Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1280 203 3e-47 seq29 113 4e-20 seq108 95.1 1e-14 >seq1280 Length=9399 Score = 203 bits (224), Expect = 3e-47 Identities = 1144/1800 (64%), Gaps = 55/1800 (3%) Strand=Plus/Minus Query 152685 TCAACGGTAAACTGTTGTGTGTGCGCCGCAGGCTTTGTGCGCAAATAATACATGCCCGTT 152744 || || || ||||| || || || || ||||| ||||||||||| ||||| || || Sbjct 3269 TCGACTGTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCCGGTC 3210 Query 152745 TTGAGGCCGCAGCGCCA--CGAGTAATTGTGAATCGAAGTCATCACAGCGTACGTCGGTT 152802 || | ||| ||| || | || |||||| || |||| |||| | || | Sbjct 3209 TTCAAGCCCATTTTCCAGCCGTGGAA--GTGAATTGACGTCAGTTTTCCGTAGTTTGGCT 3152 Query 152803 GCGCCACGAACAGATTAAACGATTGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCA 152862 || ||| || || || || || |||||| ||||| || || ||||| |||| Sbjct 3151 CGGCGACGTGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGCCA 3092 Query 152863 TCTCAATCATGCGTTTTGCCTT-CATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTA 152921 ||| ||| ||||| ||| || |||||||||| |||| |||||||| | | | Sbjct 3091 TCTGGATC-TGCGTCTTGACTGACATCTCCCAGACGGTCTTGTACAACTCGCGGATGTCG 3033 Query 152922 TCCGGTATACCTTCAATGTTCTGAATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATT 152981 | || || || |||||||||| || || ||| || | || |||| || Sbjct 3032 GCGGGGATCTTCTCGATGTTCTGAACTGATCCGTTGCTAGCGATGATCTCGTTCTTCATG 2973 Query 152982 TCG--GGC---GTGTACACGTTCAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCA 153036 ||| | | | | | ||||| || ||| || | ||| | | || ||||| | Sbjct 2972 TCGTCGTCCCAGAGATCTCGTTCGGT-----GAGATCCTTGATGAGATGGTGATTGACGA 2918 Query 153037 CTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGG 153096 ||||| || || || | || | || || ||||| ||| | || || ||| Sbjct 2917 TCTGAAATTCTCCGCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGC 2858 Query 153097 ATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAG 153156 |||||| ||||| || || || || || | || |||||||| || | | | | Sbjct 2857 TTTCGTTGTTGCCGAGAATCTGTGCAGTCGAAGCAGTCGGCATTGGAGCGAGGAGAAGTG 2798 Query 153157 AATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCG 153216 |||| |||| |||||| | || | |||||| | ||| ||||||| | Sbjct 2797 AATTGCGCACTCCGTGCTCGGCGATCTTAGCCTTCAGGACAGCCCAGTCCCACAAGTTGG 2738 Query 153217 ACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCT--CGACTGGCGGGACTGCCGGC 153274 |||||| | ||||||||||||||| || | |||| |||| | || || | Sbjct 2737 TTGGTGTCTTTTCCCACATGTCGTACTGCAAGATTCCTTTCGACACCGGCGAT--CCTTC 2680 Query 153275 AAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATA 153334 | || ||| | ||| | ||| ||||| || || ||||| |||||||| || Sbjct 2679 GTAGGTTTCGTAAGTACCGAGCTCTCTGGCGAGTTCACAACTTGCCTCAAGCGCGCCGTA 2620 Query 153335 GTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCT-CTCGTACGGCA 153393 ||| || || ||| ||| || | || || || | || || |||| |||| Sbjct 2619 GTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGT-TTGGCGACTCGAACGGAT 2561 Query 153394 TGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCT 153453 | || | | || ||||||||||| || || || |||| ||||| || ||||| Sbjct 2560 AACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGATGAC 2501 Query 153454 TCTCGTTGCTGCGCCTCGCGCTC-GCTATGGGATAGTGATTGCGATCGATAATTTTGTTG 153512 | ||| ||| | || ||| | || || |||| ||| |||||| || ||||| Sbjct 2500 GCATGTTCGATCGCTTAGC-CTCTGGGATCGGGTAGTAGTTGACATCGATGATCTTGTTC 2442 Query 153513 AGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCATTTCG 153572 | ||| || || || | |||| || || | ||| || || ||| || | Sbjct 2441 AAGTTCTTTGTGACAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAAGTC--TTGG 2384 Query 153573 TCGACGCGTACGCATCGAT--TCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTT 153630 || |||| | || || | || || || || |||||||| |||||||| ||| Sbjct 2383 CTGATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACGGCGA---CTT 2327 Query 153631 CGGCGTCGCTG---TACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCA 153687 || | | |||| |||| | ||| || | ||| | |||| ||| ||| ||| | Sbjct 2326 CGTCCTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGA 2267 Query 153688 AATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGG 153747 || ||||| || || || ||||| ||||| ||| | | |||||| || ||| | Sbjct 2266 CGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAG 2207 Query 153748 TCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCC 153804 |||||||||| | |||| ||| ||||| || ||| || || | | | | Sbjct 2206 TCTCGACTTGTGACTCGATGATGGCAAACCA---CAAGTCTTGAGCCTTGATCTGGCGGA 2150 Query 153805 GATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGT 153864 | || ||||| ||| ||||||| |||||||| ||| ||||| ||||| | ||| Sbjct 2149 GGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCCCCACGAGT 2090 Query 153865 CGGCGAGGCCGGGACA-CTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACG 153923 || |||||| ||||| ||| ||||||||||||| |||||| | ||| | | ||| Sbjct 2089 CGTAGAGGCCTGGACAGCTG-TGCGGACACATCAACGACCAGACTCCGTTGCTTTCAACG 2031 Query 153924 CGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCC 153983 || |||||||||| ||| || | ||| | ||||| | | ||| || || || Sbjct 2030 CGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGAACTTCT 1971 Query 153984 TCCGCGCCCATGTTGCGTTTCAGATTGA-GCACGCTATAGATGTCGGCGTGCCAGGGTTC 154042 || ||| |||| || |||| || | || | | ||| |||| ||||||| || || Sbjct 1970 TCTTTGCCAGTGTTTTTCTTGAGATCGAGGAACTCGA-AGACGTCGCCGTGCCACGGCTC 1912 Query 154043 AATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCGCACCAT 154099 | || | || | |||||| ||| |||||||| || || || | ||| | | Sbjct 1911 GAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGT 1852 Query 154100 ATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGAT 154159 |||||| | || |||| ||| || | || ||| ||| | | |||||||| ||| Sbjct 1851 GTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGAT 1792 Query 154160 CTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCC-GCCGTACTTTG 154218 | | || |||||| | |||||||| || || || ||||| |||| |||| Sbjct 1791 ATACGTTCCCTTGGCGCGAATACAGTGCACGTTGACACCGATACCGCCAGCCG-ACTTGC 1733 Query 154219 ATATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGC 154278 || |||||| | |||||| ||| |||||||| || || | ||||| Sbjct 1732 TGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCAT--CGGACAT 1675 Query 154279 CG--AGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGG 154336 || | |||||||||||| | | ||||| |||| | || | ||||| || || Sbjct 1674 CGACAACAAGAAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGG 1615 Query 154337 ACTCGCGTGCGT-AAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGA 154395 || || || || || || | || | | ||| || || ||||| |||| Sbjct 1614 CGAGGCATGGGTGAAGTAGCGTTCAG-ACAAAAGGTTGTAAGTCTCAATGGCCGAGTCGA 1556 Query 154396 TATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGA 154455 | || || || || ||||| | || || | |||||||||||| ||||| || ||||||| Sbjct 1555 TGTCTTCACCATGGATGCCCACGGCAACTCTCATGAGCATGTGTTGCGGGCGCTCGGCGA 1496 >seq29 Length=258594 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || || || | | ||||||||||| ||||||||||||||| Sbjct 96649 CCACCACGCAGACGGAGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTC 96590 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | |||||| || || | ||| || |||| |||| | ||||| ||||| || || Sbjct 96589 AGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 96530 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| ||| || || | | ||| | ||||| | | ||| ||| Sbjct 96529 ATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACC 96470 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGC 138617 |||| || | |||||||| |||| ||||| || || || |||||||| Sbjct 96469 TCGAGGGTAATGGTTTTACCCGTCAATGTTTTGACGAAGATTTGCATGGC 96420 >seq108 Length=162490 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | |||||||| |||||||||||||||||| Sbjct 111837 CCACCACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTC 111896 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || || || || || | |||| |||||||| || || ||||| Sbjct 111897 AATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 111956 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| ||||| ||| || || | | ||| | ||||| | | ||| ||| Sbjct 111957 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACC 112016 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || || || || ||||| || || || ||||| Sbjct 112017 TCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496231402209840