Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq596 190 4e-43
>seq596
Length=46163
Score = 190 bits (210), Expect = 4e-43
Identities = 531/815 (65%), Gaps = 13/815 (2%)
Strand=Plus/Minus
Query 25513 TGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACG-CTCTATCCAA 25571
||||| | ||||| | ||| || | ||||||||| ||| |||| || || | |
Sbjct 3296 TGGACAGTGGAAGAAGTCGATTTGTCAAAGGACATGAACGACTGGAACAACTTGAAGGAC 3237
Query 25572 AGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGT 25631
| ||||| |||||| || | || |||| ||||| ||||| || || || || ||
Sbjct 3236 AC-CGAGCGTCATTTTATCTCCCATGTTCTGGCCTTCTTCGCAGCTTCCGACGGCATCGT 3178
Query 25632 GAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTT 25691
|||||||| || || | |||| | ||||||||| | |||||| || ||
Sbjct 3177 TAACGAGAACCTCGTTGAACGGTTCAGCCAGGAAGTGCAAGTCACAGAGGCCCGTTGCTT 3118
Query 25692 CTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT 25751
||| || |||||||| ||||| |||||||| ||||| ||| |||| | |||||| ||
Sbjct 3117 CTATGGCTTCCAGATCGCCATGGAAAATGTCCACTCCGAGATGTACTC---GCTTCTCAT 3061
Query 25752 G---ACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACAT 25808
|| ||||||| |||| ||| | || || || ||| ||||| | |
Sbjct 3060 TGAAACCTACATTAGAGACTCAAAGGAGCGCGACTTCCTTTTCAACGCCGTCGAGAATCT 3001
Query 25809 ACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGC-CAGAGCGCTA 25867
||| | | |||| ||||| |||||| || | |||||| |||| || || ||||
Sbjct 3000 ACCGTGTGTAAAGAAAAAGGCTGACTGGGCCTTGGACTGGATCGCCAGCACAAAG-GCTA 2942
Query 25868 CGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGT 25927
||||| || || | | |||||||||||||| || || || || |||||||| |
Sbjct 2941 ACTTTGGAGAACGCATTATCGCCTTTGCTGCTGTCGAAGGAATTTTCTTCAGCGGAAGCT 2882
Query 25928 TTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACG 25987
|||| | ||||||||||||||| || || ||||| || || ||| || ||||
Sbjct 2881 TTGCCTCAATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTCACCTTCTCAAACG 2822
Query 25988 AGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCC 26047
| |||||| | |||||||| | ||| | || ||||| |||||| | | || | |
Sbjct 2821 AACTCATCTCACGTGACGAGGGCTTGCACTGTGACTTTGCTTGCCTGATGTTCA--GACA 2764
Query 26048 ACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGA 26107
|||| || || || | | || ||| | |||||| ||||||||| |||
Sbjct 2763 TCTTG-AACAGAAGCCACCAAAGGAACGCGTTATCGAGATCATCTCAGAGGCTGTAAAGA 2705
Query 26108 TCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGAC 26167
| || | ||||||| | ||||||||| | |||
Sbjct 2704 TTGAACAAGAGTTTCTGACCGACGCCCTTCCGTGCGACATGCTCGGCATGAACTGCGGAC 2645
Query 26168 TCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCA 26227
| ||| ||||||| |||| |||||||| | ||| |||| | |||| ||| | | |
Sbjct 2644 TAATGTCTGAATACATCGAGTTCGTGGCCGATCGTCTTCTGTCCGAGCTTGGAGTTGGAA 2585
Query 26228 GACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGA 26287
|||||| ||| || || ||| ||| |||||| || ||| | || || ||||
Sbjct 2584 AGATCTACAATACCAAAAATCCCTTCTCCTTCATGGAATCGATCTCGCTCGAGGGAAAGA 2525
Query 26288 CCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
| || ||||| || |||| || || || || |||
Sbjct 2524 CGAATTTCTTCGAGAAGAAAGTGGGAGAATACCAA 2490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928786782031680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |