Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq244 104 2e-16 seq444 96.9 3e-14 >seq244 Length=102324 Score = 104 bits (114), Expect = 2e-16 Identities = 160/225 (71%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 550315 ATTTTCAC--CAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGT 550372 |||||||| ||||| ||||||| | |||||| | |||||||| |||| || Sbjct 50425 ATTTTCACTCCAGAAGAAATTTCCGCCATGGTTCTCGGAAAAATGAAGGAAACCGCTGAG 50484 Query 550373 GCTTTTGTTGGTCAAGAAGTT-ACGGATGCAGTAATAACTGTACCAGCATATTTTAATGA 550431 || | | |||| ||||||| | || | || || | ||||| ||||| || || ||||| Sbjct 50485 GCATAT-TTGGGCAAGAAGGTCACCCACGCTGTCGTCACTGTTCCAGCCTACTTCAATGA 50543 Query 550432 CTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTAT 550491 | | || ||||||||||| || ||||| ||| || | || || || || | ||||| Sbjct 50544 CGCCCAGCGTCAAGCTACCAAGGATGCCGGAGTCATCTCAGGCCTCAACGTCATGCGTAT 50603 Query 550492 TATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAA 550536 ||||| ||||| ||||| || || | || |||||| | || || Sbjct 50604 CATCAACGAACCAACTGCCGCCGCTATCGCCTATGGATTGGACAA 50648 >seq444 Length=64694 Score = 96.9 bits (106), Expect = 3e-14 Identities = 147/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 549974 ATAATGTCAAACAAAGT---AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTT 550030 || ||| ||||||| | ||| || || || ||| | || || || || || || Sbjct 62932 ATCATGGCAAACAAGGCTGCAGCCATCGGCATTGATCTCGGTACGACTTACTCCTGCGTC 62991 Query 550031 GGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACT 550090 | ||||| || || || ||||||||||| || ||||| ||||| ||| | || ||| Sbjct 62992 GCTGTTTTCCAGAACGGAAAAGTTGAAATCATCGCCAACGATCAGGGTTTTCGTACAACT 63051 Query 550091 CCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAA 550150 ||||||||||| |||||||||| ||||| | | ||||| ||| | || ||| | || Sbjct 63052 CCATCTTATGTGGCTTTCACGGATACTGAGCGACTCGTTGGAGATTCCGCCAAAAACCAG 63111 Query 550151 GCCACTGGTAATCCTACCAATACTATTTT 550179 || | ||| || || || |||||||| Sbjct 63112 GCTCCAATTAACCCGACAAACACTATTTT 63140 Score = 91.5 bits (100), Expect = 1e-12 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 549974 ATAATGTCAAACAAAGT---AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTT 550030 || ||| ||||||| | ||| || | || ||| | || || || || || || Sbjct 61235 ATCATGGCAAACAAGGCTGCAGCCATCGACATTGATCTCGGTACGACTTACTCCTGCGTC 61294 Query 550031 GGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACT 550090 | ||||| || || || ||||||||||| || ||||| ||||| ||| | || ||| Sbjct 61295 GCTGTTTTCCAGAACGGAAAAGTTGAAATCATCGCCAACGATCAGGGTTTTCGTACAACT 61354 Query 550091 CCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAA 550150 |||||||| ||| |||||||||| ||||| | | ||||| ||| | || ||| | || Sbjct 61355 CCATCTTACGTTGCTTTCACGGACACTGAGCGACTCGTTGGAGATTCCGCCAAAAACCAG 61414 Query 550151 GCCACTGGTAATCCTACCAATACTATTTT 550179 || | ||| || || || |||||||| Sbjct 61415 GCACCAATTAACCCGACAAACACTATTTT 61443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029031736103530