Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 111 2e-18
seq1947 102 1e-15
seq596 102 1e-15
>seq1280
Length=9399
Score = 111 bits (122), Expect = 2e-18
Identities = 190/273 (70%), Gaps = 2/273 (1%)
Strand=Plus/Minus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||| || ||||| || |||| ||| | || || | ||| || || || ||||| ||
Sbjct 1871 TGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAG 1812
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
||||||||||| || | || | || |||||| | |||| || | |||
Sbjct 1811 ATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTGACACCG 1752
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| ||||| ||||||||| ||| | ||||| ||||| ||||| ||||| ||||| ||
Sbjct 1751 ATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCA 1692
Query 1630246 ATCGAGTCGGCCTTCAT-GTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
|| ||||| | ||| | | || ||||| |||||||| |||||| | | ||| |
Sbjct 1691 ATTGAGTCATCGGACATCGACAACAAGAAA-CACGACGAAAGCTGCGGGCGAGGCGTAGC 1633
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAA 1630337
|||| |||||| || |||| || ||||||
Sbjct 1632 GGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAA 1600
>seq1947
Length=2277
Score = 102 bits (112), Expect = 1e-15
Identities = 146/206 (71%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| ||| ||| ||| | || || ||||| || ||||| || | || ||
Sbjct 174 GCTTGGCCAATTCACCGGGCAGCAAGAGACGAACGGCAGTTTGGATTTCTCTGCTGGTGA 233
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || |||||||| |||| |||| ||| || || | | ||||||| |||| |
Sbjct 234 TGGTCGATCGCTTGTTGTAGTGGGCCAAGCGGGAAGCTTCAGCGGCGATGCGCTCGAAGA 293
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||| |||||| | || ||||| || ||||||||
Sbjct 294 TGTCGTTGACGAAGCTGTTCATGATCGACATGGCTTTCGATGAGATTCCAGTGTCGGGGT 353
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| || ||||| | ||||||| |||||
Sbjct 354 GAACTTGCTTCAACACCTTGAAGATG 379
>seq596
Length=46163
Score = 102 bits (112), Expect = 1e-15
Identities = 164/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758
||| || ||||| | |||||| || || ||||| ||||||||||||||| | |||||
Sbjct 2493 GTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGATTCCAT 2552
Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818
| | ||| || || || |||||| |||| | ||| ||| | || || ||
Sbjct 2553 GAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGAAGACG 2612
Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878
||||| || ||||||||||| | |||| || ||| ||||||||||| | |
Sbjct 2613 ATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATGTCGCA 2672
Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCT 868934
||| || | ||| ||| |||||||| || |||| || ||||| ||||||||
Sbjct 2673 CGGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGATCT 2728
Score = 96.9 bits (106), Expect = 4e-14
Identities = 113/153 (74%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
||||||| || || ||||||||||||||||| || ||| | |||||| |||||
Sbjct 3082 GAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTTGC 3141
Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752
|| |||| ||||||| | | ||||||||| |||||||||||| || |||||
Sbjct 3142 ACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGAAG 3201
Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCG 869785
|| ||||| || || |||||| || ||||||
Sbjct 3202 AAGGCCAGAACATGGGAGATAAAATGACGCTCG 3234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106729122779049
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |