Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1280 105 8e-18 seq2433 98.7 1e-15 >seq1280 Length=9399 Score = 105 bits (116), Expect = 8e-18 Identities = 551/864 (64%), Gaps = 29/864 (3%) Strand=Plus/Minus Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 ||||| ||||||| |||||| || || || ||||| | ||||| | ||||| Sbjct 2357 GCGATCGATGCCAGATTGCAGACGGCGACTTCGTCCTTGCTGGAATACTCGATGATTTCC 2298 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || ||||||||||| | ||| || || | |||| ||||| |||| |||||| Sbjct 2297 GTGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAA 2238 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 || |||||||| | |||||| ||||| || ||||| ||||||| || || || | Sbjct 2237 GCGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAAC 2178 Query 106643 CACACATC-GGCGGCTGGTACAATGGCGTTGG-CCCGTCCCTCCGCCTCGTACTTTGTGT 106700 |||| || | | || | | ||||| || || || || || ||||| | || Sbjct 2177 CACAAGTCTTGAGCCTTGATC--TGGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGT 2120 Query 106701 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 106760 | | || ||||| || ||| || |||| |||| ||||| ||| ||||| | Sbjct 2119 ACAACTTCTCGAACTCTTCGCCCCACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACA 2060 Query 106761 AAAGAGACCATTGACCACCCTCC--TCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 106818 | ||||| ||| | | | ||||| || |||||| | || |||||||||| Sbjct 2059 TCAACGACCA--GACTCCGTTGCTTTCAACGCGACGCATGAACAAATCGGGAATCCACAA 2002 Query 106819 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACC-TTGGTTGAGTCGTAACTCAA 106877 | | || | || | | ||| | ||||| | || || || | | | || | Sbjct 2001 AGCGTAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTG-AGATCGA 1943 Query 106878 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGAC 106937 ||||||| | || || ||||||| ||||| ||||| | ||||| || || | | | Sbjct 1942 GGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACC---TGGTC 1886 Query 106938 GC------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAA 106991 || || |||| | ||||||||| || ||| ||| | || || | |||||||| Sbjct 1885 GCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAA 1826 Query 106992 TAATACCATCTGATTGACCATTTGT-CCCCCGA-ATACGAGATTTATTGGCTCTCACATC 107049 || || | ||| || || || || ||| |||| | | ||||| | | | Sbjct 1825 CAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGATATAC--GTTCCCTTGGCGCGAATACA 1768 Query 107050 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 107109 || | || | || ||||| |||||| |||| ||| || || | | || || Sbjct 1767 GTGCACGTTGACACCGATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGCGT 1708 Query 107110 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC---AT 107166 | || || |||| |||||||| || | ||| || ||| ||| ||| | Sbjct 1707 ATCGTAAATGCCGTCAATTGAGTCATC--GGACATCGACAA-CAAGAAACACGACGAAAG 1651 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 107226 |||||| | || ||| | || |||||| ||||| | || || |||| | || Sbjct 1650 CTGCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAAGTAGCGTTC 1591 Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 |||| || ||| ||||| | | | || || |||||||| || |||||||| | ||| Sbjct 1590 AGACAAAAGGTTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACCATGGATGCCCACGGC 1531 Query 107287 CACACGCATAAACATGTATTGGGG 107310 || | ||| | ||||| ||| || Sbjct 1530 AACTCTCATGAGCATGTGTTGCGG 1507 >seq2433 Length=1189 Score = 98.7 bits (108), Expect = 1e-15 Identities = 233/346 (67%), Gaps = 16/346 (5%) Strand=Plus/Plus Query 6904 TCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAACGAGG 6963 |||| ||||| || |||||||| ||| || ||||| ||| |||| ||||||||| Sbjct 225 TCTACCAAGCGTCGACCTCAGAGCTGTACGGAAAGGTCGCTGAGACACCTCAAAACGAGA 284 Query 6964 AGACACCCTTCTACCCACGCTCGGTCTACGGAGTCT----CAAAGGT-TGCGGCACATTG 7018 | || || ||||| ||||| |||| || | || |||| | | ||| | || Sbjct 285 AAACTCCTTTCTATCCACG----GTCTCCGTATGCTTGCGCAAAACTCTACGGTT-ACTG 339 Query 7019 GCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAA 7078 | |||||| || ||| | || | |||| ||| |||||| ||||| || ||||| Sbjct 340 GATCGTCATCAACTACAGGGAAGCGTACGACATGTACGCGTGCAATGGAATTCTGTTCAA 399 Query 7079 CCATGAATCACCGAGACGAGGTGCAGACTTTGTCACAAAGAAGATTACC--GAGGGTATC 7136 ||| || ||||||||||| || | | ||||| || | ||| || ||| | || | Sbjct 400 CCACGAGTCACCGAGACGTGGCGAGAATTTTGTTACTAGGAAAATCACCAGAACAGTCGC 459 Query 7137 AAACAAATC-ATGAAGGGTGAAAAGGAGTTCATTGAATTGGGTAACATAAACGCGGAGAG 7195 || | || ||||| || |||| | | || ||||| ||||| || | | | Sbjct 460 GAAAATCTCGCTGAAG---CAACAGGAAGTACTGGAGTTGGGCAACATCGACTCTAAACG 516 Query 7196 AGATTGGGGTCACGCGAAGGACTATGTTGAAGCCATGTGGCTCATG 7241 |||||||| ||||||| ||||| || || || |||||| | ||| Sbjct 517 TGATTGGGGGCACGCGAGAGACTACGTCGAGGCGATGTGGATGATG 562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589943948324280