Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq108 82.4 5e-11 >seq108 Length=162490 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCAT 34830 ||||||||||| ||| || ||||||||||| ||||| | || | | || | || | Sbjct 111854 AACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATG-TGCGACCGTCTT 111912 Query 34831 CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGC 34890 | ||||| || || || || || || || ||||| ||| | || | || |||||||| Sbjct 111913 CAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTT 111972 Query 34891 TAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| ||||| | | || | || | ||| || |||| ||| ||||| | Sbjct 111973 GGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTCT 112032 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 | || ||||| || ||||| ||||| ||||| || Sbjct 112033 TGCCGGTGAGGGTTTTCACGAAGATTTGCATCTT 112066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324613829509416