Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq444 125 5e-23
seq244 116 2e-20
seq108 107 1e-17
seq1147 102 5e-16
seq1110 93.3 3e-13
>seq444
Length=64694
Score = 125 bits (138), Expect = 5e-23
Identities = 181/249 (73%), Gaps = 10/249 (4%)
Strand=Plus/Plus
Query 474674 TCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAA-GTAA 474731
|||||||| | |||| |||||| | ||||| ||| || | |||| | ||| || |
Sbjct 61664 TCAATGGTCCTCACCAAGATGAAAGAGACCGCCGAG-TCTT-TCTTAAAACAGACCGTCA 61721
Query 474732 CTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAG 474791
| || || || || |||||||||||||| |||| |||| |||||||||| ||||
Sbjct 61722 CCAGCGCTGTGATCACAGTTCCAGCATATTTCGATGACCATCAATGTCAAGCAACCAAAG 61781
Query 474792 ATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCG 474851
|||| || | || || || ||||| || || || ||||| ||||| || |||||||| |
Sbjct 61782 ATGCCGGCACCATCGCTGGCCTTAACGTGTTGCGCATTATCAATGAGCCGACAGCAGCAG 61841
Query 474852 CACTTGCTTATGGTCTTGATAAGAATTCTGACAAAGAAGT---AAATGTTTTAATCTTTG 474908
| |||| |||||| | || || || || ||||||||| ||| || || |||||||
Sbjct 61842 CCATTGCGTATGGTTTGGAGAATAAATC---CAAAGAAGTGAGAAAGGTCTTGATCTTTG 61898
Query 474909 ATTGTGGAG 474917
| | ||||
Sbjct 61899 ACTTGGGAG 61907
>seq244
Length=102324
Score = 116 bits (128), Expect = 2e-20
Identities = 167/229 (73%), Gaps = 6/229 (3%)
Strand=Plus/Plus
Query 474652 ATTTTCAC--CGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAG 474708
|||||||| | ||| ||||||| | |||||| | | |||||||| ||||||| |||
Sbjct 50425 ATTTTCACTCCAGAAGAAATTTCCGCCATGGTTCTCGGAAAAATGAAGGAAACCGCTGAG 50484
Query 474709 CTCATATCTTGGACAAGAAG-TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATG 474767
||||| |||| ||||||| | || | || || | ||||||||||| || || ||||
Sbjct 50485 G-CATAT-TTGGGCAAGAAGGTCACCCACGCTGTCGTCACTGTTCCAGCCTACTTCAATG 50542
Query 474768 ATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTA 474827
| | || |||||||| || || ||||| ||| || |||| || || || | ||||
Sbjct 50543 ACGCCCAGCGTCAAGCTACCAAGGATGCCGGAGTCATCTCAGGCCTCAACGTCATGCGTA 50602
Query 474828 TTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876
| || || |||||||| || ||||| | || ||||| | || |||||
Sbjct 50603 TCATCAACGAACCAACTGCCGCCGCTATCGCCTATGGATTGGACAAGAA 50651
>seq108
Length=162490
Score = 107 bits (118), Expect = 1e-17
Identities = 117/153 (76%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
|||||||| ||||| ||||| || || ||||| || ||||| |||||||| |||||||||
Sbjct 111909 TCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTG 111968
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736
||||| ||||| |||||| |||||| || || | || | | || ||||| ||
Sbjct 111969 TCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGA-CCTCGAGGGTGAT 112027
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || |||||||| || || ||||| |||||
Sbjct 112028 GGTCTTGCCGGTGAGGGTTTTCACGAAGATTTG 112060
>seq1147
Length=13600
Score = 102 bits (112), Expect = 5e-16
Identities = 246/367 (67%), Gaps = 4/367 (1%)
Strand=Plus/Plus
Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571
||| | ||||| || | ||||||||||| || ||||| || | ||||||| |||||
Sbjct 7144 ATTATAGATGCGAAGCGCTTGATTGGTCGCAAATTTGACGACCCAGCTGTCCAGTCTGAC 7203
Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATA 474631
||| || ||||| || |||| || | | | || |||||| | || | | ||
Sbjct 7204 ATGAAGCACTGGCCATTCGAGGTCATCAGCGCCGAGGGCAAACCAAAGATCCAGGTTATC 7263
Query 474632 CACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAA 474691
|| | ||||| || | || | || || || | || |||||| | ||||
Sbjct 7264 TACAAGGATGAAAAGAAGAACTTCTTCCCCGAGGAAGTCAGCTCGATGGTTCTCACCAAG 7323
Query 474692 ATGAAACAAACCG-CGAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTACTG 474749
||||| | |||| |||| | || ||||| |||| ||| || | || || || || |
Sbjct 7324 ATGAAGGAGACCGCCGAG-GCCTA-CTTGGGAAAGACAGTCACCAACGCTGTCATCACAG 7381
Query 474750 TTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAG 474809
| || || ||||| || |||||||| || ||||| || || || | || | || ||||
Sbjct 7382 TCCCCGCTTATTTCAACGATTCTCAGCGCCAAGCCACAAAGGACTCAGGCACCATCGCAG 7441
Query 474810 GTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTG 474869
| | || || || ||||| || || || || || ||||| || | ||||| ||| | |
Sbjct 7442 GCTTGAACGTCTTGCGTATCATCAACGAGCCGACCGCAGCTGCCATCGCTTACGGTTTGG 7501
Query 474870 ATAAGAA 474876
| |||||
Sbjct 7502 ACAAGAA 7508
>seq1110
Length=14556
Score = 93.3 bits (102), Expect = 3e-13
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796
|| || || || || |||||| |||| || || |||| | ||||||||||| || ||
Sbjct 13240 GCTGTCATCACCGTGCCAGCAAATTTCAACGACGCTCAGAGACAAGCAACTAAGGACGCT 13181
Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856
| | |||||| || ||| | ||| | || ||||| || ||||||||||| |||||| |
Sbjct 13180 GCTAAAATTGCTGGGCTTGAAGTTCTTCGCATTATCAACGAACCAACAGCTGCCGCATTG 13121
Query 474857 GCTTATGGTCTTGA 474870
|||||||| || ||
Sbjct 13120 GCTTATGGCCTGGA 13107
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267964854424556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |