10047
Query 57058 TCACCACTATACTACCGAGGA 57078
|||||||||||||||||||||
Sbjct 10046 TCACCACTATACTACCGAGGA 10026
>seq162
Length=132079
Score = 96.9 bits (106), Expect = 4e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| |||| | |||||||||| ||||| || ||||||||||||| ||||||||||||
Sbjct 3181 TCTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATACTCACCACT 3240
Query 57066 ATACTACCGAGGA 57078
|||||||||||||
Sbjct 3241 ATACTACCGAGGA 3253
Score = 96.9 bits (106), Expect = 4e-15
Identities = 70/81 (86%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| | |||| |||| | |||||||||| ||||| || ||||||||||||| ||||
Sbjct 4250 AAAAAAATCCTCCCCGGCCGGGAATCGAACCCGGGTCTTCCACGTGACAGGCGGAGATAC 4191
Query 57058 TCACCACTATACTACCGAGGA 57078
|||||||||||||||||||||
Sbjct 4190 TCACCACTATACTACCGAGGA 4170
>seq108
Length=162490
Score = 91.5 bits (100), Expect = 2e-13
Identities = 150/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| |||||| ||||| ||||| || || || || |||| ||
Sbjct 111855 ACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCA 111914
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| |||||||| || || |||||||| || | || | || |||||||| |
Sbjct 111915 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGG 111974
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCGACCGTGATGGTT 42176
|| || |||| | | | ||||| |||| || || |||| ||||||||
Sbjct 111975 ATCTTGGCCTTGACATTTTCAATTGTGTC---CGATGGCTCGACCTCGAGGGTGATGGTC 112031
Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
||||| || || || || || ||||||||||| ||
Sbjct 112032 TTGCCGGTGAGGGTTTTCACGAAGATTTGCATCTT 112066
>seq29
Length=258594
Score = 82.4 bits (90), Expect = 8e-11
Identities = 146/212 (69%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| ||||||||| || ||||| || |||||| || | || ||
Sbjct 96631 ACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCTTCC 96572
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
| ||||| || ||||| || | |||||||||||| | || | || || |||||| |
Sbjct 96571 AATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGG 96512
Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGAT---TCCACATCGACCGTGATGGTT 42176
|| || |||| | | | ||||| |||| || || |||| || ||||||
Sbjct 96511 ATCTTGGCCTTGACATTTTCGATAGTGTC---CGATGGCTCAACCTCGAGGGTAATGGTT 96455
Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| ||||| | || || || |||||||||||
Sbjct 96454 TTACCCGTCAATGTTTTGACGAAGATTTGCAT 96423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543178869570480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |