Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03] 4,997 sequences; 89,583,723 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq596 143 2e-29 seq381 89.7 4e-13 >seq596 Length=46163 Score = 143 bits (158), Expect = 2e-29 Identities = 420/631 (67%), Gaps = 22/631 (3%) Strand=Plus/Minus Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGATTGC 43815 || ||||||||||||| |||||||| |||||| | || ||| | | || | |||| Sbjct 3305 GCTTCATTTTGGACAGTGGAAGAAGTCGATTTGTCAAAGGACAT-GAACGACTGGAACAA 3247 Query 43816 ATTAAAACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCG 43874 || || ||| || |||||||| || ||| |||| || || || || || Sbjct 3246 CTTGAAGG-ACACCGAGCGTCATTTTATCTCCCATGTTCTGGCCTTCTTCGCAGCTTCCG 3188 Query 43875 ACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAG 43934 |||| || || || || || | ||| ||||| || ||||| ||| | |||| | Sbjct 3187 ACGGCATCGTTAACGAGAACCTCGTTGAACGGTTCAGCCAGGAAGTGCAAGTCACAGAGG 3128 Query 43935 CACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTC 43994 | || || || ||||| || || || ||||| |||||| | || || || |||||| | Sbjct 3127 CCCGTTGCTTCTATGGCTTCCAGATCGCCATGGAAAATGTCCACTCCGAGATGTACTCGC 3068 Query 43995 TTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTG----TTTAATGCG 44050 |||| || || || ||||| | ||| || || ||| ||| | || || || Sbjct 3067 TTCTCATTGAAACCTACATTAGAGACT--CAA-AGGAGCG-CGACTTCCTTTTCAACGCC 3012 Query 44051 ATAGAAACAGTACCTGCGATTAAACATAAAG-CAGACTGGGCCCTTAAATGGATA---AA 44106 | || | |||| | | |||| | |||| | ||||||||| | | ||||| | Sbjct 3011 GTCGAGAATCTACC-GTGTGTAAAGAAAAAGGCTGACTGGGCCTTGGACTGGATCGCCAG 2953 Query 44107 TTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT 44166 |||| | | ||||||||||| || |||| ||||| | ||| ||||| |||||||| Sbjct 2952 CACAAAGGCTAACTTTGGAGAACGCATTATCGCCTTTGCTGCTGTCGAAGGAATTTTCTT 2893 Query 44167 TTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGAC 44226 ||| ||||| | || || ||| | ||||| || ||||||||||| || | || Sbjct 2892 CAGCGGAAGCTTTGCCTCAATCTTCTGGCTCAAGAAGCGCGGTTTGATGCCAGGTCTCAC 2833 Query 44227 GTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286 || ||||| || | || ||||| || ||||| || || || ||||||||| || | Sbjct 2832 CTTCTCAAACGAACTCATCTCACGTGACGAGGGCTTGCACTGTGACTTTGCTTGCCTGAT 2773 Query 44287 ACTTGGATATCTAGGAGACGATAAGCCTTC-ATGTAAGACAATTACAGATATTGTTGTAG 44345 | || |||| || | ||||| | | | || | ||| || || | || Sbjct 2772 GTTCAGACATCT---TGAACAGAAGCCACCAAAGGAACGC-GTTATCGAGATCATCTCAG 2717 Query 44346 AGGCAGTAAAGATAGAACAAGAATTTATGAC 44376 |||| |||||||| |||||||| ||| |||| Sbjct 2716 AGGCTGTAAAGATTGAACAAGAGTTTCTGAC 2686 >seq381 Length=74463 Score = 89.7 bits (98), Expect = 4e-13 Identities = 254/389 (65%), Gaps = 6/389 (2%) Strand=Plus/Plus Query 19429 CCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAAT 19488 || || ||||| || || || | ||| | | || || || ||| | || |||| || Sbjct 62770 CCGAAGATTGTCAACGGCCCGCAGATCCTCGACAAGTACGTCGGTGAGTCTGAAGCGAAC 62829 Query 19489 GTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT 19548 | || || | || || || || ||||||||| | || ||| | || | ||| || | Sbjct 62830 ATCCGTCGACTCTTCGCCGAGGCAGAAGAAGAAGAGAAGCGTCTTGGACCCAACAGCGGT 62889 Query 19549 TTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTG---GT 19605 | ||||| || || | || ||| | ||||| || || ||| |||| |||| || Sbjct 62890 CTCCACATCATCATCTTCGACGAAATCGACGCTATTTGCAAGGCTCGAGGCTCTGTTGGT 62949 Query 19606 GTAAATG---GAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTT 19662 | | || | || || ||||| ||||| ||||| | || | || | ||||| || Sbjct 62950 GGCAGTGCCGGCGTGCACGACACGGTTGTGAATCAGTTGTTGGCCAAGATCGACGGCGTG 63009 Query 19663 AACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGC 19722 | || | || || || | || || |||||||| ||| | | || | || ||| Sbjct 63010 GAACAGTTAAACAACATCCTCGTCATCGGCATGACCAATCGTCGTGACATGATTGACGAG 63069 Query 19723 GCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGT 19782 || | | ||||||||||| ||||| | | || ||||| | ||| ||| | ||| Sbjct 63070 GCGCTTCTCCGACCCGGTCGATTGGAGGTGCAAATGGAAATCAGCTTGCCCAACGAAGAA 63129 Query 19783 GGACGTGTGGAAATTTTAAACATACATAC 19811 || |||||| | || || ||||| ||||| Sbjct 63130 GGTCGTGTGCAGATCTTGAACATTCATAC 63158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397431794556985