Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq444 125 5e-23 seq244 116 2e-20 seq108 107 1e-17 seq1147 102 5e-16 seq1110 93.3 3e-13 >seq444 Length=64694 Score = 125 bits (138), Expect = 5e-23 Identities = 181/249 (73%), Gaps = 10/249 (4%) Strand=Plus/Plus Query 474674 TCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAA-GTAA 474731 |||||||| | |||| |||||| | ||||| ||| || | |||| | ||| || | Sbjct 61664 TCAATGGTCCTCACCAAGATGAAAGAGACCGCCGAG-TCTT-TCTTAAAACAGACCGTCA 61721 Query 474732 CTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAG 474791 | || || || || |||||||||||||| |||| |||| |||||||||| |||| Sbjct 61722 CCAGCGCTGTGATCACAGTTCCAGCATATTTCGATGACCATCAATGTCAAGCAACCAAAG 61781 Query 474792 ATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCG 474851 |||| || | || || || ||||| || || || ||||| ||||| || |||||||| | Sbjct 61782 ATGCCGGCACCATCGCTGGCCTTAACGTGTTGCGCATTATCAATGAGCCGACAGCAGCAG 61841 Query 474852 CACTTGCTTATGGTCTTGATAAGAATTCTGACAAAGAAGT---AAATGTTTTAATCTTTG 474908 | |||| |||||| | || || || || ||||||||| ||| || || ||||||| Sbjct 61842 CCATTGCGTATGGTTTGGAGAATAAATC---CAAAGAAGTGAGAAAGGTCTTGATCTTTG 61898 Query 474909 ATTGTGGAG 474917 | | |||| Sbjct 61899 ACTTGGGAG 61907 >seq244 Length=102324 Score = 116 bits (128), Expect = 2e-20 Identities = 167/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 474652 ATTTTCAC--CGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAG 474708 |||||||| | ||| ||||||| | |||||| | | |||||||| ||||||| ||| Sbjct 50425 ATTTTCACTCCAGAAGAAATTTCCGCCATGGTTCTCGGAAAAATGAAGGAAACCGCTGAG 50484 Query 474709 CTCATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATG 474767 ||||| |||| ||||||| | || | || || | ||||||||||| || || |||| Sbjct 50485 G-CATAT-TTGGGCAAGAAGGTCACCCACGCTGTCGTCACTGTTCCAGCCTACTTCAATG 50542 Query 474768 ATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTA 474827 | | || |||||||| || || ||||| ||| || |||| || || || | |||| Sbjct 50543 ACGCCCAGCGTCAAGCTACCAAGGATGCCGGAGTCATCTCAGGCCTCAACGTCATGCGTA 50602 Query 474828 TTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 | || || |||||||| || ||||| | || ||||| | || ||||| Sbjct 50603 TCATCAACGAACCAACTGCCGCCGCTATCGCCTATGGATTGGACAAGAA 50651 >seq108 Length=162490 Score = 107 bits (118), Expect = 1e-17 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 |||||||| ||||| ||||| || || ||||| || ||||| |||||||| ||||||||| Sbjct 111909 TCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTG 111968 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 ||||| ||||| |||||| |||||| || || | || | | || ||||| || Sbjct 111969 TCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGA-CCTCGAGGGTGAT 112027 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || |||||||| || || ||||| ||||| Sbjct 112028 GGTCTTGCCGGTGAGGGTTTTCACGAAGATTTG 112060 >seq1147 Length=13600 Score = 102 bits (112), Expect = 5e-16 Identities = 246/367 (67%), Gaps = 4/367 (1%) Strand=Plus/Plus Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 ||| | ||||| || | ||||||||||| || ||||| || | ||||||| ||||| Sbjct 7144 ATTATAGATGCGAAGCGCTTGATTGGTCGCAAATTTGACGACCCAGCTGTCCAGTCTGAC 7203 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATA 474631 ||| || ||||| || |||| || | | | || |||||| | || | | || Sbjct 7204 ATGAAGCACTGGCCATTCGAGGTCATCAGCGCCGAGGGCAAACCAAAGATCCAGGTTATC 7263 Query 474632 CACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAA 474691 || | ||||| || | || | || || || | || |||||| | |||| Sbjct 7264 TACAAGGATGAAAAGAAGAACTTCTTCCCCGAGGAAGTCAGCTCGATGGTTCTCACCAAG 7323 Query 474692 ATGAAACAAACCG-CGAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTACTG 474749 ||||| | |||| |||| | || ||||| |||| ||| || | || || || || | Sbjct 7324 ATGAAGGAGACCGCCGAG-GCCTA-CTTGGGAAAGACAGTCACCAACGCTGTCATCACAG 7381 Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809 | || || ||||| || |||||||| || ||||| || || || | || | || |||| Sbjct 7382 TCCCCGCTTATTTCAACGATTCTCAGCGCCAAGCCACAAAGGACTCAGGCACCATCGCAG 7441 Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869 | | || || || ||||| || || || || || ||||| || | ||||| ||| | | Sbjct 7442 GCTTGAACGTCTTGCGTATCATCAACGAGCCGACCGCAGCTGCCATCGCTTACGGTTTGG 7501 Query 474870 ATAAGAA 474876 | ||||| Sbjct 7502 ACAAGAA 7508 >seq1110 Length=14556 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || || || || || |||||| |||| || || |||| | ||||||||||| || || Sbjct 13240 GCTGTCATCACCGTGCCAGCAAATTTCAACGACGCTCAGAGACAAGCAACTAAGGACGCT 13181 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 | | |||||| || ||| | ||| | || ||||| || ||||||||||| |||||| | Sbjct 13180 GCTAAAATTGCTGGGCTTGAAGTTCTTCGCATTATCAACGAACCAACAGCTGCCGCATTG 13121 Query 474857 GCTTATGGTCTTGA 474870 |||||||| || || Sbjct 13120 GCTTATGGCCTGGA 13107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267964854424556