Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq596 150 3e-30 seq1280 116 5e-20 seq1947 113 6e-19 >seq596 Length=46163 Score = 150 bits (166), Expect = 3e-30 Identities = 278/404 (69%), Gaps = 8/404 (2%) Strand=Plus/Minus Query 1455875 CGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGG 1455934 |||||| ||||| ||| || || || ||||| || ||| || ||| |||||||| Sbjct 3234 CGAGCGTCATTTTATCTCCCATGTTCTGGCCTTCTT-CGCAGCTTCCGACGGCATCGTTA 3176 Query 1455935 CCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTT 1455994 ||||||||| | | || || | | || || ||| | ||||||| |||| || | Sbjct 3175 ACGAGAACCTCGTTGAACGGTTCAGCCAGGAAGTGCAAGTCACAGAGGCCCGTTGCTTCT 3116 Query 1455995 ACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACA 1456054 | || |||||||||||||| ||||| ||||||| || | |||||||| || || || | Sbjct 3115 ATGGCTTCCAGATCGCCATGGAAAATGTCCACTCCGAGATGTACTCGCTTCTCATTGAAA 3056 Query 1456055 CCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGT 1456114 ||||| | | ||| | ||| ||| ||| || |||| |||| | | |||| Sbjct 3055 CCTACATTAGAGACTCAAAGGAGCGCGACTTCCTTTTCAACGCCGTCGAGAATCTACCGT 2996 Query 1456115 CGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACA--AGGAGGGCCTCGACAC 1456172 || | ||||||||| |||||||| || | |||||| || | | ||| || Sbjct 2995 GTGTAAAGAAAAAGGCTGACTGGGCCTTGGACTGGATCGCCAGCACAAAGGC----TAAC 2940 Query 1456173 TTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTC 1456231 |||| || || | ||| |||||| || ||||| || || || ||| || || || Sbjct 2939 TTTGGAGAACGCATTATCGCCTTTGCTGCTGTCGAAGGAATTTTCTTCAGCGGAAGCTTT 2880 Query 1456232 TGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 | | ||||| ||||||||||||||||| | ||||| ||||| Sbjct 2879 GCCTCAATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCT 2836 >seq1280 Length=9399 Score = 116 bits (128), Expect = 5e-20 Identities = 189/272 (69%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969 |||||| || |||| || ||||| |||| ||||| ||||||||| ||||||| Sbjct 1600 TTCACCCATGCCTCGCCAACTCTCTTCGCCGCCGCTACGCCTCGCCCGCAGCTTTCGTCG 1659 Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 || || ||||| ||| | || || || || ||||| || || ||||| || || Sbjct 1660 TGTTTCTTGTTGTCGATGTCCGATGACTCAATTGACGGCATTTACGATACGCTGAAACAA 1719 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089 ||||| | ||| |||| |||| ||||| |||||| | || ||| | |||||| Sbjct 1720 TGCGCTTTGATCAGCAAGTCGGCTGGCGGTATCGGTGTCAACGTGCACTGTATTCGCGCC 1779 Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149 ||| | || | || ||||||||||| || ||||| ||||| || ||| | || Sbjct 1780 AAGGGAACGTATATCGCCGGCACCAACGGGATCTCAAACGGACTTGTTCCAATGTTGCGT 1839 Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCA 260181 |||| ||| |||| || ||||| || ||||| Sbjct 1840 GTTTACAACAACACCGCTCGCTATGTAGACCA 1871 >seq1947 Length=2277 Score = 113 bits (124), Expect = 6e-19 Identities = 166/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||| ||||||| | ||||| || |||||| || ||| || || || || || Sbjct 378 ATCTTCAAGGTGTTGAAGCAAGTTCACCCCGACAC---TGGAATCTCATCGAA--AG-CC 325 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||||||||||||| || ||||||||||| |||| ||||||| | | || || Sbjct 324 ATGTCGATCATGAACAGCTTCGTCAACGACATCTTCGAGCGCATCGCCGCTGAAGCTTCC 265 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||| |||| | || ||||||||| || ||| || | || ||||| || ||||| Sbjct 264 CGCTTGGCCCACTACAACAAGCGATCGACCATCACCAGCAGAGAAATCCAAACTGCCGTT 205 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || | ||| ||| ||| |||||| ||||||||| || || ||||||| Sbjct 204 CGTCTCTTGCTGCCCGGTGAATTGGCCAAGCACGCCGTGTCTGAAGGCACCA 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177329230165514