Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq29 143 6e-29 seq108 127 5e-24 seq1975 100 7e-16 >seq29 Length=258594 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || |||||||||||||||| ||||||||| || ||| | ||||||| Sbjct 96634 AGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCT 96575 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||| ||||||||||||||||| | ||||||||||| || ||| |||||| ||| Sbjct 96574 TCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCC 96515 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || ||||| ||||| | || || || || | || || || Sbjct 96514 TGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTT 96455 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| | ||||| || || ||||| Sbjct 96454 TTACCCGTCAATGTTTTGACGAAGATTTG 96426 >seq108 Length=162490 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| || ||||||||||| || | ||||||||| ||| || Sbjct 111843 CGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTG 111902 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| |||||||| || |||||||| ||||||||||| || ||| ||| ||| Sbjct 111903 CGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCT 111962 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||| || ||| | ||||| | || || || || | Sbjct 111963 TCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGG 112022 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| |||||||| || ||||| Sbjct 112023 GTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTG 112060 >seq1975 Length=2172 Score = 100 bits (110), Expect = 7e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || | ||| || ||||| || || |||| ||||||||| ||| || | |||||| Sbjct 2002 AGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCT 2061 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| || ||||| | ||||||||||| || |||||||| ||| Sbjct 2062 TCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTATCC 2121 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || |||||| ||| ||| || | || ||||| || || || ||||| Sbjct 2122 TGGATCTTTGCCTTAACGTTCTCAATGGAGTCTGATGGCTCGACTTCCAA 2171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178846120649799