Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq29 109 6e-19 seq108 104 3e-17 seq773 91.5 2e-13 >seq29 Length=258594 Score = 109 bits (120), Expect = 6e-19 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||||||| ||||| || | || || | ||||| |||||||| Sbjct 96614 CTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAA 96555 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||||||||| | || | || || |||||| |||||| ||||| | Sbjct 96554 GATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATT 96495 Query 46522 CGCCACCGTGTCGCTCGAT---TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| || || || | || |||||||| ||||||| ||||| Sbjct 96494 TTCGATAGTGTC---CGATGGCTCAACCTCGAGGGTAATGGTTTTACCCGTCAATGTTTT 96438 Query 46579 AACAAAGATTTGCAT 46593 || ||||||||||| Sbjct 96437 GACGAAGATTTGCAT 96423 >seq108 Length=162490 Score = 104 bits (114), Expect = 3e-17 Identities = 143/199 (72%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || ||||||||| | ||||| |||| || ||||||||||| ||||| Sbjct 111872 CTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAA 111931 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| |||||||| || | || | || |||||||| |||||| ||||| | Sbjct 111932 GATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 111991 Query 46522 CGCCACCGTGTCGCTCGAT---TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| || || || | |||||||| ||||| || || ||||| Sbjct 111992 TTCAATTGTGTC---CGATGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTT 112048 Query 46579 AACAAAGATTTGCATTTTG 46597 || ||||||||||| ||| Sbjct 112049 CACGAAGATTTGCATCTTG 112067 >seq773 Length=33153 Score = 91.5 bits (100), Expect = 2e-13 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419 ||| || ||||| | | ||| | |||| |||||||| || |||||||| ||||| Sbjct 124 TTAATTTCCTCCACGGAGACGAAGAACCAAGTGCAATGTCGATTCTTTTTGGATGTTGTA 65 Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 |||| || ||||| |||| ||||||||||| || ||||| ||||| ||||||||||| Sbjct 64 GTCGCTTAAGGTGCGACCGTCTTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGGTC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565203093796440