Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1947 156 7e-32 seq596 125 1e-22 seq1280 120 5e-21 >seq1947 Length=2277 Score = 156 bits (172), Expect = 7e-32 Identities = 178/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| || || || ||||||||| |||||| ||| ||| ||| Sbjct 135 TGTACTTGGTGACGGCCTTGGTGCCTTCAGACACGGCGTGCTTGGCCAATTCACCGGGCA 194 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || ||||| || ||||| || | | || ||| || |||||||| | Sbjct 195 GCAAGAGACGAACGGCAGTTTGGATTTCTCTGCTGGTGATGGTCGATCGCTTGTTGTAGT 254 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| |||| || || | | ||||||| |||| ||||||||||| || ||||| Sbjct 255 GGGCCAAGCGGGAAGCTTCAGCGGCGATGCGCTCGAAGATGTCGTTGACGAAGCTGTTCA 314 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||||||||| | ||| ||||| || ||||||||| || ||||| | ||||||| Sbjct 315 TGATCGACATGGCTTTCGATGAGATTCCAGTGTCGGGGTGAACTTGCTTCAACACCTTG 373 >seq596 Length=46163 Score = 125 bits (138), Expect = 1e-22 Identities = 229/332 (69%), Gaps = 15/332 (5%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||| || ||| | |||||| ||| ||| || ||||| | ||||||||| Sbjct 2800 CCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGGCATCAAACCGCGCTTC 2859 Query 794401 TTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 794457 |||||||| ||||| |||| || || || ||| || || || ||||| || ||| Sbjct 2860 TTGAGCCAGAAGATTGAGGCAAAG---CTTCCGCTGAAGAAAATTCCTTCGACAGCAGCA 2916 Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTG---ATCCACTTCATC 794514 ||| ||| | || || |||| | || ||| | || || ||||| | || Sbjct 2917 AAGGCGATAATGCGTTCTCCAAAGTT----AG--CCTTTGTGCTGGCGATCCAGTCCAAG 2970 Query 794515 GCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCC 794574 ||||| || ||||||||| | || | || | | |||| |||| || ||| ||| Sbjct 2971 GCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGAAAAGGAAGTCG 3030 Query 794575 TTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATG 794634 ||| | ||| | | |||||| || ||||| |||||||| |||| ||||||| Sbjct 3031 CGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCTCGGAGTGGACA 3090 Query 794635 TTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 ||||| |||||||||||||||||||| ||||| Sbjct 3091 TTTTCCATGGCGATCTGGAAGCCATAGAAGCA 3122 >seq1280 Length=9399 Score = 120 bits (132), Expect = 5e-21 Identities = 182/259 (70%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 ||||| |||||||| || |||| ||| | || || | ||| || ||||| ||||| || Sbjct 1871 TGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAG 1812 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 ||||||||||| || | || | ||| |||||| | |||| || | ||| Sbjct 1811 ATCCCGTTGGTGCCGGCGATATACGTTCCCTTGGCGCGAATACAGTGCACGTTGACACCG 1752 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || ||||| |||| |||| ||| | ||||| | ||||||||| ||||| ||||| || Sbjct 1751 ATACCGCCAGCCGACTTGCTGATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCA 1692 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||||| | ||| ||||| || |||||||| |||||||| | ||| || Sbjct 1691 ATTGAGTCATCGGACATCGACAACAAGAAACACGACGAAAGCTGCGGGCGAGGCGTAGCG 1632 Query 2073781 GCATTGAAGAGCGTGGGCG 2073799 || |||||| || |||| Sbjct 1631 GCGGCGAAGAGAGTTGGCG 1613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915714846318683