Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq596 143 2e-29
seq381 89.7 4e-13
>seq596
Length=46163
Score = 143 bits (158), Expect = 2e-29
Identities = 420/631 (67%), Gaps = 22/631 (3%)
Strand=Plus/Minus
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGC 43815
|| ||||||||||||| |||||||| |||||| | || ||| | | || | ||||
Sbjct 3305 GCTTCATTTTGGACAGTGGAAGAAGTCGATTTGTCAAAGGACAT-GAACGACTGGAACAA 3247
Query 43816 ATTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCG 43874
|| || ||| || |||||||| || ||| |||| || || || || ||
Sbjct 3246 CTTGAAGG-ACACCGAGCGTCATTTTATCTCCCATGTTCTGGCCTTCTTCGCAGCTTCCG 3188
Query 43875 ACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAG 43934
|||| || || || || || | ||| ||||| || ||||| ||| | |||| |
Sbjct 3187 ACGGCATCGTTAACGAGAACCTCGTTGAACGGTTCAGCCAGGAAGTGCAAGTCACAGAGG 3128
Query 43935 CACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTC 43994
| || || || ||||| || || || ||||| |||||| | || || || |||||| |
Sbjct 3127 CCCGTTGCTTCTATGGCTTCCAGATCGCCATGGAAAATGTCCACTCCGAGATGTACTCGC 3068
Query 43995 TTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTG----TTTAATGCG 44050
|||| || || || ||||| | ||| || || ||| ||| | || || ||
Sbjct 3067 TTCTCATTGAAACCTACATTAGAGACT--CAA-AGGAGCG-CGACTTCCTTTTCAACGCC 3012
Query 44051 ATAGAAACAGTACCTGCGATTAAACATAAAG-CAGACTGGGCCCTTAAATGGATA---AA 44106
| || | |||| | | |||| | |||| | ||||||||| | | ||||| |
Sbjct 3011 GTCGAGAATCTACC-GTGTGTAAAGAAAAAGGCTGACTGGGCCTTGGACTGGATCGCCAG 2953
Query 44107 TTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT 44166
|||| | | ||||||||||| || |||| ||||| | ||| ||||| ||||||||
Sbjct 2952 CACAAAGGCTAACTTTGGAGAACGCATTATCGCCTTTGCTGCTGTCGAAGGAATTTTCTT 2893
Query 44167 TTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGAC 44226
||| ||||| | || || ||| | ||||| || ||||||||||| || | ||
Sbjct 2892 CAGCGGAAGCTTTGCCTCAATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTCAC 2833
Query 44227 GTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286
|| ||||| || | || ||||| || ||||| || || || ||||||||| || |
Sbjct 2832 CTTCTCAAACGAACTCATCTCACGTGACGAGGGCTTGCACTGTGACTTTGCTTGCCTGAT 2773
Query 44287 ACTTGGATATCTAGGAGACGATAAGCCTTC-ATGTAAGACAATTACAGATATTGTTGTAG 44345
| || |||| || | ||||| | | | || | ||| || || | ||
Sbjct 2772 GTTCAGACATCT---TGAACAGAAGCCACCAAAGGAACGC-GTTATCGAGATCATCTCAG 2717
Query 44346 AGGCAGTAAAGATAGAACAAGAATTTATGAC 44376
|||| |||||||| |||||||| ||| ||||
Sbjct 2716 AGGCTGTAAAGATTGAACAAGAGTTTCTGAC 2686
>seq381
Length=74463
Score = 89.7 bits (98), Expect = 4e-13
Identities = 254/389 (65%), Gaps = 6/389 (2%)
Strand=Plus/Plus
Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488
|| || ||||| || || || | ||| | | || || || ||| | || |||| ||
Sbjct 62770 CCGAAGATTGTCAACGGCCCGCAGATCCTCGACAAGTACGTCGGTGAGTCTGAAGCGAAC 62829
Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT 19548
| || || | || || || || ||||||||| | || ||| | || | ||| || |
Sbjct 62830 ATCCGTCGACTCTTCGCCGAGGCAGAAGAAGAAGAGAAGCGTCTTGGACCCAACAGCGGT 62889
Query 19549 TTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTG---GT 19605
| ||||| || || | || ||| | ||||| || || ||| |||| |||| ||
Sbjct 62890 CTCCACATCATCATCTTCGACGAAATCGACGCTATTTGCAAGGCTCGAGGCTCTGTTGGT 62949
Query 19606 GTAAATG---GAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTT 19662
| | || | || || ||||| ||||| ||||| | || | || | ||||| ||
Sbjct 62950 GGCAGTGCCGGCGTGCACGACACGGTTGTGAATCAGTTGTTGGCCAAGATCGACGGCGTG 63009
Query 19663 AACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGC 19722
| || | || || || | || || |||||||| ||| | | || | || |||
Sbjct 63010 GAACAGTTAAACAACATCCTCGTCATCGGCATGACCAATCGTCGTGACATGATTGACGAG 63069
Query 19723 GCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGT 19782
|| | | ||||||||||| ||||| | | || ||||| | ||| ||| | |||
Sbjct 63070 GCGCTTCTCCGACCCGGTCGATTGGAGGTGCAAATGGAAATCAGCTTGCCCAACGAAGAA 63129
Query 19783 GGACGTGTGGAAATTTTAAACATACATAC 19811
|| |||||| | || || ||||| |||||
Sbjct 63130 GGTCGTGTGCAGATCTTGAACATTCATAC 63158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397431794556985
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |