Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq108 120 6e-22
seq1975 118 2e-21
seq496 109 1e-18
seq1542 87.8 4e-12
>seq108
Length=162490
Score = 120 bits (132), Expect = 6e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| ||||| ||||| || || || || ||||| || || || ||
Sbjct 111835 TACCACCACGAAGACGGAGAACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGC 111894
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | ||||||||| || || || ||||| ||||| || | || ||||||||||
Sbjct 111895 TCAATGTGCGACCGTCTTCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAG 111954
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| ||||| || || ||||||||||| || || || || |
Sbjct 111955 GAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGA 112014
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | || || |||||||| || | || || || || || |||||
Sbjct 112015 CCTCGAGGGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063
>seq1975
Length=2172
Score = 118 bits (130), Expect = 2e-21
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
||||| | | ||| ||||| |||||||| || ||||||||||| || || || ||
Sbjct 1987 CCTCCACGGAGACGAAGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGCTC 2046
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | | ||| ||||| || || |||||||||||||| | || || || ||||| ||
Sbjct 2047 AAGGTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGG 2106
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|||||||||||||| || |||||||| || || || ||||| | || || || |||
Sbjct 2107 ATTCCTTCCTTATCCTGGATCTTTGCCTTAACGTTCTCAATGGAGTCTGATGGCTCGACT 2166
Query 82764 TCCAA 82768
|||||
Sbjct 2167 TCCAA 2171
>seq496
Length=57215
Score = 109 bits (120), Expect = 1e-18
Identities = 184/264 (70%), Gaps = 2/264 (1%)
Strand=Plus/Plus
Query 198342 TGGAATGCATCGCAAATACAGATGATAAGAGAAGGAAAAATGCATAGTTTTTTAAGAATG 198401
|||||||| | |||| ||| || | |||||| |||||||| |||| | |||||
Sbjct 40580 TGGAATGCCGCTCAAAACCAGTTGCGCAAAGAAGGCAAAATGCACGGTTTCCTTCGAATG 40639
Query 198402 TACTGGGCTAAAAAGATACTTGAATGGACAAGAACACCGGAAGACGCTTTGAGTTATAGT 198461
|||||||| || ||||| || || |||| ||| || || || ||| | | |
Sbjct 40640 TACTGGGCCAAGAAGATCCTCGAGTGGATGTCAACGCCAGATGAAGCTCTTGCCACTGCT 40699
Query 198462 ATCTATCTAAACAATAAGTACGAACTAGACGGCACG-GATCCTAACGGATACGTAGGTTG 198520
||||| || ||| || ||| | | ||||| ||| ||||| ||||||||||| || ||
Sbjct 40700 ATCTACCTCAACGATCGCTACAACTTGGACGG-ACGTGATCCAAACGGATACGTCGGATG 40758
Query 198521 TATGTGGTCTATTTGCGGATTACATGATCGAGCGTGGAAAGAAAGACCTATATTTGGGAA 198580
|||||| ||| | ||| | || || | ||||||||| || | |||| || ||
Sbjct 40759 CATGTGGAGCATTGGAGGAATTCACGACATGGGCTGGAAAGAACGAGATGTATTCGGCAA 40818
Query 198581 GATAAGATATATGAATTATGAGGG 198604
||| || |||||||| || || ||
Sbjct 40819 GATCAGGTATATGAACTACGAAGG 40842
>seq1542
Length=4837
Score = 87.8 bits (96), Expect = 4e-12
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 82689 TGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTA 82748
|| || ||||| || ||||||||||| || || |||||||| || ||||||||||| |
Sbjct 11 TGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATGGAG 70
Query 82749 TCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGC 82808
|| || || || || | ||| || ||||| || ||||| ||||| || || || |||
Sbjct 71 TCGGAGGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGACGAAGATTTGC 130
Query 82809 ATTATTATATT 82819
||| | | |||
Sbjct 131 ATTCTAAAATT 141
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981764339433983
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |