Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq108 134 1e-26 seq29 123 2e-23 seq1280 93.3 4e-14 seq1975 91.5 1e-13 >seq108 Length=162490 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || ||||| || ||||| ||||| |||| | Sbjct 111837 CCACCACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTC 111896 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || |||||| |||||| ||||||||||| ||||| Sbjct 111897 AATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGA 111956 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||| |||||||| ||| || ||||| | ||| | ||||||| |||||| Sbjct 111957 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACC 112016 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || |||||||| || ||||| || || || ||||| Sbjct 112017 TCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063 >seq29 Length=258594 Score = 123 bits (136), Expect = 2e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | ||||| || | || ||||| ||||| || ||||| ||| Sbjct 96652 GCACCACCACGCAGACGGAGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCG 96593 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || || || ||| || | || ||||| ||| |||||||||||||||| || || Sbjct 96592 CTCAGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGG 96533 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || ||||| || |||||| ||| || ||||| | ||||| ||||||| ||| Sbjct 96532 GGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCA 96473 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGC 127116 || |||| ||| | ||||| || |||| ||||| || || || |||||||| Sbjct 96472 ACCTCGAGGGTAATGGTTTTACCCGTCAATGTTTTGACGAAGATTTGCATGGC 96420 >seq1280 Length=9399 Score = 93.3 bits (102), Expect = 4e-14 Identities = 303/461 (66%), Gaps = 10/461 (2%) Strand=Plus/Minus Query 145719 GTCGACGGTGAACTGCGTCGCTTGAGCGGCCGGTTTTGTGCGCAGATAGTACATGCCGGT 145778 |||||| |||||||| | || | || || || || ||||||| ||||||||| ||||| Sbjct 3270 GTCGACTGTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCCGGT 3211 Query 145779 CTTGA-GCTGTTTCTGCCACGTGTAAAAGTGTATGCTCGACA--TGACCGAGTACGTGGG 145835 ||| | || || | ||| || ||||| || || || | ||| || | || Sbjct 3210 CTTCAAGCCCATTTT-CCAGCCGTGGAAGTGAATTGACGTCAGTTTTCCG--TAGTTTGG 3154 Query 145836 TTCGGCGACAAACAAATTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGC 145895 |||||||| || || | || || |||||| ||||| | | | || ||||| || Sbjct 3153 CTCGGCGACGTGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGC 3094 Query 145896 CATGTCTATCATGCACTTTGATTTA-ATTTCCCATGCGGTTTTAAAGAGATCCTTGACGT 145954 ||| | ||| ||| |||| | | || ||||| |||| || | | || || || Sbjct 3093 CATCTGGATC-TGCGTCTTGACTGACATCTCCCAGACGGTCTTGTACAACTCGCGGATGT 3035 Query 145955 GCTGGGGTATTTCGTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGCA 146014 ||| || | || |||||||| || || || || || | || | ||| || Sbjct 3034 CGGCGGGGATCTTCTCGATGTTCTGAACTGATCCGTTGCTAGCGATGATCTCGTTCTTCA 2975 Query 146015 ATTCTGGAGTGTAAATGTTCAAGT-CTACGAGGGCCTTGATGAGATACTGGTTGACCACC 146073 || | || | | || || | ||| |||||||||||| || ||||| | | Sbjct 2974 TGTC-GTCGTCCCAGAGATCTCGTTCGGTGAGATCCTTGATGAGATGGTGATTGACGATC 2916 Query 146074 TGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGAC 146133 ||||| || ||| || ||| | || |||||||||||| |||||||||| Sbjct 2915 TGAAATTCTCCGCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGCTT 2856 Query 146134 TCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCAT 146174 |||||||| ||||| ||||| || |||| ||| || ||||| Sbjct 2855 TCGTTGTTGCCGAGAATCTGTGCAGTCGAAGCAGTCGGCAT 2815 >seq1975 Length=2172 Score = 91.5 bits (100), Expect = 1e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || ||||| || || ||||| |||| || |||||| ||| || Sbjct 2005 ACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTCG 2064 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||| |||||||| |||||||||||||||| || || || || || ||||| ||| | Sbjct 2065 AGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTATCCTGG 2124 Query 127025 ATTTT 127029 || || Sbjct 2125 ATCTT 2129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475471099031280