Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 260 1e-64
seq108 127 2e-24
seq29 120 3e-22
seq1975 89.7 5e-13
>seq1280
Length=9399
Score = 260 bits (288), Expect = 1e-64
Identities = 975/1502 (65%), Gaps = 50/1502 (3%)
Strand=Plus/Minus
Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213
|| || || || |||| || || | || ||||| || || | || ||| ||||||||
Sbjct 3272 TTGTCGACTGTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCCG 3213
Query 138214 GTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272
|| || || |||||||||| || ||| | ||| || || || ||| |||| | ||
Sbjct 3212 GTCTTCAAGCCCATTTTCC-AGCCGTGGAAGTGAATTGACGTCAGTTTTCCGTAGTTTGG 3154
Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGC 138332
| || | | ||| || || || |||||||||||| || || ||||| ||
Sbjct 3153 CTCGGCGACGTGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGC 3094
Query 138333 CATGTTAAT-TAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391
||| | || | | || ||| ||||||||| ||||||||||| | || || || |
Sbjct 3093 CATCTGGATCTGCGTCTTGACTGA-CATCTCCCAGACGGTCTTGTACAACTCGCGGATGT 3035
Query 138392 -GTCGCGGTATTGTTGCAATATTTTGAA-TGCTCCCGTTGGCCGCAATGATGCGATTTCT 138449
| || || || | | || || |||| || ||| |||| || ||||| || |
Sbjct 3034 CGGCGGGG-ATCTTCTCGATGTTCTGAACTGATCC-GTTGCTAGCGATGATCTCGTTCTT 2977
Query 138450 CATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGAC 138509
|||||| |||| | |||| | | | | || || || |||| || | ||
Sbjct 2976 CATGTCGTCGTCCCAGAGATCTCGTTCGGTGAGATCCTTGATGAGATGGTGATTGACGAT 2917
Query 138510 CTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGA 138569
||||||||| ||| || || || ||| | |||| ||||| | ||||| ||
Sbjct 2916 CTGAAATTCTCCGCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGCT 2857
Query 138570 TTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGA 138629
||||||||| || |||||||| || || | || |||||||| || | | ||| ||
Sbjct 2856 TTCGTTGTTGCCGAGAATCTGTGCAGTCGAAGCAGTCGGCATTGGAGCGAGGAGAAGTGA 2797
Query 138630 ATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGAC-GACCAGTCCCACAAATCGC 138688
||| || | ||||| ||| |||| || ||| | |||||||||||| | |
Sbjct 2796 ATTGCGCACTCCGTGCTCGGCGATCTTAGCCTTCAG-GACAGCCCAGTCCCACAAGTTGG 2738
Query 138689 TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTG-----CC 138743
| ||| | || | |||||| |||||||| || ||||| || || || | ||
Sbjct 2737 TTGGTGTCTTTTCCCACATGTCGTACTGCAAGATTCC-----TTTCGACACCGGCGATCC 2683
Query 138744 TTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACC 138803
|||||| | ||||| ||| | |||| || | || || ||||| ||||| ||
Sbjct 2682 TTCGTAGGTTTCGTAAGTACCGAGCTCTCTGGCGAGTTCACAACTTGCCTCAAGCGCGCC 2623
Query 138804 ATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC-GGCGCTCTCGTACG 138862
||||| || || ||| |||||||| || ||| | || | |||| |||| |||
Sbjct 2622 GTAGTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTTGGCGA-CTCGAACG 2564
Query 138863 GCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGAT 138922
| | | | | |||| ||||||||||| ||||| | ||| | |||| |||||||
Sbjct 2563 GATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGAT 2504
Query 138923 GGCGCAGATTTGA-CGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTG 138981
| |||| || || ||||| || || ||| || || ||||| ||||||||||| |||
Sbjct 2503 GACGCATGTTCGATCGCTTA-GCCTCTGGGATCGGGTAGTAGTTGACATCGATGATCTTG 2445
Query 138982 TTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCC 139041
|| || || ||| ||| || | ||| | || || ||||| ||
Sbjct 2444 TTCAAGTTCTTTGTGACAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAAGT---- 2389
Query 139042 CCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACC 139101
||| | || | ||| ||||| |||||||| ||||| || | ||||| ||
Sbjct 2388 --CTTG--GCTGATG-CGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACG 2334
Query 139102 GCCACTTCGTCGGGGTCGCTG---TATTCGACAATTTCGGCACACAAATTACTACACTTG 139158
|| |||||||| | |||| || |||| ||||| | ||||| || ||
Sbjct 2333 GCGACTTCGTC---CTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGA 2277
Query 139159 ATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATAC 139218
|| || || | || || || || |||||||| ||||| || ||||| | ||| ||
Sbjct 2276 ATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAA 2217
Query 139219 GGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATT 139278
|| |||||||| || ||||||| ||| || ||| ||||||| ||| | ||
Sbjct 2216 GGCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGATC 2157
Query 139279 TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCG 139338
|| || | |||| | | ||| ||||| | ||||| | | ||||| ||| ||
Sbjct 2156 TGGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCCC 2097
Query 139339 TAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCC 139398
| | ||| | || | |||| ||| |||||||| | |||||| || ||||| ||
Sbjct 2096 CACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTT-GCT 2038
Query 139399 TT-GACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTT 139457
|| ||||| | |||||||| ||| ||||||||||||||| | | || || || ||
Sbjct 2037 TTCAACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACG 1978
Query 139458 CTTATCTTCCGAACCCATGTTACGTTTCATG---TTAAGGAAATCAAAAACGTCAGCGTG 139514
||||| || |||| |||| || | ||||| || || ||||| ||||
Sbjct 1977 AACTTCTTCTTTGCCAGTGTT---TTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTG 1921
Query 139515 CCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTG 139571
||| || || ||||| || || | || ||| || ||| || ||||| || || |
Sbjct 1920 CCACGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATA 1861
Query 139572 TCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT 139631
|| | | || ||| | || |||||||| || | || ||| | | | ||||||||
Sbjct 1860 GCGAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGT 1801
Query 139632 GC 139633
||
Sbjct 1800 GC 1799
>seq108
Length=162490
Score = 127 bits (140), Expect = 2e-24
Identities = 160/214 (75%), Gaps = 8/214 (4%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
|||||| ||||| | ||||| || ||||| || || || || ||||| || || ||||
Sbjct 112064 GATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGA-GCCAT 112006
Query 24763 CG-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
|| ||||| | |||| || || |||||||||||||| ||||| || ||||| ||||
Sbjct 112005 CGGACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGATC 111946
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACA-TGTCAGATT 24878
| || ||| ||||||| || || || ||||| || || ||| ||| || || |
Sbjct 111945 AGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCG---CACATTGAGCGACT 111889
Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGT 24912
| |||||||| ||||| |||||||| ||||||||
Sbjct 111888 ACAACATTCAGAAGGAGTCGACACTTCACTTGGT 111855
>seq29
Length=258594
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| | ||||| | || |||||||| ||||| ||||| || || |||| |
Sbjct 96423 ATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGA-GCCATC 96481
Query 24764 G-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
| |||| | |||| || || |||||||| ||||||||||| || || || || ||
Sbjct 96482 GGACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCA 96541
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || |||||||| ||||| || || |||| ||| | | || || || ||
Sbjct 96542 GCAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGCGACTACAA 96601
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| |||||||| |||||||| |||||||| | || |||| || ||
Sbjct 96602 CATCCAAAAGGAGTCGACACTTCACTTGGTCCTCCGTCTGCGTGGTGG 96649
>seq1975
Length=2172
Score = 89.7 bits (98), Expect = 5e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846
||||||||| || || |||||||| || || || || || || ||||||||||| || ||
Sbjct 2130 AAAGATCCAGGATAAGGAAGGAATCCCCCCAGACCAGCAGCGATTGATCTTTGCTGGAAA 2071
Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906
||||| || ||| | | | || || || ||||| || || ||||||||||| ||
Sbjct 2070 GCAGCTCGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAAGAATCGACACTGCA 2011
Query 24907 CTTGGTGTTGCGATTGCGCGGAGG 24930
|||||| | || | || |||||
Sbjct 2010 CTTGGTTCTTCGTCTCCGTGGAGG 1987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449869498271160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |