Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1280 260 1e-64 seq108 127 2e-24 seq29 120 3e-22 seq1975 89.7 5e-13 >seq1280 Length=9399 Score = 260 bits (288), Expect = 1e-64 Identities = 975/1502 (65%), Gaps = 50/1502 (3%) Strand=Plus/Minus Query 138154 TTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCCC 138213 || || || || |||| || || | || ||||| || || | || ||| |||||||| Sbjct 3272 TTGTCGACTGTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCCG 3213 Query 138214 GTTTTTAA-CCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCGG 138272 || || || |||||||||| || ||| | ||| || || || ||| |||| | || Sbjct 3212 GTCTTCAAGCCCATTTTCC-AGCCGTGGAAGTGAATTGACGTCAGTTTTCCGTAGTTTGG 3154 Query 138273 TTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGGC 138332 | || | | ||| || || || |||||||||||| || || ||||| || Sbjct 3153 CTCGGCGACGTGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGC 3094 Query 138333 CATGTTAAT-TAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391 ||| | || | | || ||| ||||||||| ||||||||||| | || || || | Sbjct 3093 CATCTGGATCTGCGTCTTGACTGA-CATCTCCCAGACGGTCTTGTACAACTCGCGGATGT 3035 Query 138392 -GTCGCGGTATTGTTGCAATATTTTGAA-TGCTCCCGTTGGCCGCAATGATGCGATTTCT 138449 | || || || | | || || |||| || ||| |||| || ||||| || | Sbjct 3034 CGGCGGGG-ATCTTCTCGATGTTCTGAACTGATCC-GTTGCTAGCGATGATCTCGTTCTT 2977 Query 138450 CATGTCATCGTTGTACAGATTCAACTTGATCAAGTCGTTTATCAGATATCTGTTTATGAC 138509 |||||| |||| | |||| | | | | || || || |||| || | || Sbjct 2976 CATGTCGTCGTCCCAGAGATCTCGTTCGGTGAGATCCTTGATGAGATGGTGATTGACGAT 2917 Query 138510 CTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGA 138569 ||||||||| ||| || || || ||| | |||| ||||| | ||||| || Sbjct 2916 CTGAAATTCTCCGCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGCT 2857 Query 138570 TTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGA 138629 ||||||||| || |||||||| || || | || |||||||| || | | ||| || Sbjct 2856 TTCGTTGTTGCCGAGAATCTGTGCAGTCGAAGCAGTCGGCATTGGAGCGAGGAGAAGTGA 2797 Query 138630 ATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGAC-GACCAGTCCCACAAATCGC 138688 ||| || | ||||| ||| |||| || ||| | |||||||||||| | | Sbjct 2796 ATTGCGCACTCCGTGCTCGGCGATCTTAGCCTTCAG-GACAGCCCAGTCCCACAAGTTGG 2738 Query 138689 TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTG-----CC 138743 | ||| | || | |||||| |||||||| || ||||| || || || | || Sbjct 2737 TTGGTGTCTTTTCCCACATGTCGTACTGCAAGATTCC-----TTTCGACACCGGCGATCC 2683 Query 138744 TTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACC 138803 |||||| | ||||| ||| | |||| || | || || ||||| ||||| || Sbjct 2682 TTCGTAGGTTTCGTAAGTACCGAGCTCTCTGGCGAGTTCACAACTTGCCTCAAGCGCGCC 2623 Query 138804 ATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTC-GGCGCTCTCGTACG 138862 ||||| || || ||| |||||||| || ||| | || | |||| |||| ||| Sbjct 2622 GTAGTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTTGGCGA-CTCGAACG 2564 Query 138863 GCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGAT 138922 | | | | | |||| ||||||||||| ||||| | ||| | |||| ||||||| Sbjct 2563 GATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGAT 2504 Query 138923 GGCGCAGATTTGA-CGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTG 138981 | |||| || || ||||| || || ||| || || ||||| ||||||||||| ||| Sbjct 2503 GACGCATGTTCGATCGCTTA-GCCTCTGGGATCGGGTAGTAGTTGACATCGATGATCTTG 2445 Query 138982 TTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCC 139041 || || || ||| ||| || | ||| | || || ||||| || Sbjct 2444 TTCAAGTTCTTTGTGACAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAAGT---- 2389 Query 139042 CCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACC 139101 ||| | || | ||| ||||| |||||||| ||||| || | ||||| || Sbjct 2388 --CTTG--GCTGATG-CGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACG 2334 Query 139102 GCCACTTCGTCGGGGTCGCTG---TATTCGACAATTTCGGCACACAAATTACTACACTTG 139158 || |||||||| | |||| || |||| ||||| | ||||| || || Sbjct 2333 GCGACTTCGTC---CTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGA 2277 Query 139159 ATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATAC 139218 || || || | || || || || |||||||| ||||| || ||||| | ||| || Sbjct 2276 ATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAA 2217 Query 139219 GGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATT 139278 || |||||||| || ||||||| ||| || ||| ||||||| ||| | || Sbjct 2216 GGCGTGCCAGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGATC 2157 Query 139279 TGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCG 139338 || || | |||| | | ||| ||||| | ||||| | | ||||| ||| || Sbjct 2156 TGGCGGAGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCCC 2097 Query 139339 TAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCC 139398 | | ||| | || | |||| ||| |||||||| | |||||| || ||||| || Sbjct 2096 CACGAGTCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGTT-GCT 2038 Query 139399 TT-GACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTT 139457 || ||||| | |||||||| ||| ||||||||||||||| | | || || || || Sbjct 2037 TTCAACGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACG 1978 Query 139458 CTTATCTTCCGAACCCATGTTACGTTTCATG---TTAAGGAAATCAAAAACGTCAGCGTG 139514 ||||| || |||| |||| || | ||||| || || ||||| |||| Sbjct 1977 AACTTCTTCTTTGCCAGTGTT---TTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTG 1921 Query 139515 CCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTG 139571 ||| || || ||||| || || | || ||| || ||| || ||||| || || | Sbjct 1920 CCACGGCTCGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATA 1861 Query 139572 TCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGT 139631 || | | || ||| | || |||||||| || | || ||| | | | |||||||| Sbjct 1860 GCGAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGT 1801 Query 139632 GC 139633 || Sbjct 1800 GC 1799 >seq108 Length=162490 Score = 127 bits (140), Expect = 2e-24 Identities = 160/214 (75%), Gaps = 8/214 (4%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| ||||| | ||||| || ||||| || || || || ||||| || || |||| Sbjct 112064 GATGCAAATCTTCGTGAAAACCCTCACCGGCAAGACCATCACCCTCGAGGTCGA-GCCAT 112006 Query 24763 CG-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 || ||||| | |||| || || |||||||||||||| ||||| || ||||| |||| Sbjct 112005 CGGACACAATTGAAAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCTCCAGATC 111946 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACA-TGTCAGATT 24878 | || ||| ||||||| || || || ||||| || || ||| ||| || || | Sbjct 111945 AGCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAAGACGGTCG---CACATTGAGCGACT 111889 Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 | |||||||| ||||| |||||||| |||||||| Sbjct 111888 ACAACATTCAGAAGGAGTCGACACTTCACTTGGT 111855 >seq29 Length=258594 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| | || |||||||| ||||| ||||| || || |||| | Sbjct 96423 ATGCAAATCTTCGTCAAAACATTGACGGGTAAAACCATTACCCTCGAGGTTGA-GCCATC 96481 Query 24764 G-ACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 | |||| | |||| || || |||||||| ||||||||||| || || || || || Sbjct 96482 GGACACTATCGAAAATGTCAAGGCCAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCA 96541 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || || |||||||| ||||| || || |||| ||| | | || || || || Sbjct 96542 GCAGCGATTGATCTTCGCCGGAAAGCAATTGGAAGATGGACGTACTCTGAGCGACTACAA 96601 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| |||||||| |||||||| |||||||| | || |||| || || Sbjct 96602 CATCCAAAAGGAGTCGACACTTCACTTGGTCCTCCGTCTGCGTGGTGG 96649 >seq1975 Length=2172 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 24787 AAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAA 24846 ||||||||| || || |||||||| || || || || || || ||||||||||| || || Sbjct 2130 AAAGATCCAGGATAAGGAAGGAATCCCCCCAGACCAGCAGCGATTGATCTTTGCTGGAAA 2071 Query 24847 ACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA 24906 ||||| || ||| | | | || || || ||||| || || ||||||||||| || Sbjct 2070 GCAGCTCGAAGATGGTCGCACCTTGAGCGACTACAACATCCAGAAAGAATCGACACTGCA 2011 Query 24907 CTTGGTGTTGCGATTGCGCGGAGG 24930 |||||| | || | || ||||| Sbjct 2010 CTTGGTTCTTCGTCTCCGTGGAGG 1987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449869498271160