Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq596 208 1e-48 >seq596 Length=46163 Score = 208 bits (230), Expect = 1e-48 Identities = 542/822 (66%), Gaps = 11/822 (1%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || |||||| | ||||| ||||| || ||||| ||||| | |||||| ||| Sbjct 2491 TGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGATTCC 2550 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGG 47959 |||||| |||||| || || || || | | | | || | || ||| || Sbjct 2551 ATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGAAGA 2610 Query 47960 TGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA- 48018 |||| || ||| |||||||||||| ||||| || | ||||||||| | | | Sbjct 2611 CGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATGTCG 2670 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 ||||| | || | || |||||||| | || |||| || || || | |||| Sbjct 2671 CACGGA-AGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGATCTC 2729 Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAA 48138 ||||||| || || || || | || || || | | || ||| ||||| Sbjct 2730 GATAACGCGTTCCTTTGGTGGCTTCTGTTCAAGATGTCTGA---ACATCAGGCAAGCAAA 2786 Query 48139 GTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCAT 48198 ||| | ||||||||| ||||| || |||||| |||| |||||| |||||| ||||| Sbjct 2787 GTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGGCAT 2846 Query 48199 GACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTC 48258 | || | || ||||||||||| |||| || || || |||||| || || || Sbjct 2847 CAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCCTTC 2906 Query 48259 CACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGA 48318 || || || || ||| | | | ||||| || ||| || || | ||||||| Sbjct 2907 GACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCAGTC 2966 Query 48319 AAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTT 48378 | |||||||| ||||| ||||| | || || | |||| | ||| ||| || Sbjct 2967 CAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAGGAA 3026 Query 48379 CTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAGA 48435 | || ||| || ||| || ||||| | |||| ||| | ||||||||| || Sbjct 3027 GTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGC---GAGTACATCTCGGA 3083 Query 48436 GTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCAC 48495 ||| ||||| || || ||||||||||| || |||||| | |||||| || ||||| Sbjct 3084 GTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCAC 3143 Query 48496 TTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAA 48555 ||| | ||| | || | || ||||| || || || || || ||||| || ||||| Sbjct 3144 TTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAGAA 3203 Query 48556 GGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTAC 48615 ||| || ||||| | ||||| |||||| ||| | | |||||| | | | Sbjct 3204 GGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCTTCAAGTTGTTCCAGTCGTTCAT 3263 Query 48616 GTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657 ||| || || || ||||||||||| ||||| || || || Sbjct 3264 GTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGC 3305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931474614132480