Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq426 104 3e-17 seq1280 86.0 8e-12 seq596 86.0 8e-12 >seq426 Length=67415 Score = 104 bits (114), Expect = 3e-17 Identities = 262/396 (66%), Gaps = 17/396 (4%) Strand=Plus/Minus Query 176702 GGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCG 176761 |||||| || ||| || | |||| | || || ||||| ||||||||||| | ||| Sbjct 24372 GGCCAGTTGTTGTGGATGAAGTTGATTAGCAGGCCTTTGATATGGGAACCGTCTTGATCC 24313 Query 176762 GCATCCGTCATGATCATGAGACGACCATACCGAAGC---------TCGGAAACATCTTGA 176812 ||| ||||||||||| || || || || ||| |||| | || Sbjct 24312 TGATCAGTCATGATCATCAGTTTTCCGTAGCGGAGCGTTTGCAAGTCGGCGGTAGTGAGA 24253 Query 176813 TAGTCCTTACCCTGT--TGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTG 176870 || | ||| | ||| || | ||||||||||| |||||| ||||| || |||| Sbjct 24252 TACTTCTT--CTTGTACTGCAACCCCAAGATCTTGATGAGATTGTTGATTTCAGCGTTTT 24195 Query 176871 ATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGA 176930 || |||| || | ||| |||||||| || | ||| ||||| | ||||| | Sbjct 24194 CCAAGATCTGTTTGTGCGTGGCTTCACGAACGTTGAGAAGCTTACCACGCAATGGGAACA 24135 Query 176931 CACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAAT 176990 | ||||||||||| || || || || ||| |||| ||| || | | || || || | Sbjct 24134 CTCCGTAGTGATCACGTCCGACAACTCCGAGTCCCGAAACAGCCAAAGACTTGGCTGAGT 24075 Query 176991 CACCCTCTGTCACGATGAGTGTACACTT--GCCAGATTGTGCCGTACCCGCCTTGTTCGC 177048 | ||||| || | ||| | |||||| || | || | || ||||| || | ||| || Sbjct 24074 CTCCCTCGGTAAGGATCAATGTACAATTCATCGAGTTCTTG--GTACCGGCGTCGTTGGC 24017 Query 177049 ATCATCCAATTTGGGAATACCAGTAATTTTGGACTT 177084 || |||||||| ||||| || | | |||||||| Sbjct 24016 GTCTTCCAATTTTGGAATGCCCTTCAACTTGGACTT 23981 >seq1280 Length=9399 Score = 86.0 bits (94), Expect = 8e-12 Identities = 602/956 (63%), Gaps = 33/956 (3%) Strand=Plus/Plus Query 111611 CCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGT 111670 ||| || ||||| ||||| | || || | || |||||||| ||||| || || || | Sbjct 1506 CCCGCAACACATGCTCATGAGAGTTGCCGTGGGCATCCATGGTGAAGACATCGACTCGGC 1565 Query 111671 TTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || |||| | |||| ||| || | ||||| ||||| Sbjct 1566 CATTGAGACTTACAACCTTTTGTCTGAACGCTACTTCACCCATGCCTCGCCAACTCTCTT 1625 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTG-CAAACAAGGAGG 111789 | ||| | ||| || | || || | || |||||| || ||| | | || | Sbjct 1626 CGCCGCCGCTACGCCTCGCCCGCAGCTTTCGTCGTGTTTC-TTGTTGTCGATGTCCGATG 1684 Query 111790 ATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTG 111849 | ||||| | |||||||||| || || | |||| || ||| |||| ||||| Sbjct 1685 ACTCAATTGACGGCATTTACGATACGCTGAAACAATGCGCTTTGATCAGCAAGTCGGCTG 1744 Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTAC 111907 | |||||||| | || | || | | | ||||| | ||||| | | || || Sbjct 1745 GCGGTATCGGTGTCAACGTGCACTGTATTCGCGCCAAG--GGAACGTATATCGCCGGCAC 1802 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || || ||| | || || |||||||| | || || | ||| ||| || ||||| Sbjct 1803 CAACGGGATCTCAAACGGACTTGTTCCAATGTTGCGTGTTTACAACAACACCGCTCGCTA 1862 Query 111968 TGTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATG 112021 |||| |||||| || ||| | || | | || ||||| | ||||| ||||| || Sbjct 1863 TGTAGACCAAGGCGGAAACAAGCGAC-CAGGTG--CTTTCGCAATTTATCTCGAGCCGTG 1919 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAA------GGTGATGAGGA 112075 ||||| || || | |||||||| || |||||| || || | || || Sbjct 1920 GCACGGCGACGTCTTCGAGTTCCTCGA------TCTCAAGAAAAACACTGGCAAAGAAGA 1973 Query 112076 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 112134 | || ||| || || | |||| |||| | |||||||| ||| | |||||| | | Sbjct 1974 AGTTCG-TGCTCGTGACATGTTCTACGCTTTGTGGATTCCCGATTTGTTCATGCGTCGCG 2032 Query 112135 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATG 112194 |||| | || ||||| | | ||||| ||| || || |||| ||| Sbjct 2033 TTGAAAGCAACGGAGTCTGGTCGTTGATGTGTCCGCACAGCTGTCCAGGCCTCTACGACT 2092 Query 112195 CCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTG 112254 | ||| || ||||| || | ||| | ||||| | ||| | || || Sbjct 2093 CGTGGGGCGAAGAGTTCGAGAAGTTGTACGAGAGATACGAAGCCGAAGGCCGTTAC-CTC 2151 Query 112255 CGACGGTGCCAG-CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGT 112313 || | | | || || || ||||| || || || |||| ||| ||||||||| Sbjct 2152 CGCCAGATCAAGGCTCAAGACTTGTGGTTTGCCATCATCGAGTCACAAGTCGAGACTGGC 2211 Query 112314 ACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGT 112373 || || || ||| | ||||| ||||| || |||| |||| || || |||| | || Sbjct 2212 ACGCCTTACATGTTGTACAAGGACGCTTGCAACCGAAAGTCGAACCAGCAGAACGTCGGC 2271 Query 112374 GTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT-TTACAGACAAAGATGAGAC 112432 || | |||||| | || || |||||| | || | || ||| ||| || || Sbjct 2272 ACCATTCGTTGCTCCAACTTGTGCACGGAAATCATCGAGTATTCCAG-CAAGGACGAAGT 2330 Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC 112492 || || || || || ||||| |||||| || || || |||| | || | ||||| Sbjct 2331 CGCCGTCTGCAATCTGGCATCGATCGCTGTCAACATGTTTGTGAACGCATCAGCCAAGAC 2390 Query 112493 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACA 112548 | || | |||| ||| | ||||| || || ||||||||||| ||| | |||| Sbjct 2391 TTACGACTTCCAAAAGCTCAAGGAAGTCACCAAGACTGTCACAAAGAACTTGAACA 2446 >seq596 Length=46163 Score = 86.0 bits (94), Expect = 8e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 102190 TCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGC 102249 |||| ||||| ||| || || || |||||| || ||| | | || | |||| Sbjct 2923 TCGCCTTTGCTGCTGTCGAAGGAATTTTCTTCAGCGGAAGCTTTGCCTCAATCTTCTGGC 2864 Query 102250 TCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACG 102309 |||||||||| ||| | |||||||||||| |||||| ||||| || ||||| ||||||| Sbjct 2863 TCAAGAAGCGCGGTTTGATGCCAGGTCTCACCTTCTCAAACGAACTCATCTCACGTGACG 2804 Query 102310 AGGGACTCCACCAAGAGTTTGC 102331 |||| | ||| || ||||| Sbjct 2803 AGGGCTTGCACTGTGACTTTGC 2782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620703626877840