Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1280 219 4e-52 seq108 143 3e-29 seq29 98.7 1e-15 seq1542 95.1 1e-14 seq1975 84.2 2e-11 >seq1280 Length=9399 Score = 219 bits (242), Expect = 4e-52 Identities = 1198/1881 (64%), Gaps = 56/1881 (3%) Strand=Plus/Minus Query 147935 GTAGGCAGCGGGTTGAGTGCGCAGATAGTACATGCCCGTCTTGAGGCCCATGCGCCATGC 147994 || |||||| || | ||||||| ||||||||| || ||||| | |||||| ||| | Sbjct 3249 GTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCCGGTCTTCAAGCCCATTTTCCAGCC 3190 Query 147995 GTAGTCGTGCACCGACGACATGAGCGTGTACGTCGGGTGCGGC-ACAAACAGATTAAACG 148053 || | ||| | |||| || ||| | || | |||| || || || || | Sbjct 3189 GTGGAAGTGAATTGACGTCAGTTTTCCGTAGTTTGGCT-CGGCGACGTGCACGTTGAATG 3131 Query 148054 ACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGAGTCGCTTTATCT 148113 |||| ||| || |||||||| || || || || ||||| | || | ||| | Sbjct 3130 ACTGCGACTGATCGATGAACGCACCGCGATCGGCTGCCATCTGGATCTGCGTCTTGACTG 3071 Query 148114 TCATCTCCCAGGCCGTCTTGTACAGC-CGCTTGATATGATCGGGAATGCCGTCGATGCGC 148172 |||||||||| | |||||||||| | ||| ||| | |||| || |||||| | Sbjct 3070 ACATCTCCCAGACGGTCTTGTACAACTCGCG-GATGTCGGCGGGGATCTTCTCGATGTTC 3012 Query 148173 TGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGC 148232 || || || ||| | || | |||| || ||| ||||| | || | | Sbjct 3011 TGAACTGATCCGTTGCTAGCGATGATCTCGTTCTTCATGTCGTCGTCCCAGAGATCTCGT 2952 Query 148233 TCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGC 148292 ||| | || || | ||| |||| ||||| || | |||||| || ||| ||| ||| Sbjct 2951 TCGGTGAGATCCTTGATGAGATGGTGATTGACGATCTGAAATTCTCCGCTCAGCGTGCGG 2892 Query 148293 CGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCG 148352 || || |||||||| || |||| || || ||||||||||| | |||||| || Sbjct 2891 CGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGCTTTCGTTGTTGCCGAGAATCTGTGCA 2832 Query 148353 GTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATT 148412 |||| || || ||||| || | || || || ||||||| ||| | | || Sbjct 2831 GTCGAAGCAGTCGGCATTGGAGCGAGGAGAAGTGAATTGCGCACTCCGTGCTCGGCGATC 2772 Query 148413 TTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTAC 148472 || |||||| | ||||||||||| | | |||||| | ||||||||||||| Sbjct 2771 TTAGCCTTCAGGACAGCCCAGTCCCACAAGTTGGTTGGTGTCTTTTCCCACATGTCGTAC 2712 Query 148473 TGCAGAATGCC--GCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCG 148530 |||| || || || | | ||| | | || ||||| | ||| | ||| || | Sbjct 2711 TGCAAGATTCCTTTCGAC-ACCGGCGAT-CCTTCGTAGGTTTCGTAAGTACCGAGCTCTC 2654 Query 148531 CCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGT 148590 || ||||| || || ||||| |||||||||||||| ||||||||| || ||| || Sbjct 2653 TGGCGAGTTCACAACTTGCCTCAAGCGCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGT 2594 Query 148591 TGAGCAGCGCCGCCGACTCGC-TTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCA 148649 | ||| | | || | || ||| |||| || || | | || |||||||| Sbjct 2593 TCAGCTTCTGTG-CGTTTGGCGACTCGAACGGATAACTCATCGTGATGAAAGCGTCGGCC 2535 Query 148650 AGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCT-C 148708 ||||| || | ||| | || || || || || ||||| || | || |||| Sbjct 2534 AGGCCTTGAATGCCGATACCGATCGGGCGATGACGCATGTTCGATCGCTTAGC-CTCTGG 2476 Query 148709 GAGCGGATAGTGGTTGCGGTCGATGATCTTG-TCAAG---ATTGCGCACCACCACCTTTG 148764 || ||| |||| |||| |||||||||||| ||||| ||| | || ||| | Sbjct 2475 GATCGGGTAGTAGTTGACATCGATGATCTTGTTCAAGTTCTTTGTG----ACAGTCTTGG 2420 Query 148765 T-AATTCTGCGCAGCAATTCAAAATCGTA---CTTGTCATCTACG-----ATGCATCGGT 148815 | | ||| | ||| || || ||||| |||| | | || | ||| || Sbjct 2419 TGACTTCCTTG-AGCTTTTGGAAGTCGTAAGTCTTGGCTGATGCGTTCACAAACAT--GT 2363 Query 148816 TCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGA 148875 | || ||||| || || |||||||| ||||| || ||| | | ||||| | || Sbjct 2362 TGACAGCGATCGATGCCAGATTGCAGACGGCGACTTCGTCCTTGCTGGAATACTCGATGA 2303 Query 148876 TCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGT 148935 | || | ||||| ||| ||| || ||| ||||||| || || ||| | || Sbjct 2302 TTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGACGTTCTGCTGGTTCGACTTTCGGT 2243 Query 148936 TGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG- 148994 |||| ||||||||||||| |||||| || |||||| || || || | || | ||| Sbjct 2242 TGCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTCTCGACTTGTGACTCGATGATGG 2183 Query 148995 -AACCGATGCAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAA 149053 || | | || ||| || || | || | ||| || || || |||||| Sbjct 2182 CAAACCA--CAAGTCTTGAGCCTTGATCTGGCGGAGGTAACGGCCTTCGGCTTCGTATCT 2125 Query 149054 AGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGG 149113 |||| | ||||||| | ||||| | | |||| ||| || || || ||||||| Sbjct 2124 CTCGTACAACTTCTCGAACTCTTCGCCCCACGAGTCGTAGAGGCCTGGACAGCTGTGCGG 2065 Query 149114 GCACATGAGCGACCACACGCCGTCCGCGTAC-ACGCGCTTCATAAACAGATCGGGCACCC 149172 ||||| | |||||| || |||| || | | ||||| ||| |||| |||||| | || Sbjct 2064 ACACATCAACGACCAGACTCCGT-TGCTTTCAACGCGACGCATGAACAAATCGGGAATCC 2006 Query 149173 AGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGT 149232 | | ||||| | | ||| || || ||||| ||| |||| || | Sbjct 2005 ACAAAGCGTAGAACATGTCACGAGCACGAACTTCTTCTTTGCCAGTGTTTTTCTTGAGAT 1946 Query 149233 TGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGC 149292 ||| | ||| | ||| ||||||||||||| | || | |||| || || | Sbjct 1945 CGAGGAACTCGAAGACGTCGCCGTGCCACGGCTCGAGATAAATTGCGAAAGCACCTGGTC 1886 Query 149293 GCTTG---CCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTT 149349 ||||| ||||| ||||| || | ||| | ||||||| | || || | ||| || Sbjct 1885 GCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGTTGTTGTAAACACGCAACATTGGAA 1826 Query 149350 CAATGCCACTGGCAGTGCCGTTAGT-AGAGCTA-ATGCGACTGCCGCGCGCTCGCACTTT 149407 ||| || | | | ||||| || || | || || | || || || | Sbjct 1825 CAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGATATACG--TTCCCTTGGCGCGAATACA 1768 Query 149408 GTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCG 149466 |||||||||||| ||||| ||||| |||| |||| ||| ||||| | |||| Sbjct 1767 GTGCACGTTGACACCGATACCGCCAGCCG-ACTTGCTGATCAAAGCGCATTGTTTCAGCG 1709 Query 149467 TCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTT 149526 | ||| ||||| || || ||| ||| | || || || ||||| | | | Sbjct 1708 TATCGTAAATGCCGTCAATTGAGTCATCGGACATCGACAACAAGAAACACGACGAAAGCT 1649 Query 149527 GCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATA--TTTCTG 149584 |||| | |||| |||| ||||| | || || ||| || || || || ||| | Sbjct 1648 GCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGAGGCATGGGTGAAGTAGCGTTCAG 1589 Query 149585 GCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGC 149644 || | | ||| | ||| | | ||| ||||| || ||||||||||| | ||| Sbjct 1588 --ACAAAAGGTTGTAAGTCTCAATGGCCGAGTCGATGTCTTCACCATGGATGCCCACGGC 1531 Query 149645 GACGCGCATCAGCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTA 149704 || | ||| ||||| || ||||| ||||| || | ||| | | || |||||||| Sbjct 1530 AACTCTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTTGCCTTTGTTCTTCAGCAAGTA 1471 Query 149705 GCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAAT 149764 || | || | |||||| | || ||||| |||||| | ||||||||| ||| | || Sbjct 1470 GCTGCGCTCCAAAGTCTTGAATCCGAAGTAATTGTAGCCGAAGTCGCGGTCGTAGATGAT 1411 Query 149765 GGCGGCGT-----CGATCAGC 149780 ||| | || |||||||| Sbjct 1410 GGCAGAGTTCAAGCGATCAGC 1390 >seq108 Length=162490 Score = 143 bits (158), Expect = 3e-29 Identities = 152/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| |||| || ||| ||| ||| || ||||||||||| Sbjct 111867 GTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACC-GTCTTCAAGCTGCTTGCC 111925 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || ||||| |||||||||||||| |||||| ||| Sbjct 111926 AGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTT 111985 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| | ||||| || |||| ||||| ||| |||||||| || || Sbjct 111986 GACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGT 112045 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| ||||| || ||||| Sbjct 112046 TTTCACGAAGATTTGCAT 112063 >seq29 Length=258594 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || || ||||| |||| || || | | | || || | ||||| || Sbjct 96619 GTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCA-TCTTCCAATTGCTTTCC 96561 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||||||||| || || |||||||| ||||| |||||| ||| Sbjct 96560 GGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTTGGCCTT 96501 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | ||||| | ||||| || |||| ||| | |||||| || |||| || Sbjct 96500 GACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTTTTACCCGTCAATGT 96441 Query 133643 TTTTACGAAAATCTGCATGGC 133663 ||| ||||| || |||||||| Sbjct 96440 TTTGACGAAGATTTGCATGGC 96420 >seq1542 Length=4837 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 133536 CGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTCAACC 133595 ||||||||||| || ||||| ||||||||||| ||||||| ||||| | |||| Sbjct 8 CGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCCTGGATCTTTGCCTTGACATTTTCAATG 67 Query 133596 GTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAAAATC 133655 | ||||| |||||| || |||| |||| ||| || ||||||| || || ||||| || Sbjct 68 GAGTCGGAGGGCTCAACCTCGAGAGTGATGGTCTTTCCGGTCAATGTCTTGACGAAGATT 127 Query 133656 TGCAT 133660 ||||| Sbjct 128 TGCAT 132 >seq1975 Length=2172 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || ||||| |||| || ||| ||| | || ||||||||||| || Sbjct 2017 GTCGATTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCA-TCTTCGAGCTGCTTTCC 2075 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| || ||||| |||||||| || ||||||| ||| Sbjct 2076 AGCAAAGATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTATCCTGGATCTTTGCCTT 2135 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTC 133615 | | ||||| | ||| | ||||| || || Sbjct 2136 AACGTTCTCAATGGAGTCTGATGGCTCGACTTC 2168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483390604328280