Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 145 8e-30
seq108 120 3e-22
seq1975 86.0 6e-12
seq29 82.4 8e-11
>seq1280
Length=9399
Score = 145 bits (160), Expect = 8e-30
Identities = 342/510 (67%), Gaps = 11/510 (2%)
Strand=Plus/Minus
Query 154635 ATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATG 154694
||||| | |||||| || ||| ||||||||||| | ||| | ||| ||||| || |
Sbjct 2303 ATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTTCGG 2244
Query 154695 TTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATT 154754
||||| ||||| |||||||| ||||| || ||||| || || ||||| | || || ||
Sbjct 2243 TTGCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATG 2184
Query 154755 GTGCGAAACAGACTTC--GCGCCTCAACTTGAC--AAGTAAATCGATTTTCGCTCTCATA 154810
| | || || | || | |||| | || | | |||| || |||| || ||
Sbjct 2183 G--CAAACCACAAGTCTTGAGCCTTGATCTGGCGGAGGTAA--CGGCCTTCGGCTTCGTA 2128
Query 154811 TTGTTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTC 154870
| ||||||| || || |||||| | || ||| | | || ||||||| ||
Sbjct 2127 TCTCTCGTACAACTTCTCGAACTCTTCGCCCCACGAGTCGTAGAGGCCTGGACAGCTGTG 2068
Query 154871 GGGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCAC 154930
||||||||||| ||||| | | |||| || ||||| ||| |||||||| || |
Sbjct 2067 CGGACACATCAACGACCAGACTCCGTTGCTTTCAACGCGACGCATGAACAAATCGGGAAT 2008
Query 154931 CCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAA 154990
|||||||||||| |||| ||||| || ||||| ||| ||||| ||| |
Sbjct 2007 CCACAAAGCGTAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTGAG 1948
Query 154991 ATTCAAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCT-- 155048
|| | || || | | |||| ||||||||||||| | ||| | || | || |||
Sbjct 1947 ATCGAGGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACCTGG 1888
Query 155049 TTGCGT-TTTCCTCCTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGG 155107
| || | ||||| ||||| || || | || | || ||||| || ||||||| |||
Sbjct 1887 TCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGG 1828
Query 155108 TTCCACGCCGCTGGCCGTGCCGTTGGTGCC 155137
| | ||| | | | |||||||||||
Sbjct 1827 AACAAGTCCGTTTGAGATCCCGTTGGTGCC 1798
>seq108
Length=162490
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| ||||| || || ||||||||||| || | ||||| ||||||||||||||
Sbjct 111861 TGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCAAGCTGC 111920
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
||||| || | || || |||||||| || |||||||| ||||| || ||||| || ||
Sbjct 111921 TTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTG 111980
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| || | ||| || | || || || | || | ||||||||||||
Sbjct 111981 GCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTG 112040
Query 64421 AAAGTTTTTACGAAAATTTGCATTTTAAT 64449
| ||||| ||||| |||||||| || ||
Sbjct 112041 AGGGTTTTCACGAAGATTTGCATCTTGAT 112069
>seq1975
Length=2172
Score = 86.0 bits (94), Expect = 6e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
||||||||||| || |||||||| || | |||||| | ||||| |||||||| ||
Sbjct 2017 GTCGATTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCGAGCTGCTTTCCA 2076
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | ||||||||||| || || |||||||| || || || || ||| |||
Sbjct 2077 GCAAAGATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTATCCTGGATCTTTGCCTTA 2136
Query 64367 AC 64368
||
Sbjct 2137 AC 2138
>seq29
Length=258594
Score = 82.4 bits (90), Expect = 8e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| ||||| || ||||| |||||||| || | || || | ||||| | |||
Sbjct 96625 TGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCTTCCAATTGC 96566
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| ||||| | || | ||||||||||| || ||||| |||||||| || || || ||
Sbjct 96565 TTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTTG 96506
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| || | || || | || || || | || | ||| || || |||
Sbjct 96505 GCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTTTTACCCGTC 96446
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
|| ||||| ||||| ||||||||
Sbjct 96445 AATGTTTTGACGAAGATTTGCAT 96423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499613590936680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |