Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 105 8e-18
seq2433 98.7 1e-15
>seq1280
Length=9399
Score = 105 bits (116), Expect = 8e-18
Identities = 551/864 (64%), Gaps = 29/864 (3%)
Strand=Plus/Minus
Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522
||||| ||||||| |||||| || || || ||||| | ||||| | |||||
Sbjct 2357 GCGATCGATGCCAGATTGCAGACGGCGACTTCGTCCTTGCTGGAATACTCGATGATTTCC 2298
Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582
|| ||||||||||| | ||| || || | |||| ||||| |||| ||||||
Sbjct 2297 GTGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAA 2238
Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642
|| |||||||| | |||||| ||||| || ||||| ||||||| || || || |
Sbjct 2237 GCGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAAC 2178
Query 106643 CACACATC-GGCGGCTGGTACAATGGCGTTGG-CCCGTCCCTCCGCCTCGTACTTTGTGT 106700
|||| || | | || | | ||||| || || || || || ||||| | ||
Sbjct 2177 CACAAGTCTTGAGCCTTGATC--TGGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGT 2120
Query 106701 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 106760
| | || ||||| || ||| || |||| |||| ||||| ||| ||||| |
Sbjct 2119 ACAACTTCTCGAACTCTTCGCCCCACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACA 2060
Query 106761 AAAGAGACCATTGACCACCCTCC--TCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 106818
| ||||| ||| | | | ||||| || |||||| | || ||||||||||
Sbjct 2059 TCAACGACCA--GACTCCGTTGCTTTCAACGCGACGCATGAACAAATCGGGAATCCACAA 2002
Query 106819 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACC-TTGGTTGAGTCGTAACTCAA 106877
| | || | || | | ||| | ||||| | || || || | | | || |
Sbjct 2001 AGCGTAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTG-AGATCGA 1943
Query 106878 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGAC 106937
||||||| | || || ||||||| ||||| ||||| | ||||| || || | | |
Sbjct 1942 GGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACC---TGGTC 1886
Query 106938 GC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAA 106991
|| || |||| | ||||||||| || ||| ||| | || || | ||||||||
Sbjct 1885 GCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAA 1826
Query 106992 TAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATC 107049
|| || | ||| || || || || ||| |||| | | ||||| | | |
Sbjct 1825 CAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGATATAC--GTTCCCTTGGCGCGAATACA 1768
Query 107050 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 107109
|| | || | || ||||| |||||| |||| ||| || || | | || ||
Sbjct 1767 GTGCACGTTGACACCGATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGCGT 1708
Query 107110 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC---AT 107166
| || || |||| |||||||| || | ||| || ||| ||| ||| |
Sbjct 1707 ATCGTAAATGCCGTCAATTGAGTCATC--GGACATCGACAA-CAAGAAACACGACGAAAG 1651
Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 107226
|||||| | || ||| | || |||||| ||||| | || || |||| | ||
Sbjct 1650 CTGCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAAGTAGCGTTC 1591
Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286
|||| || ||| ||||| | | | || || |||||||| || |||||||| | |||
Sbjct 1590 AGACAAAAGGTTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACCATGGATGCCCACGGC 1531
Query 107287 CACACGCATAAACATGTATTGGGG 107310
|| | ||| | ||||| ||| ||
Sbjct 1530 AACTCTCATGAGCATGTGTTGCGG 1507
>seq2433
Length=1189
Score = 98.7 bits (108), Expect = 1e-15
Identities = 233/346 (67%), Gaps = 16/346 (5%)
Strand=Plus/Plus
Query 6904 TCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGG 6963
|||| ||||| || |||||||| ||| || ||||| ||| |||| |||||||||
Sbjct 225 TCTACCAAGCGTCGACCTCAGAGCTGTACGGAAAGGTCGCTGAGACACCTCAAAACGAGA 284
Query 6964 AGACACCCTTCTACCCACGCTCGGTCTACGGAGTCT----CAAAGGT-TGCGGCACATTG 7018
| || || ||||| ||||| |||| || | || |||| | | ||| | ||
Sbjct 285 AAACTCCTTTCTATCCACG----GTCTCCGTATGCTTGCGCAAAACTCTACGGTT-ACTG 339
Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078
| |||||| || ||| | || | |||| ||| |||||| ||||| || |||||
Sbjct 340 GATCGTCATCAACTACAGGGAAGCGTACGACATGTACGCGTGCAATGGAATTCTGTTCAA 399
Query 7079 CCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTACC--GAGGGTATC 7136
||| || ||||||||||| || | | ||||| || | ||| || ||| | || |
Sbjct 400 CCACGAGTCACCGAGACGTGGCGAGAATTTTGTTACTAGGAAAATCACCAGAACAGTCGC 459
Query 7137 AAACAAATC-ATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAG 7195
|| | || ||||| || |||| | | || ||||| ||||| || | | |
Sbjct 460 GAAAATCTCGCTGAAG---CAACAGGAAGTACTGGAGTTGGGCAACATCGACTCTAAACG 516
Query 7196 AGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATG 7241
|||||||| ||||||| ||||| || || || |||||| | |||
Sbjct 517 TGATTGGGGGCACGCGAGAGACTACGTCGAGGCGATGTGGATGATG 562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589943948324280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |