Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq108 134 1e-26
seq29 123 2e-23
seq1280 93.3 4e-14
seq1975 91.5 1e-13
>seq108
Length=162490
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||| || | || ||||| || ||||| ||||| |||| |
Sbjct 111837 CCACCACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTC 111896
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || |||||| |||||| ||||||||||| |||||
Sbjct 111897 AATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 111956
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||| |||||||| ||| || ||||| | ||| | ||||||| ||||||
Sbjct 111957 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACC 112016
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| ||| | || |||||||| || ||||| || || || |||||
Sbjct 112017 TCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063
>seq29
Length=258594
Score = 123 bits (136), Expect = 2e-23
Identities = 167/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | || | ||||| || | || ||||| ||||| || ||||| |||
Sbjct 96652 GCACCACCACGCAGACGGAGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCG 96593
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| || || || ||| || | || ||||| ||| |||||||||||||||| || ||
Sbjct 96592 CTCAGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGG 96533
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| ||||| || |||||| ||| || ||||| | ||||| ||||||| |||
Sbjct 96532 GGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCA 96473
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116
|| |||| ||| | ||||| || |||| ||||| || || || ||||||||
Sbjct 96472 ACCTCGAGGGTAATGGTTTTACCCGTCAATGTTTTGACGAAGATTTGCATGGC 96420
>seq1280
Length=9399
Score = 93.3 bits (102), Expect = 4e-14
Identities = 303/461 (66%), Gaps = 10/461 (2%)
Strand=Plus/Minus
Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778
|||||| |||||||| | || | || || || || ||||||| ||||||||| |||||
Sbjct 3270 GTCGACTGTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCCGGT 3211
Query 145779 CTTGA-GCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA--TGACCGAGTACGTGGG 145835
||| | || || | ||| || ||||| || || || | ||| || | ||
Sbjct 3210 CTTCAAGCCCATTTT-CCAGCCGTGGAAGTGAATTGACGTCAGTTTTCCG--TAGTTTGG 3154
Query 145836 TTCGGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGC 145895
|||||||| || || | || || |||||| ||||| | | | || ||||| ||
Sbjct 3153 CTCGGCGACGTGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGC 3094
Query 145896 CATGTCTATCATGCACTTTGATTTA-ATTTCCCATGCGGTTTTAAAGAGATCCTTGACGT 145954
||| | ||| ||| |||| | | || ||||| |||| || | | || || ||
Sbjct 3093 CATCTGGATC-TGCGTCTTGACTGACATCTCCCAGACGGTCTTGTACAACTCGCGGATGT 3035
Query 145955 GCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGCA 146014
||| || | || |||||||| || || || || || | || | ||| ||
Sbjct 3034 CGGCGGGGATCTTCTCGATGTTCTGAACTGATCCGTTGCTAGCGATGATCTCGTTCTTCA 2975
Query 146015 ATTCTGGAGTGTAAATGTTCAAGT-CTACGAGGGCCTTGATGAGATACTGGTTGACCACC 146073
|| | || | | || || | ||| |||||||||||| || ||||| | |
Sbjct 2974 TGTC-GTCGTCCCAGAGATCTCGTTCGGTGAGATCCTTGATGAGATGGTGATTGACGATC 2916
Query 146074 TGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGAC 146133
||||| || ||| || ||| | || |||||||||||| ||||||||||
Sbjct 2915 TGAAATTCTCCGCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGCTT 2856
Query 146134 TCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCAT 146174
|||||||| ||||| ||||| || |||| ||| || |||||
Sbjct 2855 TCGTTGTTGCCGAGAATCTGTGCAGTCGAAGCAGTCGGCAT 2815
>seq1975
Length=2172
Score = 91.5 bits (100), Expect = 1e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
||||| || | || || ||||| || || ||||| |||| || |||||| ||| ||
Sbjct 2005 ACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCG 2064
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| |||||||| |||||||||||||||| || || || || || ||||| ||| |
Sbjct 2065 AGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTATCCTGG 2124
Query 127025 ATTTT 127029
|| ||
Sbjct 2125 ATCTT 2129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475471099031280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |