Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1280 84.2 1e-11 >seq1280 Length=9399 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || ||||| |||||||||| || || || | || | || | | ||||||||| Sbjct 2025 CATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGAACTTCTTCTTT 1966 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 || ||| || || || ||||| | ||| || || | || |||||| || || | || Sbjct 1965 GCCAGTGTTT-TTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGAT 1907 Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111 | || || ||| |||| || || ||| ||||| ||||| || | || || | | Sbjct 1906 AAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGT 1847 Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGC 26159 || |||| |||||||||||| | ||| |||| | ||||| |||| Sbjct 1846 TGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGC 1799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253024589626775