Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1280 208 7e-49 seq29 100 3e-16 seq108 95.1 1e-14 seq1975 86.0 6e-12 >seq1280 Length=9399 Score = 208 bits (230), Expect = 7e-49 Identities = 1201/1885 (64%), Gaps = 55/1885 (3%) Strand=Plus/Minus Query 146551 ACAGTGAATTGTTGTGTGTGCGCCGCAGGTTTTGTGCGCAAATAATACATGCCCGTTTTG 146610 || ||||| || || || || || || || ||||||||||| ||||| || || || Sbjct 3266 ACTGTGAACTGAATTGCGTTGGCAGCTGGCTTGGTGCGCAAATAGTACATTCCGGTCTTC 3207 Query 146611 AGGCCACATCGCCACGAGTGATTGTGAATCGAAGTCATGATGGCGTACGTCGGCTCCGCC 146670 | ||| | ||| ||| |||||| || |||| | |||| | ||||| || Sbjct 3206 AAGCCCATTTTCCAGCCGTGGAAGTGAATTGACGTCAGTTTTCCGTAGTTTGGCTCGGCG 3147 Query 146671 ACGAAAAGATTAAACGATTGGCTTTGATCTATGAAAGCGTTGCGGTCGGCCGCCATCTCA 146730 ||| | || || || || ||||| ||||| || ||| ||||| ||||||| Sbjct 3146 ACGTGCACGTTGAATGACTGCGACTGATCGATGAACGCACCGCGATCGGCTGCCATCTGG 3087 Query 146731 ATCATGCGTTTTGTCTT-CATTTCCCAAGCGGTTTTGTACAGCCCCTTAACGCTATCTGG 146789 ||| ||||| ||| || ||| ||||| |||| ||||||| | | | | | || Sbjct 3086 ATC-TGCGTCTTGACTGACATCTCCCAGACGGTCTTGTACAACTCGCGGATGTCGGCGGG 3028 Query 146790 AATACCTTCAATGTTTTGAATAGAGCCCTTGTGCGCAAAAATAGTGTTTCGTATTTCGGG 146849 || || ||||| |||| || || ||| || | || ||| || ||| Sbjct 3027 GATCTTCTCGATGTTCTGAACTGATCCGTTGCTAGCGATGATCTCGTTCTTCATGTCGT- 2969 Query 146850 CGTGTAA-AGGTTTAGTTTAATGAGGTCATCAATTAAATACTGATTGACCACTTGAAACT 146908 ||| | || | | ||| |||| || | || | || |||||||| | ||||| | Sbjct 2968 CGTCCCAGAGATCTCGTTCGGTGAGATCCTTGATGAGATGGTGATTGACGATCTGAAATT 2909 Query 146909 CGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCATTAT 146968 | || |||| || | | || || ||||| ||| | ||||| || || || | Sbjct 2908 CTCCGCTCAGCGTGCGGCGGTTGTAGACGTTGCTGGTGTACGGCTCGAAGCTTTCGTTGT 2849 Query 146969 TGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTTCGCA 147028 |||| | || || || || | || || ||||| || | | | |||||| |||| Sbjct 2848 TGCCGAGAATCTGTGCAGTCGAAGCAGTCGGCATTGGAGCGAGGAGAAGTGAATTGCGCA 2789 Query 147029 GACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCACATCGACGAGGGCGTCA 147088 |||| | | ||| || |||||| ||||||||||| | || ||| Sbjct 2788 CTCCGTGCTCGGCGATCTTAGCCTTCAGGACAGCCCAGTCCCACAAGTTGGTTGGTGTCT 2729 Query 147089 CGTTCCACATGTCGTACTGGAGCACTCCT--CGACTGGCGGGACTGCCAGCGAACGTAGT 147146 | ||||||||||||||| | | |||| |||| | || || || | || Sbjct 2728 TTTCCCACATGTCGTACTGCAAGATTCCTTTCGACACCGGCGAT--CCTTCGTAGGTTTC 2671 Query 147147 GTAGCTTCCGT-CGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTATATGG 147205 ||| | ||| | | ||| || | |||||| |||||||| ||||| || ||||| || | Sbjct 2670 GTAAGTACCGAGCTCTCTG-GCGAGTTCACAACTTGCCTCAAGCGCGCCGTAGTAGATCG 2612 Query 147206 TTTCGGCGATTTGTTTGTTTAGGA-CGGTCGCTTCTTCGCT-CTCGTAAGGCATACGCAG 147263 | ||| ||| || | ||| || | || || | || || |||| | || || || Sbjct 2611 TCTCGAAGATCTGCTGGTTCAGCTTCTGT-GCGT-TTGGCGACTCGAACGGATAACTCAT 2554 Query 147264 AAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATGC----TTTT 147319 | || || ||||||| || || || |||| ||||| || ||||| | || Sbjct 2553 CGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGGCGATGACGCATGTT 2494 Query 147320 CGTTGCTGCGCTTCGCGCTC-GCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGG 147378 || | ||||| || ||| | || || |||| |||| ||| || |||||||| | | Sbjct 2493 CGAT----CGCTTAGC-CTCTGGGATCGGGTAGTAGTTGACATCGATGATCTTGTTCAAG 2439 Query 147379 TTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGTCCCGTCTTCG 147438 || ||| || || | | ||||| || | ||| || |||||| | || | Sbjct 2438 TTCTTTGTGACAGTCTTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAAGTCTTGGCT--G 2381 Query 147439 ACACGTACGCATTG--GTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGG 147496 | ||| | || ||| || ||||| || ||||||||||||||||| ||||| Sbjct 2380 ATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACGGCGA---CTTCGT 2324 Query 147497 CGTCGCTG---TACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAAT 147553 | | |||| |||| | |||||| | ||||| |||| ||| ||| || | | Sbjct 2323 CCTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATGGTGCCGACGT 2264 Query 147554 TTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCT 147613 | ||||| || || || ||||| ||||| ||| | | |||||| || ||| |||| Sbjct 2263 TCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAGGCGTGCCAGTCT 2204 Query 147614 CGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGAT 147670 ||||||| | || | ||| ||||| || ||| || || | | | | | | Sbjct 2203 CGACTTGTGACTCGATGATGGCAAACCA---CAAGTCTTGAGCCTTGATCTGGCGGAGGT 2147 Query 147671 AGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGG 147730 | ||||| ||| |||||| | |||||||||| ||| ||||| ||||| | | ||| Sbjct 2146 AACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCCCCACGAGTCGT 2087 Query 147731 CAAGGCCGGGACA-CTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTT-AACGCG 147788 ||||| ||||| ||| ||||||||||||| |||||| | ||| || || |||||| Sbjct 2086 AGAGGCCTGGACAGCTG-TGCGGACACATCAACGACCAGACTCCGT-TGCTTTCAACGCG 2029 Query 147789 TCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTC 147848 ||||| |||| ||| || | ||||| ||||| | | || || || || || Sbjct 2028 ACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGAACTTCTTC 1969 Query 147849 GGCGCCCATGTTGCGTTTCAAAT-TAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAA 147907 ||| |||| || | || | | || | | ||| |||| ||||||| || || | Sbjct 1968 TTTGCCAGTGTTTTTCTTGAGATCGAGGAACTCGA-AGACGTCGCCGTGCCACGGCTCGA 1910 Query 147908 TGTAGACGGCCAGCGCACCTTTACGC---TTTCCGCCCTGGTCGACATGGCGCACCATGT 147964 || | || | |||||| ||| |||||||| ||||| |||| ||| | ||| Sbjct 1909 GATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGGTGT 1850 Query 147965 TGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTGGAATTGATCT 148024 |||| | || |||| ||| || | || ||| | | | ||||||||| ||| | Sbjct 1849 TGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGATAT 1790 Query 148025 TGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GCCGTACTTTGAT 148083 | || ||| || | ||||||||| || || || ||||| |||| |||| Sbjct 1789 ACGTTCCCTTGGCGCGAATACAGTGCACGTTGACACCGATACCGCCAGCCG-ACTTGCTG 1731 Query 148084 ATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGA-CGCC 148142 || |||||| | || || ||| |||||||| || ||| | | || | Sbjct 1730 ATCAAAGCGCATTGTTTCAGCGTATCGTAAATGCCGTCAATTGAGTCATCGGACATCGAC 1671 Query 148143 AAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACT 148202 || ||| |||||||| | | ||||| |||| | || | ||| || || || Sbjct 1670 AA-CAAGAAACACGACGAAAGCTGCGGGCGAGGCGTAGCGGCGGCGAAGAGAGTTGGCGA 1612 Query 148203 CGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCAATAGCGTCTTCGATGTC 148262 || || || || | || | || | | || |||||||| || |||||||| Sbjct 1611 GGCATGGGTGAAGTAGCGTTCAGACAAAAGGTTGTAAGTCTCAATGGCCGAGTCGATGTC 1552 Query 148263 GTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTCGTTCGGC-AACTT 148321 || || || ||||||| || || | |||||||||||| || || || ||||| | ||| Sbjct 1551 TTCACCATGGATGCCCACGGCAACTCTCATGAGCATGTGTTGCGGGCGCTCGGCGATCTT 1492 Query 148322 GATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCAAAGTACTTGTAAT 148381 | | ||| |||| || | || | || | || ||| | || ||||| ||||| Sbjct 1491 GCCT-TTGTTCTTCAGCAAGTAGCTGCGCTCCAAAGTCTTGAATCCGAAGTAATTGTAGC 1433 Query 148382 CAAAATCTAGCTCGTAAGCGATGGC 148406 | || || | ||||| |||||| Sbjct 1432 CGAAGTCGCGGTCGTAGATGATGGC 1408 >seq29 Length=258594 Score = 100 bits (110), Expect = 3e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||||| || | ||||| || | | ||||| ||||| |||||||||||||||| || Sbjct 96644 ACGCAGACGGAGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGT 96585 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021 ||| |||||| | || || |||| |||| | ||||| || ||||| || ||||| Sbjct 96584 ACGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCC 96525 Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081 |||||| || || || || | | ||| | ||| || | ||||| || |||| Sbjct 96524 TTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAG 96465 Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | |||||||| |||| ||||| | ||| || |||||| Sbjct 96464 GGTAATGGTTTTACCCGTCAATGTTTTGACGAAGATTTGCATG 96422 >seq108 Length=162490 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | ||||| || ||||||||||||||||||| || || ||||| Sbjct 111854 AACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTC 111913 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 ||||| || || | |||| |||||||| ||||||||||| |||||||| || || Sbjct 111914 AAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTG 111973 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || || || | | ||| | || || | ||||| || |||| || | || || Sbjct 111974 GATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTCTT 112033 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || ||||| | ||| || ||||| Sbjct 112034 GCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063 >seq1975 Length=2172 Score = 86.0 bits (94), Expect = 6e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | || ||||| || |||||||||||||||| ||| || |||||| Sbjct 2004 AACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCATCTTC 2063 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||||| || || | | |||| | ||||| || ||||| || || ||||| ||||| Sbjct 2064 GAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGGGGGATTCCTTCCTTATC 2120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476581429672920