Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq596 208 1e-48
>seq596
Length=46163
Score = 208 bits (230), Expect = 1e-48
Identities = 542/822 (66%), Gaps = 11/822 (1%)
Strand=Plus/Plus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
||||| || |||||| | ||||| ||||| || ||||| ||||| | |||||| |||
Sbjct 2491 TGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGATTCC 2550
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAGG 47959
|||||| |||||| || || || || | | | | || | || ||| ||
Sbjct 2551 ATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGAAGA 2610
Query 47960 TGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA- 48018
|||| || ||| |||||||||||| ||||| || | ||||||||| | | |
Sbjct 2611 CGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATGTCG 2670
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078
||||| | || | || |||||||| | || |||| || || || | ||||
Sbjct 2671 CACGGA-AGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGATCTC 2729
Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAA 48138
||||||| || || || || | || || || | | || ||| |||||
Sbjct 2730 GATAACGCGTTCCTTTGGTGGCTTCTGTTCAAGATGTCTGA---ACATCAGGCAAGCAAA 2786
Query 48139 GTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCAT 48198
||| | ||||||||| ||||| || |||||| |||| |||||| |||||| |||||
Sbjct 2787 GTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGGCAT 2846
Query 48199 GACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTC 48258
| || | || ||||||||||| |||| || || || |||||| || || ||
Sbjct 2847 CAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCCTTC 2906
Query 48259 CACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGA 48318
|| || || || ||| | | | ||||| || ||| || || | |||||||
Sbjct 2907 GACAGCAGCAAAGGCGATAATGCGTTCTCCAAAGTTAGCCTTTGTGCTGGCGATCCAGTC 2966
Query 48319 AAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTT 48378
| |||||||| ||||| ||||| | || || | |||| | ||| ||| ||
Sbjct 2967 CAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAGGAA 3026
Query 48379 CTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACATCTCAGA 48435
| || ||| || ||| || ||||| | |||| ||| | ||||||||| ||
Sbjct 3027 GTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGC---GAGTACATCTCGGA 3083
Query 48436 GTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCAC 48495
||| ||||| || || ||||||||||| || |||||| | |||||| || |||||
Sbjct 3084 GTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGCAC 3143
Query 48496 TTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAA 48555
||| | ||| | || | || ||||| || || || || || ||||| || |||||
Sbjct 3144 TTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAGAA 3203
Query 48556 GGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTAC 48615
||| || ||||| | ||||| |||||| ||| | | |||||| | | |
Sbjct 3204 GGCCAGAACATGGGAGATAAAATGACGCTCGGTGTCCTTCAAGTTGTTCCAGTCGTTCAT 3263
Query 48616 GTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGC 48657
||| || || || ||||||||||| ||||| || || ||
Sbjct 3264 GTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGC 3305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931474614132480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |