Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq496 116 7e-21 >seq496 Length=57215 Score = 116 bits (128), Expect = 7e-21 Identities = 184/261 (70%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 183025 TGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCATAGTTTTTTACGAATG 183084 |||||||| | |||| ||| || | |||||| |||||||| |||| | |||||| Sbjct 40580 TGGAATGCCGCTCAAAACCAGTTGCGCAAAGAAGGCAAAATGCACGGTTTCCTTCGAATG 40639 Query 183085 TACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGATGCTTTGAGTTATAGT 183144 |||||||| || ||||| || || |||| ||| || || || ||| | | | Sbjct 40640 TACTGGGCCAAGAAGATCCTCGAGTGGATGTCAACGCCAGATGAAGCTCTTGCCACTGCT 40699 Query 183145 ATCTATATGAACAATAAGTACGAACTAGACGGTACG-GATCCTAACGGATACGTAGGTTG 183203 ||||| | ||| || ||| | | ||||| ||| ||||| ||||||||||| || || Sbjct 40700 ATCTACCTCAACGATCGCTACAACTTGGACGG-ACGTGATCCAAACGGATACGTCGGATG 40758 Query 183204 TATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCTATATTTGGAAA 183263 |||||| ||| | ||| | ||||| | | ||||||||| || | |||| || || Sbjct 40759 CATGTGGAGCATTGGAGGAATTCACGACATGGGCTGGAAAGAACGAGATGTATTCGGCAA 40818 Query 183264 GATAAGATATATGAATTATGA 183284 ||| || |||||||| || || Sbjct 40819 GATCAGGTATATGAACTACGA 40839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903354770677920