Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1280 145 8e-30 seq108 120 3e-22 seq1975 86.0 6e-12 seq29 82.4 8e-11 >seq1280 Length=9399 Score = 145 bits (160), Expect = 8e-30 Identities = 342/510 (67%), Gaps = 11/510 (2%) Strand=Plus/Minus Query 154635 ATTTCTGCGCACAAATTACTGCATCGAATGGTGCCCAGGTTTTTCTGATTCGATTTGATG 154694 ||||| | |||||| || ||| ||||||||||| | ||| | ||| ||||| || | Sbjct 2303 ATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTTCGG 2244 Query 154695 TTGCATGCGTCTTTGTACAAAATGTACGGGGTGCCCGTTTCCACTTGGGTTTCAATAATT 154754 ||||| ||||| |||||||| ||||| || ||||| || || ||||| | || || || Sbjct 2243 TTGCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATG 2184 Query 154755 GTGCGAAACAGACTTC--GCGCCTCAACTTGAC--AAGTAAATCGATTTTCGCTCTCATA 154810 | | || || | || | |||| | || | | |||| || |||| || || Sbjct 2183 G--CAAACCACAAGTCTTGAGCCTTGATCTGGCGGAGGTAA--CGGCCTTCGGCTTCGTA 2128 Query 154811 TTGTTCGTACAGTTTTTCAAACTCTAAACTGTACACGTCCGACAAACCGGGACAGCGGTC 154870 | ||||||| || || |||||| | || ||| | | || ||||||| || Sbjct 2127 TCTCTCGTACAACTTCTCGAACTCTTCGCCCCACGAGTCGTAGAGGCCTGGACAGCTGTG 2068 Query 154871 GGGACACATCAATGACCACATTTCGTTTTGTTGTACGCGTTTCATAAACAAATCCGGCAC 154930 ||||||||||| ||||| | | |||| || ||||| ||| |||||||| || | Sbjct 2067 CGGACACATCAACGACCAGACTCCGTTGCTTTCAACGCGACGCATGAACAAATCGGGAAT 2008 Query 154931 CCACAAAGCGTACAACAAATCACGCGCCTTTTTGTCTTCAGCGCCCATGTTTCGCTTTAA 154990 |||||||||||| |||| ||||| || ||||| ||| ||||| ||| | Sbjct 2007 CCACAAAGCGTAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTGAG 1948 Query 154991 ATTCAAAAAATCATATATGTCGGCGTGCCACGGCTCTAAATATACGGCCATCGCGCCT-- 155048 || | || || | | |||| ||||||||||||| | ||| | || | || ||| Sbjct 1947 ATCGAGGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACCTGG 1888 Query 155049 TTGCGT-TTTCCTCCTTGATCCACGTGACGCACACAATTATTGTACACGCGCAACAATGG 155107 | || | ||||| ||||| || || | || | || ||||| || ||||||| ||| Sbjct 1887 TCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGG 1828 Query 155108 TTCCACGCCGCTGGCCGTGCCGTTGGTGCC 155137 | | ||| | | | ||||||||||| Sbjct 1827 AACAAGTCCGTTTGAGATCCCGTTGGTGCC 1798 >seq108 Length=162490 Score = 120 bits (132), Expect = 3e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| || || ||||||||||| || | ||||| |||||||||||||| Sbjct 111861 TGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCAAGCTGC 111920 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||| || | || || |||||||| || |||||||| ||||| || ||||| || || Sbjct 111921 TTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTG 111980 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| ||| || | ||| || | || || || | || | |||||||||||| Sbjct 111981 GCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTG 112040 Query 64421 AAAGTTTTTACGAAAATTTGCATTTTAAT 64449 | ||||| ||||| |||||||| || || Sbjct 112041 AGGGTTTTCACGAAGATTTGCATCTTGAT 112069 >seq1975 Length=2172 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||||||||| || |||||||| || | |||||| | ||||| |||||||| || Sbjct 2017 GTCGATTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCGAGCTGCTTTCCA 2076 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || | ||||||||||| || || |||||||| || || || || ||| ||| Sbjct 2077 GCAAAGATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTATCCTGGATCTTTGCCTTA 2136 Query 64367 AC 64368 || Sbjct 2137 AC 2138 >seq29 Length=258594 Score = 82.4 bits (90), Expect = 8e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| || ||||| |||||||| || | || || | ||||| | ||| Sbjct 96625 TGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCTTCCAATTGC 96566 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || ||||| | || | ||||||||||| || ||||| |||||||| || || || || Sbjct 96565 TTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTTG 96506 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| ||| || | || || | || || || | || | ||| || || ||| Sbjct 96505 GCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTTTTACCCGTC 96446 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 || ||||| ||||| |||||||| Sbjct 96445 AATGTTTTGACGAAGATTTGCAT 96423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499613590936680