Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1947 156 7e-32
seq596 125 1e-22
seq1280 120 5e-21
>seq1947
Length=2277
Score = 156 bits (172), Expect = 7e-32
Identities = 178/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||||||||| || || || ||||||||| |||||| ||| ||| |||
Sbjct 135 TGTACTTGGTGACGGCCTTGGTGCCTTCAGACACGGCGTGCTTGGCCAATTCACCGGGCA 194
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589
| || || ||||| || ||||| || | | || ||| || |||||||| |
Sbjct 195 GCAAGAGACGAACGGCAGTTTGGATTTCTCTGCTGGTGATGGTCGATCGCTTGTTGTAGT 254
Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
| |||| |||| || || | | ||||||| |||| ||||||||||| || |||||
Sbjct 255 GGGCCAAGCGGGAAGCTTCAGCGGCGATGCGCTCGAAGATGTCGTTGACGAAGCTGTTCA 314
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708
|||||||||| | ||| ||||| || ||||||||| || ||||| | |||||||
Sbjct 315 TGATCGACATGGCTTTCGATGAGATTCCAGTGTCGGGGTGAACTTGCTTCAACACCTTG 373
>seq596
Length=46163
Score = 125 bits (138), Expect = 1e-22
Identities = 229/332 (69%), Gaps = 15/332 (5%)
Strand=Plus/Plus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| ||||| || ||| | |||||| ||| ||| || ||||| | |||||||||
Sbjct 2800 CCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGGCATCAAACCGCGCTTC 2859
Query 794401 TTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 794457
|||||||| ||||| |||| || || || ||| || || || ||||| || |||
Sbjct 2860 TTGAGCCAGAAGATTGAGGCAAAG---CTTCCGCTGAAGAAAATTCCTTCGACAGCAGCA 2916
Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTG---ATCCACTTCATC 794514
||| ||| | || || |||| | || ||| | || || ||||| | ||
Sbjct 2917 AAGGCGATAATGCGTTCTCCAAAGTT----AG--CCTTTGTGCTGGCGATCCAGTCCAAG 2970
Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCC 794574
||||| || ||||||||| | || | || | | |||| |||| || ||| |||
Sbjct 2971 GCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAGGAAGTCG 3030
Query 794575 TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATG 794634
||| | ||| | | |||||| || ||||| |||||||| |||| |||||||
Sbjct 3031 CGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGAGTGGACA 3090
Query 794635 TTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
||||| |||||||||||||||||||| |||||
Sbjct 3091 TTTTCCATGGCGATCTGGAAGCCATAGAAGCA 3122
>seq1280
Length=9399
Score = 120 bits (132), Expect = 5e-21
Identities = 182/259 (70%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
||||| |||||||| || |||| ||| | || || | ||| || ||||| ||||| ||
Sbjct 1871 TGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAG 1812
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
||||||||||| || | || | ||| |||||| | |||| || | |||
Sbjct 1811 ATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTGACACCG 1752
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| ||||| |||| |||| ||| | ||||| | ||||||||| ||||| ||||| ||
Sbjct 1751 ATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCA 1692
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
|| ||||| | ||| ||||| || |||||||| |||||||| | ||| ||
Sbjct 1691 ATTGAGTCATCGGACATCGACAACAAGAAACACGACGAAAGCTGCGGGCGAGGCGTAGCG 1632
Query 2073781 GCATTGAAGAGCGTGGGCG 2073799
|| |||||| || ||||
Sbjct 1631 GCGGCGAAGAGAGTTGGCG 1613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915714846318683
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |