Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1280 104 6e-17 >seq1280 Length=9399 Score = 104 bits (114), Expect = 6e-17 Identities = 362/559 (65%), Gaps = 11/559 (2%) Strand=Plus/Plus Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602 |||||| || ||||| || ||||| ||| | || ||| || ||| ||| || | || Sbjct 1680 CGATGACTCAATTGACGGCATTTACGATACGCTGAAACAA--TGCGCTTTGATC-AGCAA 1736 Query 110603 CTC---TGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659 || ||| || || ||| | |||| || ||||||| | || ||| | ||||||| Sbjct 1737 GTCGGCTGGCGGTATCGGTGTCAACGTGCACTGTATTCGCGCCAAGGGAACGTATATCGC 1796 Query 110660 AA-CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTG 110718 || | | ||| || ||| ||||||||||||||||| | || | |||| |||| | Sbjct 1797 CGGCACCAACGGGATCTCAAAC-GGACTTGTTCCAATGTTGCGTGTTTACAACAACACCG 1855 Query 110719 CAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAAC 110775 | ||||| | ||||| || ||| || || | || || || |||||||| | Sbjct 1856 CTCGCTATGTAGACCAAGGCGGAAACAAGCGACCAGGTGCTTTCGCAATTTATCTCGAGC 1915 Query 110776 CTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAAC 110835 | ||||| || | || || ||| | || || ||||| || |||||| Sbjct 1916 CGTGGCACGGCGACGTCTTCGAGTTCCTCGATCTCAAGAAAAACACTGGCAAAGAAGAAG 1975 Query 110836 AAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTC 110895 | || ||||| | || || || |||||||| | ||||| |||||| || ||| Sbjct 1976 TTCGTGCTCGTGACATGTTCTACGCTTTGTGGATTCCCGATTTGTTCATGCGTCGCGTTG 2035 Query 110896 AAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTAT 110955 || || || | ||||| | |||||||| || | | ||| || || | || | Sbjct 2036 AAAGCAACGGAGTCTGGTCGTTGATGTGTCCGCACAGCTGTCCAGGCCTCTACGACTCGT 2095 Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAAC 111015 || ||||||| || | | ||||| | ||| ||| |||||| | | | | Sbjct 2096 GGGGCGAAGAGTTCGAGAAGTTGTACGAGAGATACGAAGCCGAAGGCCGTTACCTCCGCC 2155 Query 111016 AAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTC 111075 | || |||||||| | ||||| ||| | || |||||||| || ||||| || | Sbjct 2156 AGATCAAGGCTCAAGACTTGTGGTTTGCCATCATCGAGTCACAAGTCGAGACTGGCACGC 2215 Query 111076 CTTATATTTTGTATAAAGA 111094 |||| || ||||| || || Sbjct 2216 CTTACATGTTGTACAAGGA 2234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186736815423117