Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 244 1e-59
seq29 122 8e-23
seq108 89.7 5e-13
>seq1280
Length=9399
Score = 244 bits (270), Expect = 1e-59
Identities = 945/1472 (64%), Gaps = 37/1472 (3%)
Strand=Plus/Plus
Query 122828 CCTCGATTACGAATACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaa 122887
|| ||| | || ||||| || || |||| ||| || || || | | || ||| ||
Sbjct 1422 CCGCGACTTCGGCTACAATTACTTCGGATTCAAGACTTTGGAGCGCAGCTACTTGCTGAA 1481
Query 122888 aaTCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGT 122947
| | | | ||| ||||||| || ||||| ||||||||| | || || | ||| |
Sbjct 1482 GAACAAAGGCAAGATCGCCGAGCGCCCGCAACACATGCTCATGAGAGTTGCCGTGGGCAT 1541
Query 122948 GCACGGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTT 123007
|| || |||||||| || | || |||||| | | ||||| || | ||
Sbjct 1542 CCATGGTGAAGACATCGACTCGGCCATTGAGACTTACAACCTTTTGTCTGAACGCTACTT 1601
Query 123008 CACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTG 123067
||| || || || ||| | |||||||||| ||| || ||| | || |||||
Sbjct 1602 CACCCATGCCTCGCCAACTCTCTTCGCCGCCGCTACGCCTCGCCCGCAGCTTTCGTCGTG 1661
Query 123068 TTTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTG 123127
||| ||| | | || ||| ||| || ||| || || || || || | ||
Sbjct 1662 TTTCTTGTTGTCGATGTCCGATGACTCAATTGACGGCATTTACGATACGCTGAAACAATG 1721
Query 123128 CGCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCG 123187
||| ||||| ||| | | ||||| || || || ||||||||| | | | |
Sbjct 1722 CGCTTTGATCAGCAAGTCGGCTGGCGGTATCGGTGTCAACGTGCACTGTATTCGCGCCAA 1781
Query 123188 CGGAAGCCGCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGT 123247
|||| ||| ||||| |||| ||| | ||| || | | ||| |||| ||
Sbjct 1782 GGGAACGTATATCGCCGGCACCAACGGGATCTCAAACGGACTTGTTCCAATGTTGCGTGT 1841
Query 123248 TTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAA-ACGCAA--AGGCGCGATGGC 123304
|||||| ||| ||| || | || ||||| ||||| || | || | ||| || | ||
Sbjct 1842 TTACAACAACACCGCTCGCTATGTAGACCAAGGCGGAAACAAGCGACCAGGTGCTTTCGC 1901
Query 123305 GATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACAT 123364
|| ||||| || |||||||||| || || | ||| || | || | || ||||
Sbjct 1902 AATTTATCTCGAGCCGTGGCACGGCGACGTCTTCGAGTTCCTCGATCTCAAGAAAAACAC 1961
Query 123365 GGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTT 123424
|| |||||| || || || |||| |||||||| ||| | |||||||||||
Sbjct 1962 TGGCAAAGAAGAAGTTCGTGCTCGTGACATGTTCTACGCTTTGTGGATTCCCGATTTGTT 2021
Query 123425 TATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGG 123484
||||| ||||| || | |||| || |||||| | |||||||| | | ||||| ||
Sbjct 2022 CATGCGTCGCGTTGAAAGCAACGGAGTCTGGTCGTTGATGTGTCCGCACAGCTGTCCAGG 2081
Query 123485 CTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGG 123544
| | |||| | ||| | |||| || ||||||||| | |||||| ||||||
Sbjct 2082 CCTCTACGACTCGTGGGGCGAAGAGTTCGAGAAGTTGTACGAGAGATACGAAGCCGAAGG 2141
Query 123545 CAAACAGGTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTT---ATTATCGAAACACA 123601
| | | | ||| | ||| | || |||| ||| || ||||| ||||
Sbjct 2142 CCGTTACCTCCGCCAGATCAAGGCTCAAGACTTGT---GGTTTGCCATCATCGAGTCACA 2198
Query 123602 AGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCA 123661
|||||| || || ||||| |||||| | ||||| ||||| |||||| | || | || ||
Sbjct 2199 AGTCGAGACTGGCACGCCTTACATGTTGTACAAGGACGCTTGCAACCGAAAGTCGAACCA 2258
Query 123662 GAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATA---CAG 123718
| ||| | || || || || || | ||| | ||||| ||||| || |||
Sbjct 2259 GCAGAACGTCGGCACCATTCGTTGCTCCAACTTGTGCACGGAAATCATCGAGTATTCCAG 2318
Query 123719 CGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGA--ATCGTTGCGTC 123776
| | | || |||| ||||| || ||| |||| ||||| || | || ||| |
Sbjct 2319 CAAGGACG---AAGTCGCCGTCTGCAATCTGGCATCGATCGCTGTCAACATGTTTGTGAA 2375
Query 123777 GAAAACGGC----GCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAA 123832
| | || ||| | ||||||| |||||| | || || ||||| |||
Sbjct 2376 CGCATCAGCCAAGACTTACGACTTCCAAAAGCTCAAGGAAGTCACCAAGACTGTCACAAA 2435
Query 123833 GAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTT---GGAGG--AAGCGCGTTTG 123887
||| |||||||| || |||||||| || | || || | |||| |||||
Sbjct 2436 GAACTTGAACAAGATCATCGATGTCAACTACTACCCGATCCCAGAGGCTAAGCG-----A 2490
Query 123888 TCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTA 123947
|| || || || | ||| |||| | ||||||||||| |||||||||| || |
Sbjct 2491 TCGAACATGCGTCATCGCCCGATCGGTATCGGCATTCAAGGCCTGGCCGACGCTTTCATC 2550
Query 123948 ATGCTGCGCATGCCGTACGAAAGCGACGAA-GCAAAGTTGCTTAATACGCAAATAGCCGA 124006
| | || | |||| || | || | || ||| || ||| || ||| || |||
Sbjct 2551 ACGATGAGTTATCCGTTCG-AGTCGCCAAACGCACAGAAGCTGAACCAGCAGATCTTCGA 2609
Query 124007 AACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTA 124066
|| || || |||||||| | ||||| || || ||||| || | | | ||| | ||
Sbjct 2610 GACGATCTACTACGGCGCGCTTGAGGCAAGTTGTGAACTCGCCAGAGAGCTCGGTACTTA 2669
Query 124067 CGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGC 124126
||||| |||| || |||| | ||| || |||||||||||||||||| |
Sbjct 2670 CGAAACCTACGAAGGATCGCCGGTGTCGAAAGGAATCTTGCAGTACGACATGTGGGAAAA 2729
Query 124127 TACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGAC--GCACGGT 124184
||||| || || |||||||||||| || | || | | |||| | ||||||
Sbjct 2730 GACACCAACCAACTTGTGGGACTGGGCTGTCCTGAA--GGCTAAGATCGCCGAGCACGGA 2787
Query 124185 TTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGA 124244
|||| || || || | | || |||||||| || | ||||| || ||| | ||
Sbjct 2788 GTGCGCAATTCACTTCTCCTCGCTCCAATGCCGACTGCTTCGACTGCACAGATTCTCGGC 2847
Query 124245 AACAACGAATCCTTCGAGCCGTTCACTAACAA 124276
||||||||| ||||||||||| ||| | |||
Sbjct 2848 AACAACGAAAGCTTCGAGCCGTACACCAGCAA 2879
>seq29
Length=258594
Score = 122 bits (134), Expect = 8e-23
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||||||||| || || ||||| | || ||| ||||||||
Sbjct 96625 TGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCTTCCAATTGC 96566
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
||||| ||| | |||||||| |||||||| || |||||||||||||| || || || ||
Sbjct 96565 TTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTTG 96506
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|||| ||| | ||||| || | ||| || ||||| |||| ||||| || ||
Sbjct 96505 GCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTTTTACCCGTC 96446
Query 45318 AGAGTTTTTACAAAAATTTGCATCGCG 45344
| ||||| || || |||||||| |||
Sbjct 96445 AATGTTTTGACGAAGATTTGCATGGCG 96419
>seq108
Length=162490
Score = 89.7 bits (98), Expect = 5e-13
Identities = 142/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197
|| || || || ||||| || || || || ||||| | || | || || | ||
Sbjct 111861 TGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCAAGCTGC 111920
Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257
|| || ||| | |||| || ||||| || || ||||||||||| || ||||| || ||
Sbjct 111921 TTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTG 111980
Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317
|||| ||| | ||||| || | |||||| ||||| || | || ||||||||
Sbjct 111981 GCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTG 112040
Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341
|| ||||| || || |||||||||
Sbjct 112041 AGGGTTTTCACGAAGATTTGCATC 112064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451974966750120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |