Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq596 192 9e-44 seq1280 170 3e-37 >seq596 Length=46163 Score = 192 bits (212), Expect = 9e-44 Identities = 502/757 (66%), Gaps = 13/757 (2%) Strand=Plus/Plus Query 159627 ACTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTG 159686 |||| | ||||| ||| ||||||||||| || || ||||| ||||| | || || | Sbjct 2486 ACTTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCG 2545 Query 159687 ATTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCA 159746 |||||||||| ||| || || || | ||| ||| || ||| || | | || Sbjct 2546 ATTCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACA 2605 Query 159747 GCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCA 159806 | | | || ||||| || |||||||| | |||| | | ||||| || || |||| Sbjct 2606 GAAGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCA 2665 Query 159807 -GCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACA 159865 | | || || || || || | ||||||||| | ||||||| || || || | | Sbjct 2666 TGTCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATG 2724 Query 159866 ATCTGCGA-GACACGTTCGTACCCCGGCT--TGCCCAAAATGTGGTCCTTAAACAGGAGG 159922 |||| ||| || ||||| | |||| || ||| |||| | |||| ||| Sbjct 2725 ATCT-CGATAACGCGTTCCTTTGGTGGCTTCTGTTCAAGATGT-----CTGAACATCAGG 2778 Query 159923 CACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGG 159982 || |||||||| ||||||| |||||||| || ||||||| ||||| || | | |||| Sbjct 2779 CAAGCAAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGA 2838 Query 159983 CCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAG 160042 || ||||| | || ||| |||||||| || || | ||||| ||||| || || Sbjct 2839 CCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAA 2898 Query 160043 ATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGG 160102 || || || || || ||||| || | | | || ||||| || || ||| | Sbjct 2899 ATTCCTTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCG 2958 Query 160103 GTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTA 160162 |||| |||||| |||||||| || | ||||| | |||||||||||| Sbjct 2959 ATCCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTG 3018 Query 160163 AACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222 || | ||| ||||||| || | || || |||| || ||||||||| Sbjct 3019 AAAAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATC 3078 Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282 || | ||| |||||||| ||||| ||||| ||| ||||| | |||| | | || Sbjct 3079 TCGGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCT-CTGTGAC 3137 Query 160283 -TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGC 160341 ||||| ||||| |||||| || | | || || | ||||| | ||||||| || || Sbjct 3138 TTGCACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGC 3197 Query 160342 AAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCG 160378 ||||| |||| || || ||||| ||||| | |||| Sbjct 3198 GAAGAAGGCCAGAACATGGGAGATAAAATGACGCTCG 3234 >seq1280 Length=9399 Score = 170 bits (188), Expect = 3e-37 Identities = 339/495 (68%), Gaps = 8/495 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898 |||||| || ||||||||||| ||||| | || ||| || | | || ||||||||| || Sbjct 3273 CTTGTCGACTGTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCC 3214 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958 |||||| | |||| | | ||| |||| | ||| || || | |||||| | ||| || Sbjct 3213 GGTCTTCAAGCCCATTTTCCAGCCGTGGAAGTGAATTGACGTCAGTTTTCCGTAGTTTGG 3154 Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGC 204018 ||||| | ||| | ||| | ||||| || |||||||| | | ||||| || || Sbjct 3153 CTCGGCGACGTGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGC 3094 Query 204019 CATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGT- 204077 ||| | ||| ||||| || |||||||| || |||||| ||| || | | ||| Sbjct 3093 CATCTGGATCTGCGTCTTGACTGACATCTCCCAGACGGTCTTGTACAACTCGCGGATGTC 3034 Query 204078 GTTGAGGCACATCTTC-CCACGTCCTGATC-GAGCCGTTGTCGGCCATCAGTCTC-ATCC 204134 | | || |||||| | | || |||| | || |||||| || || | |||| || Sbjct 3033 GGCGGGG---ATCTTCTCGATGTTCTGAACTGATCCGTTGCTAGCGATGA-TCTCGTTCT 2978 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGA 204194 || | || || |||| | | | | || ||| | || ||| | |||| || Sbjct 2977 TCATGTCGTCGTCCCAGAGATCTCGTTCGGTGAGATCCTTGATGAGATGGTGATTGACGA 2918 Query 204195 TCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACG 204254 ||||||| |||||| |||| | ||| || | | |||| ||||| | || ||||| Sbjct 2917 TCTGAAATTCTCCGCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGC 2858 Query 204255 CCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGG 204314 ||||||||||||| |||||| || || || || ||||| ||||| ||||| || | Sbjct 2857 TTTCGTTGTTGCCGAGAATCTGTGCAGTCGAAGCAGTCGGCATTGGAGCGAGGAGAAGTG 2798 Query 204315 AGTTGCGCACACCGT 204329 | |||||||| |||| Sbjct 2797 AATTGCGCACTCCGT 2783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795105532618320