Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1280 111 2e-18 seq1947 102 1e-15 seq596 102 1e-15 >seq1280 Length=9399 Score = 111 bits (122), Expect = 2e-18 Identities = 190/273 (70%), Gaps = 2/273 (1%) Strand=Plus/Minus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| || ||||| || |||| ||| | || || | ||| || || || ||||| || Sbjct 1871 TGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAG 1812 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 ||||||||||| || | || | || |||||| | |||| || | ||| Sbjct 1811 ATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTGACACCG 1752 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || ||||| ||||||||| ||| | ||||| ||||| ||||| ||||| ||||| || Sbjct 1751 ATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCA 1692 Query 1630246 ATCGAGTCGGCCTTCAT-GTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||||| | ||| | | || ||||| |||||||| |||||| | | ||| | Sbjct 1691 ATTGAGTCATCGGACATCGACAACAAGAAA-CACGACGAAAGCTGCGGGCGAGGCGTAGC 1633 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAA 1630337 |||| |||||| || |||| || |||||| Sbjct 1632 GGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAA 1600 >seq1947 Length=2277 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| | || || ||||| || ||||| || | || || Sbjct 174 GCTTGGCCAATTCACCGGGCAGCAAGAGACGAACGGCAGTTTGGATTTCTCTGCTGGTGA 233 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| |||| ||| || || | | ||||||| |||| | Sbjct 234 TGGTCGATCGCTTGTTGTAGTGGGCCAAGCGGGAAGCTTCAGCGGCGATGCGCTCGAAGA 293 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| |||||| | || ||||| || |||||||| Sbjct 294 TGTCGTTGACGAAGCTGTTCATGATCGACATGGCTTTCGATGAGATTCCAGTGTCGGGGT 353 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || ||||| | ||||||| ||||| Sbjct 354 GAACTTGCTTCAACACCTTGAAGATG 379 >seq596 Length=46163 Score = 102 bits (112), Expect = 1e-15 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||| || ||||| | |||||| || || ||||| ||||||||||||||| | ||||| Sbjct 2493 GTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGATTCCAT 2552 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | | ||| || || || |||||| |||| | ||| ||| | || || || Sbjct 2553 GAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGAAGACG 2612 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||||| || ||||||||||| | |||| || ||| ||||||||||| | | Sbjct 2613 ATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATGTCGCA 2672 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCT 868934 ||| || | ||| ||| |||||||| || |||| || ||||| |||||||| Sbjct 2673 CGGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGATCT 2728 Score = 96.9 bits (106), Expect = 4e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||||| || || ||||||||||||||||| || ||| | |||||| ||||| Sbjct 3082 GAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGC 3141 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || |||| ||||||| | | ||||||||| |||||||||||| || ||||| Sbjct 3142 ACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAG 3201 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCG 869785 || ||||| || || |||||| || |||||| Sbjct 3202 AAGGCCAGAACATGGGAGATAAAATGACGCTCG 3234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106729122779049