Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1280 237 2e-57 seq108 141 9e-29 seq29 116 4e-21 seq1975 98.7 1e-15 seq773 84.2 2e-11 >seq1280 Length=9399 Score = 237 bits (262), Expect = 2e-57 Identities = 1189/1855 (64%), Gaps = 57/1855 (3%) Strand=Plus/Plus Query 7472 ACGAGCGCGATTACGATTACCGTTATTTTGCCGTAAAAACTTTAAAAAACGGCTACTTGT 7531 |||| ||||| | || ||| ||| || | | || ||||| | | |||||||| Sbjct 1418 ACGACCGCGACTTCGGCTACAATTACTTCGGATTCAAGACTTTGGAGCGCAGCTACTTGC 1477 Query 7532 TGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGG 7591 |||| | ||| ||| | ||| || || ||||||||||| || | || || |||| Sbjct 1478 TGAAGAACAAAGGCAAGATCGCCGAGCGCCCGCAACACATGCTCATGAGAGTTGCCGTGG 1537 Query 7592 GCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAA-- 7649 |||| || || |||||||| ||| | ||| | || || ||| | | |||| |||| Sbjct 1538 GCATCCATGGTGAAGACATCGACTCGGCCATTGAGACTTACAACCTTTTGTC--TGAACG 1595 Query 7650 ACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCAC-AAACGCGCCTCAATTGT 7708 | || || || || ||||| || | || ||||| | || ||| || || | | Sbjct 1596 CTACTTCACCCATGCCTCGCCAACTCTCTTCGCCGCCGCTACGCCTCGC-CCGCAGCTTT 1654 Query 7709 CCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGC 7768 | |||||||| ||| | | ||| ||| ||| || |||||||||||| | |||||| Sbjct 1655 CGTCGTGTTTCTTGTTGTCGATGTCCGATGACTCAATTGACGGCATTTACGATACGCTGA 1714 Query 7769 GCGATTGCGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGTAAACGACGTG 7827 | ||||| || ||| | |||| ||||| || ||| | ||||| || | Sbjct 1715 AACAATGCGCTTTGATCAGCAAGT-CGGCTGGCGGTATCGGTGTCAACGTGCACTGTATT 1773 Query 7828 CGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATG 7887 |||||||| || | |||| ||||||||| | | | ||| | | || ||| Sbjct 1774 CGCGCCAAGGGAACGTATATCGCCGGCACCAACGGGATCTCAAACGGACTTGTTCCAATG 1833 Query 7888 TTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGA---AAGCGCAAAGGC 7944 ||||| || | ||| ||| | | || |||||||||| || ||| ||||| ||| Sbjct 1834 TTGCGTGTTTACAACAACACCGCTCGCTATGTAGACCAAGGCGGAAACAAGCGACCAGGT 1893 Query 7945 GCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGT 8004 || || || ||| | ||||||||||||| ||| | | || | || |||| Sbjct 1894 GCTTTCGCAATTTATCTCGAGCCGTGGCACGGCGACGTCTTCGAGTTCCTCGATCTCAAG 1953 Query 8005 CGCAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCC 8064 |||| || ||||| || || || | |||| || |||||| | ||| Sbjct 1954 AAAAACACTGGCAAAGAAGAAGTTCGTGCTCGTGACATGTTCTACGCTTTGTGGATTCCC 2013 Query 8065 GATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGT 8124 ||| |||| ||| | |||||| | | ||| | |||||| | ||||| || | | Sbjct 2014 GATTTGTTCATGCGTCGCGTTGAAAGCAACGGAGTCTGGTCGTTGATGTGTCCGCACAGC 2073 Query 8125 TGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAA 8184 || || | | || | || | | || || | |||||| | ||||||| Sbjct 2074 TGTCCAGGCCTCTACGACTCGTGGGGCGAAGAGTTCGAGAAGTTGTACGAGAGATACGAA 2133 Query 8185 CACGACGGCGCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATTATCGAA 8244 ||| ||| ||| | || || | || || | ||| || ||||| ||||| Sbjct 2134 GCCGAAGGCCGTTACCTCCGCCAGATCAAGGCTCAAGACTTGTGGTTTGCCATCATCGAG 2193 Query 8245 TGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGC 8304 | ||| ||| || || | ||| |||||| ||||||| |||||||||||| | ||| | Sbjct 2194 TCACAAGTCGAGACTGGCACGCCTTACATGTTGTACAAGGACGCTTGCAAC-CGAAAGTC 2252 Query 8305 -AATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTA 8363 || || ||||| ||||||||| ||||| ||| ||||| | ||||| | |||| Sbjct 2253 GAACCAGCAGAACGTCGGCACCATTCGTTGCTCCAACTTGTGCACGGAAATCATCGAGTA 2312 Query 8364 ---CAGCGCGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTT 8420 |||| | |||||||| ||||| |||||||| || ||| | | | ||| ||| Sbjct 2313 TTCCAGCAAG---GACGAAGTCGCCGTCTGCAATCTGGCATCGATCGCTGTCAACATGTT 2369 Query 8421 CGTTGATCGACGC-TCA---AACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAG 8476 | ||| |||| ||| || ||||||||||| || | | || | | | |||| Sbjct 2370 TG-TGA---ACGCATCAGCCAAGACTTACGACTTCCAAAAGCTCAAGGAAGTC-ACCAAG 2424 Query 8477 --TGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGC 8534 || | | | || || | ||||| |||||||| | || || | ||| || Sbjct 2425 ACTGTCACAAAG-AACTTGAACAAGATCATCGATGTCAACTACTACCCGATCCCAGAGGC 2483 Query 8535 -GCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACG 8593 ||| |||||||||||| || | || | || | ||| | ||||| |||||||||| Sbjct 2484 TAAGCG-ATCGAACATGCGTCATCGCCCGATCGGTATCGGCATTCAAGGCCTGGCCGACG 2542 Query 8594 CGTTTGCCATGTTGCGCCTCCCCTACGA-AAGCCAAGAAGCGCGCATGCTCAACATAAAA 8652 | || || | || | || | ||| ||||| | || | | ||| ||| | Sbjct 2543 CTTTCATCACGATGAGTTATCCGTTCGAGTCGCCAA-ACGCACAGAAGCTGAACCAGCAG 2601 Query 8653 ATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTG 8712 || || ||| | || |||||||| | || || || ||| |||| ||| |||| | Sbjct 2602 ATCTTCGAGACGATCTACTACGGCGCGCTTGAGGCAAGTTGTGAACTCGCCAGAGAGCTC 2661 Query 8713 GGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCG--CGGAATATTGCAATACGACA 8770 || || |||||| | |||| || | | | | | || ||||| ||||| ||||||| Sbjct 2662 GGTACTTACGAAACCTACGAAGG-ATCGCCG-GTGTCGAAAGGAATCTTGCAGTACGACA 2719 Query 8771 TGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTC 8830 ||||| | || || ||| |||||| | ||| | |||| || || || Sbjct 2720 TGTGGGAAAAGACACCAACCAACTTGTGGGACTGGGCTGTCCTGAAGGCTAAGATCGCCG 2779 Query 8831 AATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAA 8890 | ||| |||||||||| || | | ||| ||||| || || ||||||| || | Sbjct 2780 AGCACGGAGTGCGCAATTCACTTCTCCTCGCTCCAATGCCGACTGCTTCGACTGCACAGA 2839 Query 8891 TAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGT 8950 | | || ||||||||| ||| ||||||| ||||| |||||| ||| | || | Sbjct 2840 TTCTCGGCAACAACGAAAGCTTCGAGCCGTACACCAGCAACGTCTACAACCGCCGCACGC 2899 Query 8951 TGGCCGGCGATTTTTTAATGCTGAATCGTCATTTGATGCGCGACTTGATCGAA-GCGGGC 9009 || ||| || ||| || | |||| ||| | || || | | |||| | | | Sbjct 2900 TGAGCGGAGAATTTCAGATCGTCAATCACCATCTCATCAAGGATCTCACCGAACGAGATC 2959 Query 9010 GTT--TACGACGACAAAATGCGCGATGCCATCGTGGAAGCCAACGGCAGCGTTCAGAACA 9067 | ||||||||| | | ||| |||| | || |||||| |||||||||| Sbjct 2960 TCTGGGACGACGACATGAAGAACGAGATCATC--GCTAG-CAACGGATCAGTTCAGAACA 3016 Query 9068 TTGACGCGGTGCCTCAACACATTAAAGAGCTGTATAAAACCGTTTGGGAAATG-AAGCAA 9126 | || | | || |||| ||| |||| || ||||| ||||| ||| || | Sbjct 3017 TCGAGAAGATCCCCGCCGACATCCGCGAGTTGTACAAGACCGTCTGGGAGATGTCAGTCA 3076 Query 9127 AGCACGCTGATCGGCATGGCTGCGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTT 9186 || |||| |||| ||||| || ||| | || || || || |||||| || || || Sbjct 3077 AG-ACGCAGATCCAGATGGCAGCCGATCGCGGTGCGTTCATCGATCAGTCGCAGTCATTC 3135 Query 9187 AACGTGTTCGTAGCCGCACCAACTTACG---CTTTGATGTCCAGCATTCATTATTTAAC- 9242 |||||| ||| |||| |||| |||| ||| ||| ||||| || || Sbjct 3136 AACGTGCACGTCGCCGAGCCAAACTACGGAAAACTGACGTC---AATTCA--CTTCCACG 3190 Query 9243 -TTGGAAAATGGGTTTAAAAACAGGCATGTACTATTTGCGCACAAAACCCGCCGC 9296 ||||||||||| || || || || ||||||||||||||||| || || || || Sbjct 3191 GCTGGAAAATGGGCTTGAAGACCGGAATGTACTATTTGCGCACCAAGCCAGCTGC 3245 >seq108 Length=162490 Score = 141 bits (156), Expect = 9e-29 Identities = 156/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || ||||| |||||||||||||||| | ||| || ||| || ||||| Sbjct 111860 GTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCAAGCTG 111919 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || |||| |||||||||||| || || |||||||| || ||||| || || Sbjct 111920 CTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGGATCTT 111979 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| || | |||||| || | || || ||||| || ||||| || ||||| Sbjct 111980 GGCCTTGACATTTTCAATTGTGTCCGATGGCTCGACCTCGAGGGTGATGGTCTTGCCGGT 112039 Query 134690 TAAAGTTTTAACGAAAATTTGCATTTTG 134717 | ||||| ||||| |||||||| ||| Sbjct 112040 GAGGGTTTTCACGAAGATTTGCATCTTG 112067 >seq29 Length=258594 Score = 116 bits (128), Expect = 4e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || |||||||| ||||||||||||| | || | || || | || Sbjct 96626 GTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTCAGAGTACGTCCATCTTCCAATTG 96567 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || || ||||| |||||||| || || || ||||||||||| || || || || Sbjct 96566 CTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGAATGCCTTCTTTGTCCTGGATCTT 96507 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| || | ||||| || | || || ||||| |||||||||||||| || Sbjct 96506 GGCCTTGACATTTTCGATAGTGTCCGATGGCTCAACCTCGAGGGTAATGGTTTTACCCGT 96447 Query 134690 TAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| ||||| |||||||| Sbjct 96446 CAATGTTTTGACGAAGATTTGCAT 96423 >seq1975 Length=2172 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 |||||||| | ||| || | || | ||| || || ||||| || || |||||||||||| Sbjct 1984 TTTCCTCCACGGAGACGAAGAACCAAGTGCAGTGTCGATTCTTTCTGGATGTTGTAGTCG 2043 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | | |||| || || |||||||| || || ||||| ||||| |||||||| || || Sbjct 2044 CTCAAGGTGCGACCATCTTCGAGCTGCTTTCCAGCAAAGATCAATCGCTGCTGGTCTGGG 2103 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| || || || || ||| Sbjct 2104 GGGATTCCTTCCTTATCCTGGATCTTT 2130 >seq773 Length=33153 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 |||||||| | ||| || | || | ||| | || ||||| ||||| |||||||||||| Sbjct 120 TTTCCTCCACGGAGACGAAGAACCAAGTGCAATGTCGATTCTTTTTGGATGTTGTAGTCG 61 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 | | |||| || ||| |||||||| || || || || ||||| |||||||| || || Sbjct 60 CTTAAGGTGCGACCGTCTTCGAGCTGCTTTCCAGCGAAGATCAATCGCTGCTGGTCTGG 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505366831552440