Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq596 351 1e-91
seq108 134 1e-26
seq29 125 7e-24
seq1975 91.5 1e-13
>seq596
Length=46163
Score = 351 bits (388), Expect = 1e-91
Identities = 587/842 (70%), Gaps = 10/842 (1%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
|||||| || | ||||| ||||| ||||| || ||||| || ||||| || ||||||||
Sbjct 2475 CATCACACCGGACTTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTC 2534
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710
| || || ||| || ||||| || || |||||| ||| | | |
Sbjct 2535 GAGCGAGATCGATTCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTT--TCCAACT 2592
Query 132711 C--AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAA 132768
| || ||| || || | |||||||||||||||||||||| ||||| | ||||
Sbjct 2593 CCAAGCTCGGACAGAAGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAG 2652
Query 132769 TTAAGTCCCAGCA-GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGAC 132827
|| | || |||| | ||||| || || || ||||| ||||| ||| || || ||
Sbjct 2653 TTCATGCCGAGCATGTCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTAC 2711
Query 132828 CGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAA 132887
|| || | || ||| || ||||||| || ||| || | | ||| ||||
Sbjct 2712 AGCCTCTGAGATGATCTCGATAACGCGTTCCTTTGGTGGCTTCTGTTCAAGATGTCTGAA 2771
Query 132888 CATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA 132947
||||| |||||||||||| || |||||||||||||| | || ||||||||||| |||
Sbjct 2772 CATCAGGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAA 2831
Query 132948 AGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGA 133007
|| | || ||||| | ||||| || |||||||| || || | ||| || || ||
Sbjct 2832 GGTGAGACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCT 2891
Query 133008 AAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTT 133067
||||| | || ||||| || || || || | | ||| || || || | || | | |
Sbjct 2892 GAAGAAAATTCCTTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGT 2951
Query 133068 GCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGAT 133127
||||||||||||| || ||||| || ||||||| || || ||||| | | ||||
Sbjct 2952 GCTGGCGATCCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGAC 3011
Query 133128 GGCGTTCAACAAACGGAGTTTCTCTTCC--GAGGAACGCACGTAGGTGTCGATGAGGGTC 133185
|||||| || || | ||| | || | ||| | | |||||| || ||||| |
Sbjct 3012 GGCGTTGAA--AAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGC 3069
Query 133186 GAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCC 133245
|| ||||| || ||||| || || ||||||||||| || ||||| || ||||| || |||
Sbjct 3070 GAGTACATCTCGGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCC 3129
Query 133246 TCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCG 133305
|| || |||||||| || ||| || || || || || ||||| ||||||||||||
Sbjct 3130 TCTGTGACTTGCACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCG 3189
Query 133306 CTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC 133365
|| ||||| |||||||| || || ||| ||||| |||||| |||| ||||||
Sbjct 3190 GAAGCTGCGAAGAAGGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCTTCAAGTTG 3249
Query 133366 TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCG 133425
| ||||||| | ||||||| |||| || || || || || |||||||| || || ||
Sbjct 3250 TTCCAGTCGTTCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCA 3309
Query 133426 GC 133427
||
Sbjct 3310 GC 3311
>seq108
Length=162490
Score = 134 bits (148), Expect = 1e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| |||||||| ||||| ||||| ||||| ||||| ||||||||| |||| |||||| |
Sbjct 112066 AAGATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCA 112007
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
| |||| | ||| | || | || |||| ||||| || || ||||| | ||
Sbjct 112006 TCGGACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGAT 111947
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| ||||| ||||| || |||| ||||| | | |||||||
Sbjct 111946 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGCGACTAC 111887
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||| || ||||| |||| || || ||||| || |||
Sbjct 111886 AACATTCAGAAGGAGTCGACACTTCACTTGGTTCTCCGT 111848
>seq29
Length=258594
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| ||||| | ||||| |||||||| ||| |||| || ||| | |
Sbjct 96423 ATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGAGCCATCG 96482
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | ||| | || | || |||| |||||||| || |||||| | |||||
Sbjct 96483 GACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCAG 96542
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| || || || |||| || | || || || | ||||||||||
Sbjct 96543 CAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGCGACTACAAC 96602
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||||||| |||| || || ||||| || ||| || | || ||
Sbjct 96603 ATCCAAAAGGAGTCGACACTTCACTTGGTCCTCCGTCTGCGTGGTGG 96649
>seq1975
Length=2172
Score = 91.5 bits (100), Expect = 1e-13
Identities = 108/145 (74%), Gaps = 1/145 (1%)
Strand=Plus/Minus
Query 38315 AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCAT 38374
|||| |||| | ||| |||| || || || ||||| ||| | ||||| ||||| | ||
Sbjct 2141 AACG-TTAAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCAGACCAGCAGCGATTGAT 2083
Query 38375 TTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434
| || || || ||||| || || | |||||| | | ||||||||||||||| || ||
Sbjct 2082 CTTTGCTGGAAAGCAGCTCGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAAGA 2023
Query 38435 AGCGACGCTGCATTTGGTGCTGCGT 38459
| |||| ||||| ||||| || |||
Sbjct 2022 ATCGACACTGCACTTGGTTCTTCGT 1998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500141557956480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |