Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Belgica_20antarctica_20[genbank_20GCA_5F000775305.1_202014-09-03]
4,997 sequences; 89,583,723 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq108 111 1e-19
seq29 98.7 8e-16
>seq108
Length=162490
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098
||||| || | || || || || ||||| ||||||||||||| |||| |||||||
Sbjct 111855 ACCAAGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGCTCAATGTGCGACCGTCTTCA 111914
Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158
||||| || || ||| | || |||||||| ||||| || || | || || || || |
Sbjct 111915 AGCTGCTTGCCAGCGAAGATCAGACGCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGG 111974
Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAACTTCTAGAGTTATAGATTT 27217
|||||| || | |||| | ||||| | |||| || || || || || || | ||
Sbjct 111975 ATCTTGGCCTTGACATTTTCAATTGTGTCCGATGGC-TCGACCTCGAGGGTGATGGTCTT 112033
Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247
||| || || |||||||| |||||||||||
Sbjct 112034 GCCGGTGAGGGTTTTCACGAAGATTTGCAT 112063
>seq29
Length=258594
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080
|| || |||| || | ||||| || | || || || ||||| || ||||||||||||
Sbjct 96649 CCACCACGCAGACGGAGGACCAAGTGAAGTGTCGACTCCTTTTGGATGTTGTAGTCGCTC 96590
Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140
| | || | ||||| | || || |||||| | || | ||||| || || || ||
Sbjct 96589 AGAGTACGTCCATCTTCCAATTGCTTTCCGGCGAAGATCAATCGCTGCTGGTCTGGGGGA 96530
Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTG-TGGCTTCAAC 27199
| || ||||| || ||||||| || | |||| | |||||| | ||||| ||||
Sbjct 96529 ATGCCTTCTTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCCGATGGCT-CAAC 96471
Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGC 27250
|| || || || | ||| ||||||| ||||| || ||||||||||| ||
Sbjct 96470 CTCGAGGGTAATGGTTTTACCCGTCAATGTTTTGACGAAGATTTGCATGGC 96420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424908521096664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |