Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1280 244 1e-59 seq29 122 8e-23 seq108 89.7 5e-13 >seq1280 Length=9399 Score = 244 bits (270), Expect = 1e-59 Identities = 945/1472 (64%), Gaps = 37/1472 (3%) Strand=Plus/Plus Query 122828 CCTCGATTACGAATACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaa 122887 || ||| | || ||||| || || |||| ||| || || || | | || ||| || Sbjct 1422 CCGCGACTTCGGCTACAATTACTTCGGATTCAAGACTTTGGAGCGCAGCTACTTGCTGAA 1481 Query 122888 aaTCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGT 122947 | | | | ||| ||||||| || ||||| ||||||||| | || || | ||| | Sbjct 1482 GAACAAAGGCAAGATCGCCGAGCGCCCGCAACACATGCTCATGAGAGTTGCCGTGGGCAT 1541 Query 122948 GCACGGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTT 123007 || || |||||||| || | || |||||| | | ||||| || | || Sbjct 1542 CCATGGTGAAGACATCGACTCGGCCATTGAGACTTACAACCTTTTGTCTGAACGCTACTT 1601 Query 123008 CACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTG 123067 ||| || || || ||| | |||||||||| ||| || ||| | || ||||| Sbjct 1602 CACCCATGCCTCGCCAACTCTCTTCGCCGCCGCTACGCCTCGCCCGCAGCTTTCGTCGTG 1661 Query 123068 TTTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTG 123127 ||| ||| | | || ||| ||| || ||| || || || || || | || Sbjct 1662 TTTCTTGTTGTCGATGTCCGATGACTCAATTGACGGCATTTACGATACGCTGAAACAATG 1721 Query 123128 CGCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCG 123187 ||| ||||| ||| | | ||||| || || || ||||||||| | | | | Sbjct 1722 CGCTTTGATCAGCAAGTCGGCTGGCGGTATCGGTGTCAACGTGCACTGTATTCGCGCCAA 1781 Query 123188 CGGAAGCCGCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGT 123247 |||| ||| ||||| |||| ||| | ||| || | | ||| |||| || Sbjct 1782 GGGAACGTATATCGCCGGCACCAACGGGATCTCAAACGGACTTGTTCCAATGTTGCGTGT 1841 Query 123248 TTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAA-ACGCAA--AGGCGCGATGGC 123304 |||||| ||| ||| || | || ||||| ||||| || | || | ||| || | || Sbjct 1842 TTACAACAACACCGCTCGCTATGTAGACCAAGGCGGAAACAAGCGACCAGGTGCTTTCGC 1901 Query 123305 GATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACAT 123364 || ||||| || |||||||||| || || | ||| || | || | || |||| Sbjct 1902 AATTTATCTCGAGCCGTGGCACGGCGACGTCTTCGAGTTCCTCGATCTCAAGAAAAACAC 1961 Query 123365 GGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTT 123424 || |||||| || || || |||| |||||||| ||| | ||||||||||| Sbjct 1962 TGGCAAAGAAGAAGTTCGTGCTCGTGACATGTTCTACGCTTTGTGGATTCCCGATTTGTT 2021 Query 123425 TATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGG 123484 ||||| ||||| || | |||| || |||||| | |||||||| | | ||||| || Sbjct 2022 CATGCGTCGCGTTGAAAGCAACGGAGTCTGGTCGTTGATGTGTCCGCACAGCTGTCCAGG 2081 Query 123485 CTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGG 123544 | | |||| | ||| | |||| || ||||||||| | |||||| |||||| Sbjct 2082 CCTCTACGACTCGTGGGGCGAAGAGTTCGAGAAGTTGTACGAGAGATACGAAGCCGAAGG 2141 Query 123545 CAAACAGGTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTT---ATTATCGAAACACA 123601 | | | | ||| | ||| | || |||| ||| || ||||| |||| Sbjct 2142 CCGTTACCTCCGCCAGATCAAGGCTCAAGACTTGT---GGTTTGCCATCATCGAGTCACA 2198 Query 123602 AGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCA 123661 |||||| || || ||||| |||||| | ||||| ||||| |||||| | || | || || Sbjct 2199 AGTCGAGACTGGCACGCCTTACATGTTGTACAAGGACGCTTGCAACCGAAAGTCGAACCA 2258 Query 123662 GAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATA---CAG 123718 | ||| | || || || || || | ||| | ||||| ||||| || ||| Sbjct 2259 GCAGAACGTCGGCACCATTCGTTGCTCCAACTTGTGCACGGAAATCATCGAGTATTCCAG 2318 Query 123719 CGATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGA--ATCGTTGCGTC 123776 | | | || |||| ||||| || ||| |||| ||||| || | || ||| | Sbjct 2319 CAAGGACG---AAGTCGCCGTCTGCAATCTGGCATCGATCGCTGTCAACATGTTTGTGAA 2375 Query 123777 GAAAACGGC----GCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAA 123832 | | || ||| | ||||||| |||||| | || || ||||| ||| Sbjct 2376 CGCATCAGCCAAGACTTACGACTTCCAAAAGCTCAAGGAAGTCACCAAGACTGTCACAAA 2435 Query 123833 GAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTT---GGAGG--AAGCGCGTTTG 123887 ||| |||||||| || |||||||| || | || || | |||| ||||| Sbjct 2436 GAACTTGAACAAGATCATCGATGTCAACTACTACCCGATCCCAGAGGCTAAGCG-----A 2490 Query 123888 TCTAATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTA 123947 || || || || | ||| |||| | ||||||||||| |||||||||| || | Sbjct 2491 TCGAACATGCGTCATCGCCCGATCGGTATCGGCATTCAAGGCCTGGCCGACGCTTTCATC 2550 Query 123948 ATGCTGCGCATGCCGTACGAAAGCGACGAA-GCAAAGTTGCTTAATACGCAAATAGCCGA 124006 | | || | |||| || | || | || ||| || ||| || ||| || ||| Sbjct 2551 ACGATGAGTTATCCGTTCG-AGTCGCCAAACGCACAGAAGCTGAACCAGCAGATCTTCGA 2609 Query 124007 AACAATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTA 124066 || || || |||||||| | ||||| || || ||||| || | | | ||| | || Sbjct 2610 GACGATCTACTACGGCGCGCTTGAGGCAAGTTGTGAACTCGCCAGAGAGCTCGGTACTTA 2669 Query 124067 CGAAAGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGC 124126 ||||| |||| || |||| | ||| || |||||||||||||||||| | Sbjct 2670 CGAAACCTACGAAGGATCGCCGGTGTCGAAAGGAATCTTGCAGTACGACATGTGGGAAAA 2729 Query 124127 TACACCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGAC--GCACGGT 124184 ||||| || || |||||||||||| || | || | | |||| | |||||| Sbjct 2730 GACACCAACCAACTTGTGGGACTGGGCTGTCCTGAA--GGCTAAGATCGCCGAGCACGGA 2787 Query 124185 TTGCGTAACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGA 124244 |||| || || || | | || |||||||| || | ||||| || ||| | || Sbjct 2788 GTGCGCAATTCACTTCTCCTCGCTCCAATGCCGACTGCTTCGACTGCACAGATTCTCGGC 2847 Query 124245 AACAACGAATCCTTCGAGCCGTTCACTAACAA 124276 ||||||||| ||||||||||| ||| | ||| Sbjct 2848 AACAACGAAAGCTTCGAGCCGTACACCAGCAA 2879 >seq29 Length=258594 Score = 122 bits (134), Expect = 8e-23 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||||||||| || || ||||| | || ||| |||||||| Sbjct 96625 TGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCTTCCAATTGC 96566 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 ||||| ||| | |||||||| |||||||| || |||||||||||||| || || || || Sbjct 96565 TTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTTG 96506 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| ||| | ||||| || | ||| || ||||| |||| ||||| || || Sbjct 96505 GCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTTTTACCCGTC 96446 Query 45318 AGAGTTTTTACAAAAATTTGCATCGCG 45344 | ||||| || || |||||||| ||| Sbjct 96445 AATGTTTTGACGAAGATTTGCATGGCG 96419 >seq108 Length=162490 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || || ||||| || || || || ||||| | || | || || | || Sbjct 111861 TGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCAAGCTGC 111920 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || ||| | |||| || ||||| || || ||||||||||| || ||||| || || Sbjct 111921 TTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTG 111980 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 |||| ||| | ||||| || | |||||| ||||| || | || |||||||| Sbjct 111981 GCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTG 112040 Query 45318 AGAGTTTTTACAAAAATTTGCATC 45341 || ||||| || || ||||||||| Sbjct 112041 AGGGTTTTCACGAAGATTTGCATC 112064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451974966750120