Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq596 147 3e-30 seq1280 96.9 5e-15 >seq596 Length=46163 Score = 147 bits (162), Expect = 3e-30 Identities = 540/838 (64%), Gaps = 27/838 (3%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 ||||||||||| || || |||||||| ||||| || || || || | || || | Sbjct 2488 TTTTGGTATTCTCCCACTTTCTTCTCGAAGAAATTCGTCTTTCCCTCGAGCGAGATCGAT 2547 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 |||||||| || ||||| | | ||| || | ||| || ||| | || || | Sbjct 2548 TCCATGAAGGAGAAGGGATTTTTGGTATTGTAGATCTTTCCAACTCCAAGCTCGGACAGA 2607 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGA-G 39504 | | ||| || || || || |||||| ||| | | | || ||||| || | | | Sbjct 2608 AGACGATCGGCCACGAACTCGATGTATTCAGACATTAGTCCGCAGTTCATGCCGAGCATG 2667 Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 | || || || || || || |||||||||| ||| || | ||| ||||||| || || Sbjct 2668 TCGCAC-GGAAGGGCGTCGGTCAGAAACTCTTGTTCAATCTTTACAGCCTCTGAGATGAT 2726 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAAT---AAATGTTTAAACATTAAGCAGGC 39621 | | || || | | ||||| | | | | |||| | ||||| | ||| || Sbjct 2727 CTCGATAACGCGTTCCT---TTGGTGGCTTCTGTTCAAGATGTCTGAACATCAGGCAAGC 2783 Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681 |||||||| || | |||||| || | || | |||||| || || ||||| || || Sbjct 2784 AAAGTCACAGTGCAAGCCCTCGTCACGTGAGATGAGTTCGTTTGAGAAGGTGAGACCTGG 2843 Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCC 39741 ||| | ||| ||||| |||||||| || || | ||||| ||| ||||| || || Sbjct 2844 CATCAAACCGCGCTTCTTGAGCCAGAAGATTGAGGCAAAGCTTCCGCTGAAGAAAATTCC 2903 Query 39742 TTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT-------A 39794 ||| || || ||||| || | || | ||||| || || | | || ||| | Sbjct 2904 TTCGACAGCAGCAAAGGCGATAATGCGTTCTCCA-AAGTT--AGCCTT-TGTGCTGGCGA 2959 Query 39795 TCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAA 39854 |||| | | ||||| ||||| || ||||||||||| || | | || | || || | Sbjct 2960 TCCAGTCCAAGGCCCAGTCAGCCTTTTTCTTTACACACGGTAGATTCTCGACGGCGTTGA 3019 Query 39855 AGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTT 39914 | || | | || | ||| ||| || || || || | || ||||| | Sbjct 3020 AAAGGAAGTCGCGCTCCTTTGAGTCTCTAATGTAGGTTTCAATGAGAAGCGAGTACATCT 3079 Query 39915 CTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTT 39974 | || |||| ||||| || || ||||| || || || || || | || || || | || Sbjct 3080 CGGAGTGGACATTTTCCATGGCGATCTGGAAGCCATAGAAGCAACGGGCCTCTGTGACTT 3139 Query 39975 GTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAA 40034 | || || | || | ||| | | || || || || || || || ||| || | Sbjct 3140 GCACTTCCTGGCTGAACCGTTCAACGAGGTTCTCGTTAACGATGCCGTCGGAAGCTGCGA 3199 Query 40035 AAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTG----TCAATTTATTCCAG 40090 | || |||| ||||| ||||||| || |||| |||| || |||||| Sbjct 3200 AGAAGGCCAGAACATGGGAGATAAAATGACGCTC----GGTGTCCTTCAAGTTGTTCCAG 3255 Query 40091 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCT 40148 || || || || ||||| | ||| |||||||| |||||||||| || || || |||| Sbjct 3256 TCGTTCATGTCCTTTGACAAATCGACTTCTTCCACTGTCCAAAATGAAGCTTCAGCCT 3313 >seq1280 Length=9399 Score = 96.9 bits (106), Expect = 5e-15 Identities = 580/923 (63%), Gaps = 16/923 (2%) Strand=Plus/Minus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 ||||| | || ||||| |||| || || | || ||||||||||||||||| | Sbjct 2687 GATCCTTCGTAGGTTTCGTAAGTACCGAGCTCTCTGGCGAGTTCACAACTTGCCTCAAGC 2628 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 || ||||| || || || ||||| |||| || || || | ||||| | | | ||| Sbjct 2627 GCGCCGTAGTAGATCGTCTCGAAGATCTGCTGGTTCAGCTTCTGTGCGTTTGGCGACTCG 2568 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 || |||||| | || || || || |||| || |||| || |||||||| || Sbjct 2567 AACGGATAACTCATCGTGATGAAAGCGTCGGCCAGGCCTTGAATGCCGATACCGATCGGG 2508 Query 69127 CTATGTCTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 69186 | ||| | | | || || | | ||| ||||| || || || || || | ||| || || Sbjct 2507 CGATGACGCATGTTCGATCGCTTAGCCTCTGGGATCGGGTAGTAGTTGACATCGATGATC 2448 Query 69187 TTATT-AAGAT--TTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATC--AA 69241 || || ||| | || ||| | | || || ||||| || || | || || || Sbjct 2447 TTGTTCAAGTTCTTTGTGAC-AGTC--TTGGTGACTTCCTTGAGCTTTTGGAAGTCGTAA 2391 Query 69242 ATCGTCCAT----CTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCT 69297 || | | | | |||||||| || | || | ||||| ||||| || || || Sbjct 2390 GTCTTGGCTGATGCGTTCACAAACATGTTGACAGCGATCGATGCCAGATTGCAGACGGCG 2331 Query 69298 ACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTC 69357 || || | | | ||| | || || || || || | || || || || Sbjct 2330 ACTTCGTCCTTGCTGGAATACTCGATGATTTCCGTGCACAAGTTGGAGCAACGAATGGTG 2271 Query 69358 CCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTA 69417 || | || ||||| || |||| ||| || ||||||||||| | || | || || Sbjct 2270 CCGACGTTCTGCTGGTTCGACTTTCGGTTGCAAGCGTCCTTGTACAACATGTAAGGCGTG 2211 Query 69418 CCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTC 69477 ||||| || | || || ||||| || | ||| | | | ||| || || | Sbjct 2210 CCAGTCTCGACTTGTGACTCGATGATGGCAAACCACAAGTCTTGAGCCTTGATCTGGCGG 2151 Query 69478 TTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACA 69537 |||||| || ||| ||| || | | ||||| || || ||||| Sbjct 2150 AGGTAACGGCCTTCGGCTTCGTATCTCTCGTACAACTTCTCGAACTCTTCGCCCCACGAG 2091 Query 69538 TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTT--AA 69595 || | | || ||||| | ||||||||||| ||||| || | | | ||| || Sbjct 2090 TCGTAGAGGCCTGGACAGCTGTGCGGACACATCAACGACCAGACTCCGT--TGCTTTCAA 2033 Query 69596 CTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTT 69655 | || ||| || | |||||||||||| | ||| || | || | | | | || Sbjct 2032 CGCGACGCATGAACAAATCGGGAATCCACAAAGCGTAGAACATGTCACGAGCACGAACTT 1973 Query 69656 CTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTT 69715 |||| || || || ||||| || |||||||| ||||| | | || ||||| || | Sbjct 1972 CTTCTTTGCCAGTGTTTTTCTTGAGATCGAGGAACTCGAAGACGTCGCCGTGCCACGGCT 1913 Query 69716 CTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAG 69775 | ||||| || || | | || ||||| || ||||| || || |||| || | || | Sbjct 1912 CGAGATAAATTGCGAAAGCACCTGGTCGCTTGTTTCCGCCTTGGTCTACATAGCGAGCGG 1853 Query 69776 TGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAA 69835 |||| || || || | || ||| |||| || || || || | || || || || | | Sbjct 1852 TGTTGTTGTAAACACGCAACATTGGAACAAGTCCGTTTGAGATCCCGTTGGTGCCGGCGA 1793 Query 69836 TATAACTTCCTCTTGCGCGAATA 69858 |||| |||| | ||||||||| Sbjct 1792 TATACGTTCCCTTGGCGCGAATA 1770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686865893959080