Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq29 152 1e-31
seq108 145 2e-29
seq1975 109 1e-18
>seq29
Length=258594
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || ||||| ||||| || ||||| ||| ||||| | |||||||| | ||
Sbjct 96626 GTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCTTCCAATTG 96567
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| | ||| || |||||||| ||||||||||||||||| || || ||
Sbjct 96566 CTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTT 96507
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|||||| || || || |||||||| || || || ||||||| || || || ||
Sbjct 96506 GGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTTTTACCCGT 96447
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| ||||| ||||| | ||||||
Sbjct 96446 CAATGTTTTGACGAAGATTTGCAT 96423
>seq108
Length=162490
Score = 145 bits (160), Expect = 2e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | |||||| || ||||| || ||||| ||||| ||| | || | || |||||
Sbjct 111854 AACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTC 111913
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| || |||||||| || || || || ||||||||||||||||| ||||||||
Sbjct 111914 AAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTG 111973
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| || |||||| || ||||| |||||||| || || || ||||| | |||||
Sbjct 111974 GATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTCTT 112033
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||||| ||||| | ||||||
Sbjct 112034 GCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063
>seq1975
Length=2172
Score = 109 bits (120), Expect = 1e-18
Identities = 118/154 (77%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTT 194989
||| | ||| || || || ||||| || || ||||| ||| |||| || | |||||||
Sbjct 2004 AACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGCTCAAG-GTGCGACCATCTT 2062
Query 194990 CGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTT 195049
|||||||||| || || ||||| | ||| || |||||||| || || ||||| || || |
Sbjct 2063 CGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTATCCT 2122
Query 195050 GAATTTTTTGCTTGACGTTCTCAATGGTGTCCGA 195083
| || ||| ||| ||||||||||||| ||| ||
Sbjct 2123 GGATCTTTGCCTTAACGTTCTCAATGGAGTCTGA 2156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109410566480699
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |