Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq29 109 6e-19
seq108 104 3e-17
seq773 91.5 2e-13
>seq29
Length=258594
Score = 109 bits (120), Expect = 6e-19
Identities = 142/195 (73%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||||||||| ||||||||| ||||| || | || || | ||||| ||||||||
Sbjct 96614 CTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAA 96555
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||| ||||||||||| | || | || || |||||| |||||| ||||| |
Sbjct 96554 GATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATT 96495
Query 46522 CGCCACCGTGTCGCTCGAT---TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | ||||| |||| || || || | || |||||||| ||||||| |||||
Sbjct 96494 TTCGATAGTGTC---CGATGGCTCAACCTCGAGGGTAATGGTTTTACCCGTCAATGTTTT 96438
Query 46579 AACAAAGATTTGCAT 46593
|| |||||||||||
Sbjct 96437 GACGAAGATTTGCAT 96423
>seq108
Length=162490
Score = 104 bits (114), Expect = 3e-17
Identities = 143/199 (72%), Gaps = 6/199 (3%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || ||||||||| | ||||| |||| || ||||||||||| |||||
Sbjct 111872 CTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAA 111931
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||| || | || | || |||||||| |||||| ||||| |
Sbjct 111932 GATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 111991
Query 46522 CGCCACCGTGTCGCTCGAT---TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578
| | ||||| |||| || || || | |||||||| ||||| || || |||||
Sbjct 111992 TTCAATTGTGTC---CGATGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTT 112048
Query 46579 AACAAAGATTTGCATTTTG 46597
|| ||||||||||| |||
Sbjct 112049 CACGAAGATTTGCATCTTG 112067
>seq773
Length=33153
Score = 91.5 bits (100), Expect = 2e-13
Identities = 92/120 (77%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||| || ||||| | | ||| | |||| |||||||| || |||||||| |||||
Sbjct 124 TTAATTTCCTCCACGGAGACGAAGAACCAAGTGCAATGTCGATTCTTTTTGGATGTTGTA 65
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
|||| || ||||| |||| ||||||||||| || ||||| ||||| |||||||||||
Sbjct 64 GTCGCTTAAGGTGCGACCGTCTTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGGTC 5
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565203093796440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |