Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 111 2e-19
seq596 91.5 2e-13
>seq1280
Length=9399
Score = 111 bits (122), Expect = 2e-19
Identities = 242/360 (67%), Gaps = 2/360 (1%)
Strand=Plus/Minus
Query 110104 TCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCA 110163
|| || || || |||| |||| ||| || |||||||| |||||| || || |||
Sbjct 2540 TCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGATGACGCATGTTCGATCGCTTAGCC 2481
Query 110164 GTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTC 110223
| | ||||| ||||| ||||||| | || | ||||| || ||||||||
Sbjct 2480 TCTGGGATCGGGTAGTAGTTGACATCGATGATCTTGTTCAAGTTCTTTGTGACAGTCTTG 2421
Query 110224 GTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTA-TTGACATATTTGGG 110282
|||| ||| | ||| || | | | ||| | || || | || | || ||| | ||
Sbjct 2420 GTGACTTCCTTGAGCTTTTGGAAGTCGTAAGTCTTGG-CTGATGCGTTCACAAACATGTT 2362
Query 110283 GAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAAT 110342
|| ||| || || || |||||||| || | ||||| ||| || || || | ||
Sbjct 2361 GACAGCGATCGATGCCAGATTGCAGACGGCGACTTCGTCCTTGCTGGAATACTCGATGAT 2302
Query 110343 TTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTT 110402
|||||| ||||||||||| | |||| || | ||||| ||| ||||| || |||
Sbjct 2301 TTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTT 2242
Query 110403 GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGC 110462
||| || ||||| || | |||||| || || ||||| || ||||||| || |||||
Sbjct 2241 GCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATGGC 2182
>seq596
Length=46163
Score = 91.5 bits (100), Expect = 2e-13
Identities = 287/434 (66%), Gaps = 8/434 (2%)
Strand=Plus/Plus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
|| || ||||| |||| ||||||||||||||||| || ||||| ||||| ||||||
Sbjct 2494 TATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGATTCCATG 2553
Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGATTGGTGGTTGACCAACTTGTTTCAGAAGACGA 119327
||| || |||||||||| || |||| | |||| | ||||||||||
Sbjct 2554 AAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGAAGACGA 2613
Query 119328 TCGGAGACATACTCGATATATTCGGACATCTTTTCCG-AATTCATACCTATGAGATTACA 119386
|||| || ||||||| ||||| ||||| | |||| | ||||| || | | | ||
Sbjct 2614 TCGGCCACGAACTCGATGTATTCAGACAT-TAGTCCGCAGTTCATGCCGAGCATGTCGCA 2672
Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTT-CTCGATCTCCACAGCTTCTTTCACGATGGAGT 119445
||| || || ||| | ||| |||| || |||| ||||| ||| | ||| |
Sbjct 2673 CGGAAGGGCGTCG-GTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGATCTCGA 2731
Query 119446 GAATAGTTTCTGTCGATGGTTTGTTTCTCAAGA-GTTTAAACAACTCTACGGCAAATTCT 119504
|| ||| | | ||| || | | |||||| || | |||| | ||||| ||
Sbjct 2732 TAACGCGTTCCTTTGGTGGCTTCTGT-TCAAGATGTCTGAACATCAGGCAAGCAAAGTCA 2790
Query 119505 TGATG-AAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAG 119563
|| |||||| || || || |||||||| || || |||| || || ||||| |
Sbjct 2791 CAGTGCAAGCCC-TCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGGCATCAA 2849
Query 119564 TCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCAC 119623
|| | ||||| ||||| ||||| | ||| ||||| ||||| || || || ||
Sbjct 2850 ACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCCTTCGAC 2909
Query 119624 ACAGGCGAAAGCGA 119637
| || || ||||
Sbjct 2910 AGCAGCAAAGGCGA 2923
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588939211086600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |