Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq1280 104 6e-17
>seq1280
Length=9399
Score = 104 bits (114), Expect = 6e-17
Identities = 362/559 (65%), Gaps = 11/559 (2%)
Strand=Plus/Plus
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|||||| || ||||| || ||||| ||| | || ||| || ||| ||| || | ||
Sbjct 1680 CGATGACTCAATTGACGGCATTTACGATACGCTGAAACAA--TGCGCTTTGATC-AGCAA 1736
Query 110603 CTC---TGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659
|| ||| || || ||| | |||| || ||||||| | || ||| | |||||||
Sbjct 1737 GTCGGCTGGCGGTATCGGTGTCAACGTGCACTGTATTCGCGCCAAGGGAACGTATATCGC 1796
Query 110660 AA-CAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTG 110718
|| | | ||| || ||| ||||||||||||||||| | || | |||| |||| |
Sbjct 1797 CGGCACCAACGGGATCTCAAAC-GGACTTGTTCCAATGTTGCGTGTTTACAACAACACCG 1855
Query 110719 CAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAAC 110775
| ||||| | ||||| || ||| || || | || || || |||||||| |
Sbjct 1856 CTCGCTATGTAGACCAAGGCGGAAACAAGCGACCAGGTGCTTTCGCAATTTATCTCGAGC 1915
Query 110776 CTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAAC 110835
| ||||| || | || || ||| | || || ||||| || ||||||
Sbjct 1916 CGTGGCACGGCGACGTCTTCGAGTTCCTCGATCTCAAGAAAAACACTGGCAAAGAAGAAG 1975
Query 110836 AAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTC 110895
| || ||||| | || || || |||||||| | ||||| |||||| || |||
Sbjct 1976 TTCGTGCTCGTGACATGTTCTACGCTTTGTGGATTCCCGATTTGTTCATGCGTCGCGTTG 2035
Query 110896 AAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTAT 110955
|| || || | ||||| | |||||||| || | | ||| || || | || |
Sbjct 2036 AAAGCAACGGAGTCTGGTCGTTGATGTGTCCGCACAGCTGTCCAGGCCTCTACGACTCGT 2095
Query 110956 ATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAAC 111015
|| ||||||| || | | ||||| | ||| ||| |||||| | | | |
Sbjct 2096 GGGGCGAAGAGTTCGAGAAGTTGTACGAGAGATACGAAGCCGAAGGCCGTTACCTCCGCC 2155
Query 111016 AAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTC 111075
| || |||||||| | ||||| ||| | || |||||||| || ||||| || |
Sbjct 2156 AGATCAAGGCTCAAGACTTGTGGTTTGCCATCATCGAGTCACAAGTCGAGACTGGCACGC 2215
Query 111076 CTTATATTTTGTATAAAGA 111094
|||| || ||||| || ||
Sbjct 2216 CTTACATGTTGTACAAGGA 2234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186736815423117
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |