Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq596 351 1e-91 seq108 134 1e-26 seq29 125 7e-24 seq1975 91.5 1e-13 >seq596 Length=46163 Score = 351 bits (388), Expect = 1e-91 Identities = 587/842 (70%), Gaps = 10/842 (1%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 |||||| || | ||||| ||||| ||||| || ||||| || ||||| || |||||||| Sbjct 2475 CATCACACCGGACTTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTC 2534 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 | || || ||| || ||||| || || |||||| ||| | | | Sbjct 2535 GAGCGAGATCGATTCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTT--TCCAACT 2592 Query 132711 C--AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAA 132768 | || ||| || || | |||||||||||||||||||||| ||||| | |||| Sbjct 2593 CCAAGCTCGGACAGAAGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAG 2652 Query 132769 TTAAGTCCCAGCA-GACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGAC 132827 || | || |||| | ||||| || || || ||||| ||||| ||| || || || Sbjct 2653 TTCATGCCGAGCATGTCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTAC 2711 Query 132828 CGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAA 132887 || || | || ||| || ||||||| || ||| || | | ||| |||| Sbjct 2712 AGCCTCTGAGATGATCTCGATAACGCGTTCCTTTGGTGGCTTCTGTTCAAGATGTCTGAA 2771 Query 132888 CATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAA 132947 ||||| |||||||||||| || |||||||||||||| | || ||||||||||| ||| Sbjct 2772 CATCAGGCAAGCAAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAA 2831 Query 132948 AGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGA 133007 || | || ||||| | ||||| || |||||||| || || | ||| || || || Sbjct 2832 GGTGAGACCTGGCATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCT 2891 Query 133008 AAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTT 133067 ||||| | || ||||| || || || || | | ||| || || || | || | | | Sbjct 2892 GAAGAAAATTCCTTCGACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGT 2951 Query 133068 GCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGAT 133127 ||||||||||||| || ||||| || ||||||| || || ||||| | | |||| Sbjct 2952 GCTGGCGATCCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGAC 3011 Query 133128 GGCGTTCAACAAACGGAGTTTCTCTTCC--GAGGAACGCACGTAGGTGTCGATGAGGGTC 133185 |||||| || || | ||| | || | ||| | | |||||| || ||||| | Sbjct 3012 GGCGTTGAA--AAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGC 3069 Query 133186 GAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCC 133245 || ||||| || ||||| || || ||||||||||| || ||||| || ||||| || ||| Sbjct 3070 GAGTACATCTCGGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCC 3129 Query 133246 TCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCG 133305 || || |||||||| || ||| || || || || || ||||| |||||||||||| Sbjct 3130 TCTGTGACTTGCACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCG 3189 Query 133306 CTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC 133365 || ||||| |||||||| || || ||| ||||| |||||| |||| |||||| Sbjct 3190 GAAGCTGCGAAGAAGGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCTTCAAGTTG 3249 Query 133366 TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCG 133425 | ||||||| | ||||||| |||| || || || || || |||||||| || || || Sbjct 3250 TTCCAGTCGTTCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCA 3309 Query 133426 GC 133427 || Sbjct 3310 GC 3311 >seq108 Length=162490 Score = 134 bits (148), Expect = 1e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || |||||||| ||||| ||||| ||||| ||||| ||||||||| |||| |||||| | Sbjct 112066 AAGATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCA 112007 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | ||| | || | || |||| ||||| || || ||||| | || Sbjct 112006 TCGGACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGAT 111947 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| ||||| || |||| ||||| | | ||||||| Sbjct 111946 CAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGCGACTAC 111887 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || ||||| |||| || || ||||| || ||| Sbjct 111886 AACATTCAGAAGGAGTCGACACTTCACTTGGTTCTCCGT 111848 >seq29 Length=258594 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| ||||| | ||||| |||||||| ||| |||| || ||| | | Sbjct 96423 ATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGAGCCATCG 96482 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | || |||| |||||||| || |||||| | ||||| Sbjct 96483 GACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCAG 96542 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | ||| || || || |||| || | || || || | |||||||||| Sbjct 96543 CAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGCGACTACAAC 96602 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| |||| || || ||||| || ||| || | || || Sbjct 96603 ATCCAAAAGGAGTCGACACTTCACTTGGTCCTCCGTCTGCGTGGTGG 96649 >seq1975 Length=2172 Score = 91.5 bits (100), Expect = 1e-13 Identities = 108/145 (74%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 38315 AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCAT 38374 |||| |||| | ||| |||| || || || ||||| ||| | ||||| ||||| | || Sbjct 2141 AACG-TTAAGGCAAAGATCCAGGATAAGGAAGGAATCCCCCCAGACCAGCAGCGATTGAT 2083 Query 38375 TTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 | || || || ||||| || || | |||||| | | ||||||||||||||| || || Sbjct 2082 CTTTGCTGGAAAGCAGCTCGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAAGA 2023 Query 38435 AGCGACGCTGCATTTGGTGCTGCGT 38459 | |||| ||||| ||||| || ||| Sbjct 2022 ATCGACACTGCACTTGGTTCTTCGT 1998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500141557956480