Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1280 111 2e-19 seq596 91.5 2e-13 >seq1280 Length=9399 Score = 111 bits (122), Expect = 2e-19 Identities = 242/360 (67%), Gaps = 2/360 (1%) Strand=Plus/Minus Query 110104 TCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCA 110163 || || || || |||| |||| ||| || |||||||| |||||| || || ||| Sbjct 2540 TCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGATGACGCATGTTCGATCGCTTAGCC 2481 Query 110164 GTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTC 110223 | | ||||| ||||| ||||||| | || | ||||| || |||||||| Sbjct 2480 TCTGGGATCGGGTAGTAGTTGACATCGATGATCTTGTTCAAGTTCTTTGTGACAGTCTTG 2421 Query 110224 GTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGG 110282 |||| ||| | ||| || | | | ||| | || || | || | || ||| | || Sbjct 2420 GTGACTTCCTTGAGCTTTTGGAAGTCGTAAGTCTTGG-CTGATGCGTTCACAAACATGTT 2362 Query 110283 GAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAAT 110342 || ||| || || || |||||||| || | ||||| ||| || || || | || Sbjct 2361 GACAGCGATCGATGCCAGATTGCAGACGGCGACTTCGTCCTTGCTGGAATACTCGATGAT 2302 Query 110343 TTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTT 110402 |||||| ||||||||||| | |||| || | ||||| ||| ||||| || ||| Sbjct 2301 TTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTT 2242 Query 110403 GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGC 110462 ||| || ||||| || | |||||| || || ||||| || ||||||| || ||||| Sbjct 2241 GCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATGGC 2182 >seq596 Length=46163 Score = 91.5 bits (100), Expect = 2e-13 Identities = 287/434 (66%), Gaps = 8/434 (2%) Strand=Plus/Plus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 || || ||||| |||| ||||||||||||||||| || ||||| ||||| |||||| Sbjct 2494 TATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGATTCCATG 2553 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGATTGGTGGTTGACCAACTTGTTTCAGAAGACGA 119327 ||| || |||||||||| || |||| | |||| | |||||||||| Sbjct 2554 AAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGAAGACGA 2613 Query 119328 TCGGAGACATACTCGATATATTCGGACATCTTTTCCG-AATTCATACCTATGAGATTACA 119386 |||| || ||||||| ||||| ||||| | |||| | ||||| || | | | || Sbjct 2614 TCGGCCACGAACTCGATGTATTCAGACAT-TAGTCCGCAGTTCATGCCGAGCATGTCGCA 2672 Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTT-CTCGATCTCCACAGCTTCTTTCACGATGGAGT 119445 ||| || || ||| | ||| |||| || |||| ||||| ||| | ||| | Sbjct 2673 CGGAAGGGCGTCG-GTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGATCTCGA 2731 Query 119446 GAATAGTTTCTGTCGATGGTTTGTTTCTCAAGA-GTTTAAACAACTCTACGGCAAATTCT 119504 || ||| | | ||| || | | |||||| || | |||| | ||||| || Sbjct 2732 TAACGCGTTCCTTTGGTGGCTTCTGT-TCAAGATGTCTGAACATCAGGCAAGCAAAGTCA 2790 Query 119505 TGATG-AAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAG 119563 || |||||| || || || |||||||| || || |||| || || ||||| | Sbjct 2791 CAGTGCAAGCCC-TCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGGCATCAA 2849 Query 119564 TCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCAC 119623 || | ||||| ||||| ||||| | ||| ||||| ||||| || || || || Sbjct 2850 ACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCCTTCGAC 2909 Query 119624 ACAGGCGAAAGCGA 119637 | || || |||| Sbjct 2910 AGCAGCAAAGGCGA 2923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588939211086600