Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq108 102 3e-16 seq29 102 3e-16 seq244 100 1e-15 seq1147 84.2 9e-11 >seq108 Length=162490 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| ||||| || || || || || || || || || || || |||| Sbjct 112063 ATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGCCATCG 112004 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | || || || ||||| |||||||| |||||||| ||||| Sbjct 112003 GACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGATCAG 111944 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||| | || ||| | || || || |||||||| || | || ||| || || || Sbjct 111943 CAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCGCACATTGAGCGACTACAAC 111884 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | ||||| | ||||||||||| || Sbjct 111883 ATTCAGAAGGAGTCGACACTTCACTTGGT 111855 >seq29 Length=258594 Score = 102 bits (112), Expect = 3e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| |||||| |||| |||||||| ||||| || || ||||| |||| Sbjct 96423 ATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGAGCCATCG 96482 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | | || || || || || || ||||| ||||| || || || Sbjct 96483 GACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCAG 96542 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || || ||| | || || ||| | ||||||||| | ||| || || || || Sbjct 96543 CAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGCGACTACAAC 96602 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | ||||||||||| || Sbjct 96603 ATCCAAAAGGAGTCGACACTTCACTTGGT 96631 >seq244 Length=102324 Score = 100 bits (110), Expect = 1e-15 Identities = 241/362 (67%), Gaps = 6/362 (2%) Strand=Plus/Plus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| ||||||||||| | |||||||| |||||||| ||||| || || |||| Sbjct 50432 CTCCAGAAGAAATTTCCGCCATGGTTCTCGGAAAAATGAAGGAAACCGCTGAGGCATATT 50491 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || || || | || || | |||||||| || || |||||||| || || | Sbjct 50492 TGGGCAAGAAGGTCACCCACGCTGTCGTCACTGTTCCAGCCTACTTCAATGACGCCCAGC 50551 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||| || || ||||| ||| || | || | || || | || || || || | Sbjct 50552 GTCAAGCTACCAAGGATGCCGGAGTCATCTCAGGCCTCAACGTCATGCGTATCATCAACG 50611 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 |||| || || || ||| | || |||||| | ||| || || || | |||||| | Sbjct 50612 AACCAACTGCCGCCGCTATCGCCTATGGA-TTGGACAA--GAAGGA---CGGAGAAAAGA 50665 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 | || | || || ||| |||| || || || ||| ||| | || | || || Sbjct 50666 ACGTTCTCGTCTTCGATCTTGGCGGTGGTACCTTCGATGTCTCTCTGCTCACTATCGATA 50725 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601 | || || || || || ||||||| ||||| || ||| | |||||||||||| | | Sbjct 50726 ACGGAGTCTTCGAGGTCGTCTCAACCAACGGTGACACCCATTTGGGAGGTGAAGATTTCG 50785 Query 451602 AT 451603 || Sbjct 50786 AT 50787 >seq1147 Length=13600 Score = 84.2 bits (92), Expect = 9e-11 Identities = 228/347 (66%), Gaps = 3/347 (1%) Strand=Plus/Plus Query 451259 TCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACT 451318 || |||||||| || || ||||| || || || || || | || |||| || Sbjct 7306 TCGATGGTTCTCACCAAGATGAAGGAGACCGCCGAGGCCTACTTGGGAAAGACAGTCACC 7365 Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 | || || || || || |||||||||||||| ||| | || || ||||| || || || Sbjct 7366 AACGCTGTCATCACAGTCCCCGCTTATTTCAACGATTCTCAGCGCCAAGCCACAAAGGAC 7425 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 |||| || || || || || || | || || || || || || || |||||||| Sbjct 7426 TCAGGCACCATCGCAGGCTTGAACGTCTTGCGTATCATCAACGAGCCGACCGCAGCTGCC 7485 Query 451439 CTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGAT 451498 | || || || | ||| || |||| | | ||| || | ||| | || ||| Sbjct 7486 ATCGCTTACGG-TTTGGACAA--GAAAGCCGCTGGAGAGCGCAACGTCTTAATTTTCGAT 7542 Query 451499 TTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTA 451558 || || || || || ||| ||| | | || || || ||||| | || ||||| Sbjct 7543 TTGGGCGGTGGTACCTTCGATGTCTCTATCTTGTCTATCGATGATGGAATTTTCGAAGTC 7602 Query 451559 AAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| |||| ||||| |||||| | |||||||||||| | || || Sbjct 7603 AAGTCAACTGCCGGTGACACTCATTTGGGAGGTGAAGATTTCGACAA 7649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975591906481676